BLASTX nr result
ID: Coptis23_contig00012369
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00012369
(1137 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31025.3| unnamed protein product [Vitis vinifera] 296 5e-78
ref|XP_002263657.1| PREDICTED: GDP-L-galactose phosphorylase 1-l... 292 9e-77
ref|NP_001067256.1| Os12g0612100 [Oryza sativa Japonica Group] g... 216 8e-54
dbj|BAJ89803.1| predicted protein [Hordeum vulgare subsp. vulgare] 213 9e-53
ref|XP_003577487.1| PREDICTED: GDP-L-galactose phosphorylase 1-l... 210 6e-52
>emb|CBI31025.3| unnamed protein product [Vitis vinifera]
Length = 376
Score = 296 bits (759), Expect = 5e-78
Identities = 163/339 (48%), Positives = 222/339 (65%), Gaps = 7/339 (2%)
Frame = +2
Query: 8 SLDSCAYGGIFNTL--EKQSXXXXXXXAQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQ 181
SLD G F+ + ++ S AQWEDR WKG++ YDVTT E+K+ G +KF+ Q
Sbjct: 42 SLDDSGPFGRFSCIPDDEPSTLESLLLAQWEDRMWKGIYRYDVTTSEIKIIGGRRKFLAQ 101
Query: 182 LNEERSVLNYLPVLKEKGVCHQLYPIIHNCKIPHMEEFLFAVTTGEKALPKLIQSSSVPE 361
LNEE + +++L E VC + I N + H EE LF V +GEKA+P+LI ++ VP
Sbjct: 102 LNEEWN-MDHLSDPDENEVCWRGDSFIFNW-VKHHEELLFCVASGEKAIPELIPTAPVP- 158
Query: 362 DVNLSIIINANPVDYGHVFLLPSGYCGLSRILDSRLLEMVTRFALEINNCSFRIFYDFSA 541
+ ++ ++ N PV+YGHVFL+P G+ +S+ +D+R LEMVTR A+E+NN SFR+FYD S
Sbjct: 159 NASILVLSNVTPVEYGHVFLVPHGFTSISQFMDARSLEMVTRVAMEVNNRSFRVFYDCSM 218
Query: 542 SNSNQQCVQACYLAIPLPVESMPVATLSGNWGERGLHISEVTDYPIKALSFKGYGNLKLL 721
+++ QACY + PLPVE MPV TL N G G I + DYPIKAL F+ N+K+
Sbjct: 219 PSASLY-FQACYFSNPLPVEVMPVVTLWDN-GLGGTRICSLIDYPIKALLFESKSNVKVS 276
Query: 722 VEVVSEICSCLQKLNNPYGLLITDFGTNMMLLPQNTRCS-----LSALECGGHFVFKTKD 886
VEV++EICSCLQ N PY LI+D G + L PQ R S LS+ EC GHFVFK+++
Sbjct: 277 VEVLAEICSCLQGKNIPYSFLISDCGKRIFLFPQQMRASANSHALSSWECSGHFVFKSRN 336
Query: 887 EFDQASEEALLKRLADASLGNEDFLSVKQLCCRIADQLS 1003
+FDQ +EEA+L+R+ ASL F VKQLCC IA +L+
Sbjct: 337 DFDQVTEEAMLERMGTASLDEPGFQVVKQLCCSIASKLA 375
>ref|XP_002263657.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Vitis vinifera]
Length = 375
Score = 292 bits (748), Expect = 9e-77
Identities = 161/338 (47%), Positives = 221/338 (65%), Gaps = 6/338 (1%)
Frame = +2
Query: 8 SLDSCAYGGIFNTL--EKQSXXXXXXXAQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQ 181
SLD G F+ + ++ S AQWEDR WKG++ YDVTT E+K+ G +KF+ Q
Sbjct: 42 SLDDSGPFGRFSCIPDDEPSTLESLLLAQWEDRMWKGIYRYDVTTSEIKIIGGRRKFLAQ 101
Query: 182 LNEERSVLNYLPVLKEKGVCHQLYPIIHNCKIPHMEEFLFAVTTGEKALPKLIQSSSVPE 361
LNEE + +++L E VC + I N + H EE LF V +GEKA+P+LI ++ VP
