BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012346
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS80150.1| ACT11D09.4 [Cucumis melo]                              100   1e-19
ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19
ref|XP_003630728.1| Pentatricopeptide repeat-containing protein ...    96   2e-18

>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
          Length = 896

 Score =  100 bits (250), Expect = 1e-19
 Identities = 49/73 (67%), Positives = 57/73 (78%)
 Frame = -2

Query: 221 LLDRQFQMTPATCNVLLQTLLRNGKNEEATTLFQTMLDNHKTPNTHAVNSETFNIMVNEY 42
           LLDRQF+M PATCNVLL+ LL++ K  EA TLF  MLDNH  PN  AVNS+TFNIMVNE 
Sbjct: 311 LLDRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNEC 370

Query: 41  FRLGKVSEALTVF 3
           F+LGK +EA+  F
Sbjct: 371 FKLGKFTEAVETF 383


>ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Glycine max]
          Length = 861

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/73 (64%), Positives = 56/73 (76%)
 Frame = -2

Query: 221 LLDRQFQMTPATCNVLLQTLLRNGKNEEATTLFQTMLDNHKTPNTHAVNSETFNIMVNEY 42
           LLDRQF+MTPATCNVLL+ LL++ K+ EA +LF  MLDNH  PN  AVNS+TFNIMVN  
Sbjct: 285 LLDRQFRMTPATCNVLLEVLLKHSKSNEAWSLFHLMLDNHTPPNFQAVNSDTFNIMVNHC 344

Query: 41  FRLGKVSEALTVF 3
           F+LG   +AL  F
Sbjct: 345 FKLGNFEDALATF 357


>ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 559

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/73 (65%), Positives = 56/73 (76%)
 Frame = -2

Query: 221 LLDRQFQMTPATCNVLLQTLLRNGKNEEATTLFQTMLDNHKTPNTHAVNSETFNIMVNEY 42
           LLDRQF+M PATCNVLL+ LL++ K  EA TLF  MLDNH  PN  AVNS+TFNIMVNE 
Sbjct: 119 LLDRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNEC 178

Query: 41  FRLGKVSEALTVF 3
           F+ GK +EA+  F
Sbjct: 179 FKHGKFAEAVETF 191


>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 871

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/73 (65%), Positives = 56/73 (76%)
 Frame = -2

Query: 221 LLDRQFQMTPATCNVLLQTLLRNGKNEEATTLFQTMLDNHKTPNTHAVNSETFNIMVNEY 42
           LLDRQF+M PATCNVLL+ LL++ K  EA TLF  MLDNH  PN  AVNS+TFNIMVNE 
Sbjct: 285 LLDRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNEC 344

Query: 41  FRLGKVSEALTVF 3
           F+ GK +EA+  F
Sbjct: 345 FKHGKFAEAVETF 357


>ref|XP_003630728.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524750|gb|AET05204.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 918

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/72 (63%), Positives = 55/72 (76%)
 Frame = -2

Query: 218 LDRQFQMTPATCNVLLQTLLRNGKNEEATTLFQTMLDNHKTPNTHAVNSETFNIMVNEYF 39
           +DR+F+MTPATCNVLL+ LL++ K +EA  LF  MLDNH  PN  AVNS+TFNIMVNE F
Sbjct: 286 MDREFRMTPATCNVLLEVLLKHDKKKEAWKLFDQMLDNHTPPNFQAVNSDTFNIMVNECF 345

Query: 38  RLGKVSEALTVF 3
           + GK  EAL  F
Sbjct: 346 KHGKFDEALDTF 357