BLASTX nr result

ID: Coptis23_contig00012342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012342
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632426.1| PREDICTED: uncharacterized protein LOC100852...    90   8e-16
ref|NP_001237067.1| uncharacterized protein LOC100500374 [Glycin...    89   1e-15
ref|XP_002533464.1| conserved hypothetical protein [Ricinus comm...    89   1e-15
ref|XP_002312584.1| predicted protein [Populus trichocarpa] gi|2...    89   2e-15
ref|XP_002307642.1| predicted protein [Populus trichocarpa] gi|2...    88   3e-15

>ref|XP_003632426.1| PREDICTED: uncharacterized protein LOC100852749 [Vitis vinifera]
          Length = 205

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 22/209 (10%)
 Frame = -3

Query: 814 NIDKKLSPAKKAWKRFTSSVQKKLHKLKRSKAIKKTTE-----------RFSTTLGTVLG 668
           N+ K+L PA+KAW+ FT+ +Q KLHKL++SK+IKK T            R ST +     
Sbjct: 5   NLGKRLLPARKAWRNFTTKLQSKLHKLQKSKSIKKKTPCQRKAFKRTKYRTSTAVLRPSV 64

Query: 667 RSPSSARKEKKLSRPSSALRVGRNKQH-IRPSYKPVYVDELFMQHVMVQMTNKGHKKTKP 491
            S    + +K+L +P + L V   + H ++    PVYVDELF + +         K+ +P
Sbjct: 65  SSQPHLQHKKQLIQPPNTLAVQYRRSHVVQKRAAPVYVDELFNEPI--------SKEVEP 116

Query: 490 --SHIIDPGFSSVVCNFSSIKKKESKLLNQPSV--SESSKKKEMDIEKVTNG------EM 341
             +  +  G S           K  K+LNQP++    S ++ +   ++ T G       +
Sbjct: 117 LQTTAVAAGGSKGATARCPPSTKRMKVLNQPAMLPGSSQERGKCSSDQKTRGADEMWESV 176

Query: 340 GCSSTVTQLRGVDERAEEFITRFKEEMRR 254
           G +S +  + G+DERAEEFI RF+ ++ R
Sbjct: 177 GLASPL--MYGIDERAEEFIARFRADLAR 203


>ref|NP_001237067.1| uncharacterized protein LOC100500374 [Glycine max]
           gi|255630155|gb|ACU15431.1| unknown [Glycine max]
          Length = 180

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 65/208 (31%), Positives = 103/208 (49%)
 Frame = -3

Query: 826 MSRFNIDKKLSPAKKAWKRFTSSVQKKLHKLKRSKAIKKTTERFSTTLGTVLGRSPSSAR 647
           MSR  + KKL PAKKAWK F + VQ K+ KL   KAIK T +R   +L ++    PS AR
Sbjct: 1   MSRLRLGKKLQPAKKAWKSFFNKVQSKVQKLNIPKAIKATFKRLLASLHSLHHLIPSRAR 60

Query: 646 KEKKLSRPSSALRVGRNKQHIRPSYKPVYVDELFMQHVMVQMTNKGHKKTKPSHIIDPGF 467
             + L+  +  +       H + +   + +D+LF               T+P+       
Sbjct: 61  HRRSLASNNYHV-------HSKKNISVISIDDLF---------------TEPASSSSSSV 98

Query: 466 SSVVCNFSSIKKKESKLLNQPSVSESSKKKEMDIEKVTNGEMGCSSTVTQLRGVDERAEE 287
            +V  +    +   SK + +     SS     D+  + +      +   QL+ VD++AEE
Sbjct: 99  MNVHAHAHHGETSRSKEVKKDLAEGSS-----DMNTIEDAWKALVAKSPQLQ-VDQKAEE 152

Query: 286 FITRFKEEMRRQRQRSFGEFEEMLARSA 203
           FI++F+++MR Q++RS  EF EMLAR +
Sbjct: 153 FISKFRQDMRLQKERSLLEFHEMLARGS 180


>ref|XP_002533464.1| conserved hypothetical protein [Ricinus communis]
           gi|223526679|gb|EEF28916.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 207

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 7/213 (3%)
 Frame = -3

Query: 826 MSRFNIDKKLSPAKKAWKRFTSSVQKKLHKLKRSKAIKKTTERFSTTLGTVLGRSPSSAR 647
           M R ++ KKL PAKKAWKR   +V+ KL+    SKAI       +  L           +
Sbjct: 1   MQRSSLRKKLQPAKKAWKRLRKTVESKLNSFNFSKAINVIKNNSNRILSYCSLHFFRFFK 60