Sbjct: 102 LNEEWN-MDHLSDPDENEVCWRGDSFIFNW-VKHHEELLFCVASGEKAIPELIPTAPVP- 158
Query: 362 DVNLSIIINANPVDYGHVFLLPSGYCGLSRILDSRLLEMVTRFALEINNCSFRIFYDFSA 541
+ ++ ++ N PV+YGHVFL+P G+ +S+ +D+R LEMVTR A+E+NN SFR+FYD S
Sbjct: 159 NASILVLSNVTPVEYGHVFLVPHGFTSISQFMDARSLEMVTRVAMEVNNRSFRVFYDCSM 218
Query: 542 SNSNQQCVQACYLAIPLPVESMPVATLSGNWGERGLHISEVTDYPIKALSFKGYGNLKLL 721
+++ QACY + PLPVE MPV TL N G G I + DYPIKAL F+ N+K+
Sbjct: 219 PSASLY-FQACYFSNPLPVEVMPVVTLWDN-GLGGTRICSLIDYPIKALLFESKSNVKVS 276
Query: 722 VEVVSEICSCLQKLNNPYGLLITDFGTNMMLLPQNTRC----SLSALECGGHFVFKTKDE 889
VEV++EICSCLQ N PY LI+D G + L PQ +LS+ EC GHFVFK++++
Sbjct: 277 VEVLAEICSCLQGKNIPYSFLISDCGKRIFLFPQMRASANSHALSSWECSGHFVFKSRND 336
Query: 890 FDQASEEALLKRLADASLGNEDFLSVKQLCCRIADQLS 1003
FDQ +EEA+L+R+ ASL F VKQLCC IA +L+
Sbjct: 337 FDQVTEEAMLERMGTASLDEPGFQVVKQLCCSIASKLA 374
>ref|NP_001067256.1| Os12g0612100 [Oryza sativa Japonica Group] gi|77556583|gb|ABA99379.1|
VTC2, putative, expressed [Oryza sativa Japonica Group]
gi|113649763|dbj|BAF30275.1| Os12g0612100 [Oryza sativa
Japonica Group] gi|215678716|dbj|BAG95153.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222617464|gb|EEE53596.1| hypothetical protein
OsJ_36845 [Oryza sativa Japonica Group]
Length = 368
Score = 216 bits (550), Expect = 8e-54
Identities = 124/315 (39%), Positives = 177/315 (56%), Gaps = 9/315 (2%)
Frame = +2
Query: 83 AQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNYLPVLKEKGVCHQLYPII 262
+QWED AWKG F YDVT C +KV G FV QLN++ + VLKE H +
Sbjct: 62 SQWEDYAWKGHFGYDVTACNLKVVEGGWSFVVQLNDKWNSC----VLKE----HDKFLEP 113
Query: 263 HNCKIPHM----EEFLFAVTTGEKALPKLIQSSSVPEDVNLSIIINANPVDYGHVFLLPS 430
C P+ +E L + G+K +P+++ S+ P+D L +I NA PV+YGH+FL+PS
Sbjct: 114 VGCLKPNCMNSYDELLLCIAQGDKDIPEVVPSTKPPKD-GLLLIANAYPVEYGHIFLVPS 172
Query: 431 GYCGLSRILDSRLLEMVTRFALEINNCSFRIFYDFSASN-SNQQCVQACYLAIPLPVESM 607
LS D R+ ++ R A E+N+ +FR+F+D S + QACY A PLPVES
Sbjct: 173 ATNQLSFFWDKRMFSLIARIASEVNSAAFRVFFDSCTSTMPDHMFFQACYFANPLPVESA 232
Query: 608 PVATLSGNWGERGLHISEVTDYPIKALSFKGYGNLKLLVEVVSEICSCLQKLNNPYGLLI 787
+ +H+ E+ DYP+KAL G ++ L VSE+ L N Y LLI
Sbjct: 233 STVAIYHGKATSAVHLYEIIDYPMKALVLTG-KDVNTLANFVSEVSLTLHDNNTAYSLLI 291
Query: 788 TDFGTNMMLLPQ----NTRCSLSALECGGHFVFKTKDEFDQASEEALLKRLADASLGNED 955
++ GT + L PQ T C LSA EC G+F+++ K +FD+ASE + R+A +L +
Sbjct: 292 SNNGTKVFLFPQVKNLATGCCLSAWECSGYFIYRAKYDFDRASENEISNRMASVTLQDGA 351
Query: 956 FLSVKQLCCRIADQL 1000
F ++K LCC +AD L
Sbjct: 352 FENLKNLCCAVADDL 366
>dbj|BAJ89803.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 369
