BLASTX nr result

ID: Coptis23_contig00012380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012380
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532583.1| vacuolar protein sorting 26, vps26, putative...   155   3e-36
gb|AFW56400.1| vacuolar protein sorting-like protein, mRNA [Zea ...   154   6e-36
ref|NP_001148716.1| vacuolar protein sorting homolog26 [Zea mays...   154   6e-36
gb|AFP55544.1| vacuolar protein sorting-associated [Rosa rugosa]      154   9e-36
ref|XP_003577325.1| PREDICTED: vacuolar protein sorting-associat...   153   1e-35

>ref|XP_002532583.1| vacuolar protein sorting 26, vps26, putative [Ricinus communis]
           gi|223527692|gb|EEF29800.1| vacuolar protein sorting 26,
           vps26, putative [Ricinus communis]
          Length = 301

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/78 (96%), Positives = 77/78 (98%)
 Frame = +2

Query: 2   NTYVETETLAKFELMDGAPVRGESIPTRLFLSPYELTPTYRNINNKFSVKYYLNLVLLDE 181
           NTYVETETLAKFELMDGAPVRGESIPTRLFLSPYELTPTYRNINNKFSVKYYLNLVL+DE
Sbjct: 222 NTYVETETLAKFELMDGAPVRGESIPTRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDE 281

Query: 182 EDRRYFKQQEITVYRLQE 235
           EDRRYFKQQEIT+YRL E
Sbjct: 282 EDRRYFKQQEITIYRLLE 299


>gb|AFW56400.1| vacuolar protein sorting-like protein, mRNA [Zea mays]
          Length = 139

 Score =  154 bits (390), Expect = 6e-36
 Identities = 74/79 (93%), Positives = 78/79 (98%)
 Frame = +2

Query: 2   NTYVETETLAKFELMDGAPVRGESIPTRLFLSPYELTPTYRNINNKFSVKYYLNLVLLDE 181
           NTYVETETLAKFELMDGAPVRGESIP RLFL+PYELTPTYRNINNKFSVKYYLNLVL+DE
Sbjct: 57  NTYVETETLAKFELMDGAPVRGESIPVRLFLTPYELTPTYRNINNKFSVKYYLNLVLVDE 116

Query: 182 EDRRYFKQQEITVYRLQET 238
           EDRRYFKQQEIT+YRLQE+
Sbjct: 117 EDRRYFKQQEITMYRLQES 135


>ref|NP_001148716.1| vacuolar protein sorting homolog26 [Zea mays]
           gi|194702350|gb|ACF85259.1| unknown [Zea mays]
           gi|195621626|gb|ACG32643.1| vacuolar protein sorting 26
           [Zea mays]
          Length = 304

 Score =  154 bits (390), Expect = 6e-36
 Identities = 74/79 (93%), Positives = 78/79 (98%)
 Frame = +2

Query: 2   NTYVETETLAKFELMDGAPVRGESIPTRLFLSPYELTPTYRNINNKFSVKYYLNLVLLDE 181
           NTYVETETLAKFELMDGAPVRGESIP RLFL+PYELTPTYRNINNKFSVKYYLNLVL+DE
Sbjct: 222 NTYVETETLAKFELMDGAPVRGESIPVRLFLTPYELTPTYRNINNKFSVKYYLNLVLVDE 281

Query: 182 EDRRYFKQQEITVYRLQET 238
           EDRRYFKQQEIT+YRLQE+
Sbjct: 282 EDRRYFKQQEITMYRLQES 300


>gb|AFP55544.1| vacuolar protein sorting-associated [Rosa rugosa]
          Length = 301

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/79 (93%), Positives = 78/79 (98%)
 Frame = +2

Query: 2   NTYVETETLAKFELMDGAPVRGESIPTRLFLSPYELTPTYRNINNKFSVKYYLNLVLLDE 181
           NT+VETETLAKFELMDGAPVRGESIP RLFLSPYELTPT+RNINNKFSVKYYLNLVL+DE
Sbjct: 222 NTHVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTHRNINNKFSVKYYLNLVLVDE 281

Query: 182 EDRRYFKQQEITVYRLQET 238
           EDRRYFKQQEIT+YRLQET
Sbjct: 282 EDRRYFKQQEITIYRLQET 300


>ref|XP_003577325.1| PREDICTED: vacuolar protein sorting-associated protein 26-like
           [Brachypodium distachyon]
          Length = 305

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/79 (92%), Positives = 78/79 (98%)
 Frame = +2

Query: 2   NTYVETETLAKFELMDGAPVRGESIPTRLFLSPYELTPTYRNINNKFSVKYYLNLVLLDE 181
           NTYVETETLAKFELMDGAPVRGESIP RLFL+PYELTPTYRNINNKFSVKYYLNLVL+DE
Sbjct: 222 NTYVETETLAKFELMDGAPVRGESIPVRLFLTPYELTPTYRNINNKFSVKYYLNLVLVDE 281

Query: 182 EDRRYFKQQEITVYRLQET 238
           EDRRYFKQQEIT++RL+ET
Sbjct: 282 EDRRYFKQQEITMFRLEET 300


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