BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012389
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-15
ref|XP_003594237.1| F-box protein [Medicago truncatula] gi|35548...    84   6e-14
ref|XP_003594238.1| F-box protein [Medicago truncatula] gi|35548...    84   6e-14
ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine...    81   3e-13
ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine...    81   3e-13

>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 84.7 bits (208), Expect(2) = 2e-15
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
 Frame = +3

Query: 3   NPSTRRHRILPQPLVARNPSGYTFNMGFAYNSIEKDY-VVVRLVVTARFQN-LCEVEIYS 176
           NPSTR  + LP+P  +    G+   +G  Y+S   DY +V+  + TA   + +   E+++
Sbjct: 127 NPSTRESKKLPKPSSSVQKHGFLTGLG--YDSTIDDYKLVIACLTTANGSHQIMAPEVFT 184

Query: 177 LRDNSWTRIQNISHTICRDNKGVVFFVGALHWLGVRSVDYLGIKVMPDIIIALDVMSKKF 356
           L+ NSW RIQ I   I  +    VF+ GALHWLG +     G     D+I +LDV  +KF
Sbjct: 185 LKTNSWRRIQGIHSGITLEGGAGVFWNGALHWLGKQET---GADHDVDVIFSLDVAQEKF 241

Query: 357 REFQLPQCEHINLEWKRMDYECWTSISILNGCLCI---MRENDIHYEVWVMKEY 509
             F +P   H           C   +SI   CLCI   +  ++ ++E W+  EY
Sbjct: 242 MGF-VPLPNHF----------CTAVLSISGNCLCIFGKLHPDESYFEAWITSEY 284



 Score = 24.3 bits (51), Expect(2) = 2e-15
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
 Frame = +1

Query: 598 SREIVLQKKGILC----------LYDPKHQSVRSVKTKPVLNGFTLGTTFVESLIPL 738
           S E+ L KKG+L           LYDP   + + ++ K   +       + ESL+ L
Sbjct: 307 STEMCLTKKGVLMDHHGCPGTLQLYDPVEDATKLLRVKNNRDPMYDSAVYTESLVSL 363


>ref|XP_003594237.1| F-box protein [Medicago truncatula] gi|355483285|gb|AES64488.1|
           F-box protein [Medicago truncatula]
          Length = 391

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
 Frame = +3

Query: 3   NPSTRRHRILPQ-PLVARNPSGYTFNM----GFAYNSIEKDYVVVRLVVTARFQNLC--- 158
           NP+ R+HRI+P  P   R+ S  T       GF Y+S   DY +VR+      QN     
Sbjct: 109 NPNIRKHRIIPYLPTTPRSESDTTLFAARVHGFGYDSFAGDYKLVRISYFVDLQNRSFDS 168

Query: 159 EVEIYSLRDNSWTRIQNISHTICRDNKGVVFFV-------GALHWLGVRSVDYLGIKVMP 317
           +V ++SL+ NSW  + ++++ +C      VF          +LHW+  R ++       P
Sbjct: 169 QVRVFSLKMNSWKELPSMNYALCCARTMGVFVEDSNNLNSNSLHWVVTRKLE----PFQP 224

Query: 318 DIIIALDVMSKKFREFQLPQCEHINLEWKRMDYECWTSISILNGCL-CIMRENDIHYEVW 494
           D+I+A ++  + F E  LP+   +N E +  + +    +++L GCL  I+       +VW
Sbjct: 225 DLIVAFNLTLEIFNEVPLPEIGEVNNESESFEID----VAVLGGCLSMIVNYQTTQIDVW 280

Query: 495 VMKEY 509
           VMKEY
Sbjct: 281 VMKEY 285


>ref|XP_003594238.1| F-box protein [Medicago truncatula] gi|355483286|gb|AES64489.1|
           F-box protein [Medicago truncatula]
          Length = 398

