BLASTX nr result

ID: Coptis23_contig00012356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012356
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546241.1| PREDICTED: cysteine desulfurase 2, chloropla...    69   5e-11
ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloropla...    68   1e-10
gb|ACU15091.1| unknown [Glycine max]                                   67   3e-10
ref|XP_004140178.1| PREDICTED: cysteine desulfurase 2, chloropla...    65   7e-10
gb|AAF22900.1|AC006932_17 T27G7.17 [Arabidopsis thaliana]              65   1e-09

>ref|XP_003546241.1| PREDICTED: cysteine desulfurase 2, chloroplastic-like [Glycine max]
          Length = 468

 Score = 69.3 bits (168), Expect(2) = 5e-11
 Identities = 33/42 (78%), Positives = 34/42 (80%)
 Frame = -3

Query: 127 NWCTWIKPTAVLDSLQNYYSTYNSNVHRGIHFLSARAADEYE 2
           N  T  KPTAVL +LQNYY  YNSNVHRGIHFLSARA DEYE
Sbjct: 83  NAATSQKPTAVLKALQNYYEAYNSNVHRGIHFLSARATDEYE 124



 Score = 22.7 bits (47), Expect(2) = 5e-11
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 146 RNVNKSKLVYLDKA 105
           + VN SKLVYLD A
Sbjct: 71  QEVNGSKLVYLDNA 84


>ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloroplastic [Vitis vinifera]
           gi|296083920|emb|CBI24308.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score = 68.2 bits (165), Expect(2) = 1e-10
 Identities = 32/42 (76%), Positives = 34/42 (80%)
 Frame = -3

Query: 127 NWCTWIKPTAVLDSLQNYYSTYNSNVHRGIHFLSARAADEYE 2
           N  T  KPTAVL +LQNYY  YNSNVHRGIHFLSA+A DEYE
Sbjct: 78  NAATSQKPTAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYE 119



 Score = 22.7 bits (47), Expect(2) = 1e-10
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 146 RNVNKSKLVYLDKA 105
           + VN SKLVYLD A
Sbjct: 66  QEVNGSKLVYLDNA 79


>gb|ACU15091.1| unknown [Glycine max]
          Length = 205

 Score = 66.6 bits (161), Expect(2) = 3e-10
 Identities = 31/42 (73%), Positives = 33/42 (78%)
 Frame = -3

Query: 127 NWCTWIKPTAVLDSLQNYYSTYNSNVHRGIHFLSARAADEYE 2
           N  T  KPT VL +LQNYY  YNSNVHRGIHFLSA+A DEYE
Sbjct: 83  NAATSQKPTTVLKALQNYYEAYNSNVHRGIHFLSAKATDEYE 124



 Score = 22.7 bits (47), Expect(2) = 3e-10
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 146 RNVNKSKLVYLDKA 105
           + VN SKLVYLD A
Sbjct: 71  QEVNGSKLVYLDNA 84


>ref|XP_004140178.1| PREDICTED: cysteine desulfurase 2, chloroplastic-like [Cucumis
           sativus] gi|449481029|ref|XP_004156061.1| PREDICTED:
           cysteine desulfurase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 485

 Score = 65.5 bits (158), Expect(2) = 7e-10
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = -3

Query: 127 NWCTWIKPTAVLDSLQNYYSTYNSNVHRGIHFLSARAADEYE 2
           N  T  KP +VL++LQNYY  YNSNVHRGIHFLSA+A DEYE
Sbjct: 100 NAATSQKPISVLNALQNYYQAYNSNVHRGIHFLSAKATDEYE 141



 Score = 22.7 bits (47), Expect(2) = 7e-10
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 146 RNVNKSKLVYLDKA 105
           + VN SKLVYLD A
Sbjct: 88  QEVNGSKLVYLDNA 101


>gb|AAF22900.1|AC006932_17 T27G7.17 [Arabidopsis thaliana]
          Length = 526

 Score = 64.7 bits (156), Expect(2) = 1e-09
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -3

Query: 109 KPTAVLDSLQNYYSTYNSNVHRGIHFLSARAADEYE 2
           KP AVLD+LQNYY  YNSNVHRGIH+LSA+A DE+E
Sbjct: 84  KPAAVLDALQNYYEFYNSNVHRGIHYLSAKATDEFE 119



 Score = 22.7 bits (47), Expect(2) = 1e-09
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 146 RNVNKSKLVYLDKA 105
           + VN SKLVYLD A
Sbjct: 66  QEVNGSKLVYLDSA 79


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