Query: 646 KEKKLSRPSSALR----VGRNKQHIRPSYKPVYVDELFMQHVMVQMTNK---GHKKTKPS 488
           K     RP+         G  KQ I  ++ P+Y+D+L+       +  K    + +T  S
Sbjct: 61  KRSITRRPTYFSHHYNFYGSKKQLIDKNFSPIYIDQLYSVEAESSLQAKKIVAYAETSSS 120

Query: 487 HIIDPGFSSVVCNFSSIKKKESKLLNQPSVSESSKKKEMDIEKVTNGEMGCSSTVTQLRG 308
                    V  +  +  +KE K           K+KE  +  + +      +   QLR 
Sbjct: 121 SSTSRRGKQVADDERASPRKEDKA--------KEKEKEKVLYSIEDAWREVVAKSPQLRP 172

Query: 307 VDERAEEFITRFKEEMRRQRQRSFGEFEEMLAR 209
           VD+RAEEFI+ F+++++ QR++S  EFEEMLAR
Sbjct: 173 VDDRAEEFISNFRQDIKIQREKSIVEFEEMLAR 205


>ref|XP_002312584.1| predicted protein [Populus trichocarpa] gi|222852404|gb|EEE89951.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 70/212 (33%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
 Frame = -3

Query: 826 MSRFNIDKKLSPAKKAWKRFTSSVQKKLHKLKRSKAIKKTTERFSTTLGTVLGRSPSSAR 647
           MSR  + KKL PAKKA KRF  ++Q KLH L  SKA+K         L     R     +
Sbjct: 1   MSRSRLAKKLQPAKKALKRFAKTLQSKLHDLNLSKAVKVIKTNTDRLLAYCSSRLFLPFK 60

Query: 646 KEKKLSRPSSALRVGR----NKQHIRPSYKPVYVDELFMQHVMVQMTNKGHKKTKPSHII 479
           K + +++P    R       NK  +  +  P+Y+D L+     +      H   + S   
Sbjct: 61  K-RSITKPRGRSRQCNHRYSNKTLLHNTLPPIYIDNLYASEPSLMSARHFHAHAETSS-- 117

Query: 478 DPGFSSVVCNFSSIKKKESKLLNQPSVSESSKKKEMDIEKVTNGEMGCSSTVTQLRGVDE 299
             G  +V      + +KE K         + KK    IE      +  S    QLR VDE
Sbjct: 118 --GGKAVTVE-KVVPRKEDK---------ARKKSVYSIEDAWREVVARSP---QLRPVDE 162

Query: 298 RAEEFITRFKEEMRRQRQRSFGEFEEMLARSA 203
           RAEEFI +F+EE++ Q+++S  E+EE LAR A
Sbjct: 163 RAEEFIYKFREEIKLQKEKSILEYEERLARGA 194


>ref|XP_002307642.1| predicted protein [Populus trichocarpa] gi|222857091|gb|EEE94638.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
 Frame = -3

Query: 811 IDKKLSPAKKAWKRFTSSVQKKLHKLKRSKAIKKTTERFSTTLGTVLGRSPSSARKEKKL 632
           ++ +L PAKK WK FTS  Q+KLHKL  SK+IKK+  R +  +           RK    
Sbjct: 4   LNLRLPPAKKVWKSFTSKFQRKLHKLNMSKSIKKSKYRTNNIINNTFDHKRDETRKRPAY 63

Query: 631 SRPSSALRVGRNK-QHIRPSYKPVYVDELFMQHVMVQMTNKGHKKTKPSHIIDPGFSSVV 455
            R +   +   ++  H      PVY+D+LF   V                      S +V
Sbjct: 64  QRRALPFKQRSSRFGHAHKKLAPVYIDKLFRGPVSA--------------------SELV 103

Query: 454 CNFSSIKKKESKLLNQPSVSESSKKKEMDIEKVTNGEMGCSS---------TVTQLRGVD 302
             F    K    L +Q + +       M ++++  GE GC++            Q++G+D
Sbjct: 104 AKFPPTTKTMKILDHQAATTVEPGGTSMGLDEIMRGERGCTADDMWESLGFASPQMQGID 163

Query: 301 ERAEEFITRFKEEMRRQ 251
           ERAE+FI  F+EEM  Q
Sbjct: 164 ERAEQFILTFREEMEIQ 180


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