BLASTX nr result

ID: Coptis23_contig00012358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012358
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257...   195   2e-51
ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|2...   206   1e-50
gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indi...   197   6e-48
ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823...   187   7e-45
ref|XP_002516098.1| conserved hypothetical protein [Ricinus comm...   186   1e-44

>ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
            vinifera] gi|296081671|emb|CBI20676.3| unnamed protein
            product [Vitis vinifera]
          Length = 239

 Score =  195 bits (495), Expect(2) = 2e-51
 Identities = 100/167 (59%), Positives = 122/167 (73%), Gaps = 12/167 (7%)
 Frame = -2

Query: 1060 DTFAGLASHTAPGFSGLTSGASLKGFPSPLEDPALS----------SRGIPELLNERPSS 911
            D   G+     P   G T+  ++KG+P+P+EDP L           S GIP++  ERPSS
Sbjct: 67   DDIMGIRVPPKPVIGGFTATTNIKGYPNPVEDPNLIGQRRDVAHGISPGIPDI--ERPSS 124

Query: 910  LRKVDSVLG--EESSILFVDGLPSDCTRRELAHLFRPFIGFKELRLVHKEPRHSRDKAMV 737
               V+S+    +ES+ILFVDGLP DCTRRE+ HLFRPFIGFKE+R+VHKEPRHS DKAMV
Sbjct: 125  FGNVESLPPPVQESNILFVDGLPKDCTRREVGHLFRPFIGFKEIRVVHKEPRHSGDKAMV 184

Query: 736  LCFVEFSDAKCALTAMEALQGYKFDEKKPDAPILKIQFAQFPFCPPS 596
            LCFVEF+DA C+ TA+EALQGYKFD+KKPD+P L+IQFA FPF  PS
Sbjct: 185  LCFVEFNDASCSRTALEALQGYKFDDKKPDSPTLRIQFAHFPFRLPS 231



 Score = 35.0 bits (79), Expect(2) = 2e-51
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 1263 MGDSYWRYGAGAGVPERDGVPRASFPGYV 1177
            M D YWR GA +   +R  +PR+SFPGY+
Sbjct: 1    MADPYWRRGAPS---DRGSIPRSSFPGYL 26


>ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|222854516|gb|EEE92063.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  206 bits (524), Expect = 1e-50
 Identities = 104/160 (65%), Positives = 125/160 (78%), Gaps = 12/160 (7%)
 Frame = -2

Query: 1015 GLTSGASLKGFPSPLEDPAL-SSRG---------IPELLNERPSSLRKVDS--VLGEESS 872
            G   G++ KG+PSPLEDP+L S RG         IP+++N+RP SLR  D   V   ES+
Sbjct: 115  GAIPGSTGKGYPSPLEDPSLLSQRGDASVRVTAAIPDMINDRPGSLRSADGPPVPKGESN 174

Query: 871  ILFVDGLPSDCTRRELAHLFRPFIGFKELRLVHKEPRHSRDKAMVLCFVEFSDAKCALTA 692
            ILFVDGLP+DCTRRE+ HLFRPFIG+KE+R+VHKE R S D+A VLCFVEF+DA CA TA
Sbjct: 175  ILFVDGLPTDCTRREVGHLFRPFIGYKEIRVVHKEARKSGDRATVLCFVEFTDANCAATA 234

Query: 691  MEALQGYKFDEKKPDAPILKIQFAQFPFCPPSSRDDQRLG 572
            MEALQGYKFD+KKPD+P LKIQFA+FPF PPS RD +R+G
Sbjct: 235  MEALQGYKFDDKKPDSPTLKIQFARFPFRPPSDRDGKRIG 274


>gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indica Group]
          Length = 232

 Score =  197 bits (500), Expect = 6e-48
 Identities = 101/170 (59%), Positives = 124/170 (72%), Gaps = 8/170 (4%)
 Frame = -2

Query: 1063 LDTFAGLASHTAPGFSGLTSGASLKGFPSPLEDPALSSRG--------IPELLNERPSSL 908
            LD  AG +     G  GL +G + +G PSPLEDPAL  R         IP++  E P  L
Sbjct: 60   LDGAAGASHPALAGLGGLAAGTTARG-PSPLEDPALVRRSSSLGKTASIPDV--EHPRPL 116