Score = 213 bits (541), Expect = 9e-53
Identities = 122/315 (38%), Positives = 181/315 (57%), Gaps = 9/315 (2%)
Frame = +2
Query: 83 AQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNYLPVLKEKGVCHQLYPII 262
+QWE+ A KG YDVTTCE+KV G + FV Q+N++ + + LK+ + + +
Sbjct: 63 SQWENFAQKGQLGYDVTTCELKVIEGQRDFVIQMNDKWNSFS----LKK----YDKFGLP 114
Query: 263 HNCKIPHM----EEFLFAVTTGEKALPKLIQSSSVPEDVNLSIIINANPVDYGHVFLLPS 430
C P+ EE L + GE + P+++ S++ P + + +I NA PV+YGH+FL+P+
Sbjct: 115 FGCLKPNSGRSYEELLLCIAEGENSEPEVVPSTTPPNN-GVLLIANAYPVEYGHIFLVPN 173
Query: 431 GYCGLSRILDSRLLEMVTRFALEINNCSFRIFYDFSASN-SNQQCVQACYLAIPLPVESM 607
LS D R+ ++T+ A E+N+ +FR+F+D S QACY A PLPVES
Sbjct: 174 ATNQLSSFWDKRMFGLITKIASEVNSAAFRVFFDDGTSIVPKHMFFQACYFANPLPVESA 233
Query: 608 PVATLSGNWGERGLHISEVTDYPIKALSFKGYGNLKLLVEVVSEICSCLQKLNNPYGLLI 787
L G+ +SE+ DYP+KA+ F N+ L++VVS C L + N + L+I
Sbjct: 234 STVALYDGTTRSGICVSEIVDYPLKAIVFTS-NNVNALIDVVSAACLALHENNTAHSLMI 292
Query: 788 TDFGTNMMLLPQN----TRCSLSALECGGHFVFKTKDEFDQASEEALLKRLADASLGNED 955
++ G N L PQ T C LSA EC G+FV+ TK +F+QASE + R+A S + D
Sbjct: 293 SNNGRNAFLFPQVKNLVTGCYLSAWECCGYFVYHTKVDFEQASETGISNRMASFSFQDGD 352
Query: 956 FLSVKQLCCRIADQL 1000
F +K+LCC IAD L
Sbjct: 353 FEDLKKLCCAIADDL 367
>ref|XP_003577487.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Brachypodium
distachyon]
Length = 369
Score = 210 bits (534), Expect = 6e-52
Identities = 123/310 (39%), Positives = 180/310 (58%), Gaps = 6/310 (1%)
Frame = +2
Query: 83 AQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNYLPVLKEKGVCHQ-LYPI 259
+QWE+ A +G YDVTTC++KV G + FV Q+N++ +LKE G Q L +
Sbjct: 63 SQWENFAREGHLGYDVTTCKLKVIEGERNFVVQMNDKWDSF----LLKEYGKFRQPLGCL 118
Query: 260 IHNCKIPHMEEFLFAVTTGEKALPKLIQSSSVPEDVNLSIIINANPVDYGHVFLLPSGYC 439
+C H EE L + GEK +P+++ S++ P + + +I NA PV+YGH+FL+PS
Sbjct: 119 KPDCTESH-EELLLCIAQGEKDVPEVVPSAT-PVNDGVLLIANAYPVEYGHIFLVPSATN 176
Query: 440 GLSRILDSRLLEMVTRFALEINNCSFRIFYDFSAS-NSNQQCVQACYLAIPLPVESMPVA 616
L+ D R+ ++ R A E+NN +FR+F+D S ++ +ACY A PLPVES
Sbjct: 177 QLTSFWDRRMFGLIMRSASEVNNAAFRVFFDDGTSIVPDRMFFEACYFANPLPVESASTV 236
Query: 617 TLSGNWGERGLHISEVTDYPIKALSFKGYGNLKLLVEVVSEICSCLQKLNNPYGLLITDF 796
+ G+ + E+ DYP+KAL F N+ LV VVSE+ S L + Y LLI++
Sbjct: 237 AIYDGKARSGIRVYEIVDYPLKALVFTS-NNVNALVNVVSEVSSTLHENKTAYSLLISNH 295
Query: 797 GTNMMLLPQN----TRCSLSALECGGHFVFKTKDEFDQASEEALLKRLADASLGNEDFLS 964
G N+ L PQ T C L A EC G+FV+ TK +FD+ASE + ++A S ++ F
Sbjct: 296 GRNVCLFPQAKSLVTGCCLPAWECCGYFVYGTKADFDKASETEISDKMASFSFQDDAFED 355
Query: 965 VKQLCCRIAD 994
+K LCC IAD
Sbjct: 356 LKNLCCAIAD 365