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
 Frame = +3

Query: 3   NPSTRRHRILPQ-PLVARNPSGYTFNM----GFAYNSIEKDYVVVRLVVTARFQNLC--- 158
           NP+ R+HRI+P  P   R+ S  T       GF Y+S   DY +VR+      QN     
Sbjct: 109 NPNIRKHRIIPYLPTTPRSESDTTLFAARVHGFGYDSFAGDYKLVRISYFVDLQNRSFDS 168

Query: 159 EVEIYSLRDNSWTRIQNISHTICRDNKGVVFFV-------GALHWLGVRSVDYLGIKVMP 317
           +V ++SL+ NSW  + ++++ +C      VF          +LHW+  R ++       P
Sbjct: 169 QVRVFSLKMNSWKELPSMNYALCCARTMGVFVEDSNNLNSNSLHWVVTRKLE----PFQP 224

Query: 318 DIIIALDVMSKKFREFQLPQCEHINLEWKRMDYECWTSISILNGCL-CIMRENDIHYEVW 494
           D+I+A ++  + F E  LP+   +N E +  + +    +++L GCL  I+       +VW
Sbjct: 225 DLIVAFNLTLEIFNEVPLPEIGEVNNESESFEID----VAVLGGCLSMIVNYQTTQIDVW 280

Query: 495 VMKEY 509
           VMKEY
Sbjct: 281 VMKEY 285


>ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 385

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
 Frame = +3

Query: 3   NPSTRRHRILPQPLVARNPSGYTFNM---GFAYNSIEKDYVVVRLVVTARFQNLC---EV 164
           NP  R+HRILP     R P    F     GF ++S   DY ++ +      Q      +V
Sbjct: 110 NPFLRKHRILPADRFHR-PQSSLFAARVYGFGHHSPSNDYKLLSITYFVDLQKRTFDSQV 168

Query: 165 EIYSLRDNSWTRIQNISHTICRDNKGVVFFVGALHWLGVRSVDYLGIKVMPDIIIALDVM 344
           ++Y+L+ +SW  + ++ + +C      VF  G+LHWL  R +        PD+I++ D+ 
Sbjct: 169 QLYTLKSDSWKNLPSMPYALCCARTMGVFVSGSLHWLVTRKLQ----PHEPDLIVSFDLT 224

Query: 345 SKKFREFQLPQCEHINLEWKRMDYECWTSISILNGCLCIMRENDIHYEVWVMKEY 509
            + F E  LP   + + + +         +++L GCLC++      ++VWVM+ Y
Sbjct: 225 RETFHEVPLPVTVNGDFDMQ---------VALLGGCLCVVEHRGTGFDVWVMRVY 270


>ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 382

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
 Frame = +3

Query: 3   NPSTRRHRILPQPLVARNPSGYTFNM---GFAYNSIEKDYVVVRLVVTARFQNLC---EV 164
           NP  R+HRILP     R P    F     GF ++    DY ++ +             +V
Sbjct: 110 NPFLRKHRILPSDRFHR-PESSLFAARVYGFGHHPPSNDYKLLSITYFVDLHKRTFDSQV 168

Query: 165 EIYSLRDNSWTRIQNISHTICRDNKGVVFFVGALHWLGVRSVDYLGIKVMPDIIIALDVM 344
           ++Y+L+ +SW  + ++ + +C      VF  G+LHWL  R +        PD+I+A D+ 
Sbjct: 169 QLYTLKSDSWKNLPSMPYALCCARTMGVFVSGSLHWLVTRKLQ----PDEPDLIVAFDLT 224

Query: 345 SKKFREFQLPQCEHINLEWKRMDYECWTSISILNGCLCIMRENDIHYEVWVMKEY 509
           S+ F E  LP   + N + +         +++L GCLC++      + VWVM+ Y
Sbjct: 225 SETFCEVPLPATVNGNFDMQ---------VALLGGCLCVVEHRGTGFHVWVMRVY 270