Query: 907  RKVDSVLGEESSILFVDGLPSDCTRRELAHLFRPFIGFKELRLVHKEPRHSRDKAMVLCF 728
              +D    +ES+ILFVDGLP+DCTRRE+AHLFRPF+GFK++RLVHKEPRHS D+A VLCF
Sbjct: 117  LNLDGPREDESNILFVDGLPTDCTRREVAHLFRPFVGFKDIRLVHKEPRHSSDRAYVLCF 176

Query: 727  VEFSDAKCALTAMEALQGYKFDEKKPDAPILKIQFAQFPFCPPSSRDDQR 578
            VEFSDAKCA+TAMEALQ Y+FDE+KPDA +L I+FA+FPF P ++  D R
Sbjct: 177  VEFSDAKCAITAMEALQEYRFDERKPDAAVLNIKFARFPFRPAAAPHDDR 226


>ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823400 [Brachypodium
           distachyon]
          Length = 209

 Score =  187 bits (474), Expect = 7e-45
 Identities = 94/147 (63%), Positives = 114/147 (77%), Gaps = 8/147 (5%)
 Frame = -2

Query: 979 SPLEDPALSSRG--------IPELLNERPSSLRKVDSVLGEESSILFVDGLPSDCTRREL 824
           SPLED AL  R         IP++  ERP+ +  +D    +ES+ILFVDGLP+DC RRE+
Sbjct: 65  SPLEDQALVRRSSSLGRTATIPDI--ERPNPVLNIDRPSEDESNILFVDGLPTDCKRREV 122

Query: 823 AHLFRPFIGFKELRLVHKEPRHSRDKAMVLCFVEFSDAKCALTAMEALQGYKFDEKKPDA 644
           AHLFRPF+GFK+LRLVHKEPR S DKA VLCFVEF+DAKCA TAM+ALQ Y+FDE+KPDA
Sbjct: 123 AHLFRPFVGFKDLRLVHKEPRRSGDKAYVLCFVEFNDAKCAFTAMQALQEYRFDERKPDA 182

Query: 643 PILKIQFAQFPFCPPSSRDDQRLGDPR 563
           P+LKIQFA+FPF  P++ DD+RL   R
Sbjct: 183 PVLKIQFARFPFRLPAAHDDRRLPSAR 209


>ref|XP_002516098.1| conserved hypothetical protein [Ricinus communis]
            gi|223544584|gb|EEF46100.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 243

 Score =  186 bits (471), Expect = 1e-44
 Identities = 89/171 (52%), Positives = 125/171 (73%), Gaps = 16/171 (9%)
 Frame = -2

Query: 1027 PGFSGLTSGASLKGFPSPLEDPALSSR------------GIPELLNERPSSLRKVD---- 896
            P  SG+  GAS +G+ SPL DP+L S              IP+++N++P +  +++    
Sbjct: 73   PVRSGVIPGASSRGYLSPLNDPSLPSHRLRDTSVNVTTLAIPDVINDQPPNYLRINADSP 132

Query: 895  SVLGEESSILFVDGLPSDCTRRELAHLFRPFIGFKELRLVHKEPRHSRDKAMVLCFVEFS 716
            SV   ES+ILFVDGLP+DCTRRE+ HLFRPFIG+K+++++H+EPR   DKAMV CFVEF+
Sbjct: 133  SVSRTESNILFVDGLPTDCTRREVGHLFRPFIGYKDIKVIHREPRRDGDKAMVYCFVEFA 192

Query: 715  DAKCALTAMEALQGYKFDEKKPDAPILKIQFAQFPFCPPSSRDDQRLGDPR 563
            DAKCA+TAMEALQGYKFD+++ ++P+L+I  A+FPF PP  R++Q +  PR
Sbjct: 193  DAKCAITAMEALQGYKFDDRRSNSPVLRIHLARFPFRPPHDRNEQPVAIPR 243


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