BLASTX nr result
ID: Coptis23_contig00012325
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00012325
(599 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29824.3| unnamed protein product [Vitis vinifera] 207 1e-51
ref|XP_002284204.1| PREDICTED: ABC transporter A family member 1... 207 1e-51
emb|CAN66569.1| hypothetical protein VITISV_031181 [Vitis vinifera] 206 2e-51
ref|XP_003625137.1| ATP-binding cassette sub-family A member [Me... 199 4e-49
ref|XP_002529511.1| abc transporter, putative [Ricinus communis]... 197 1e-48
>emb|CBI29824.3| unnamed protein product [Vitis vinifera]
Length = 2001
Score = 207 bits (527), Expect = 1e-51
Identities = 120/201 (59%), Positives = 140/201 (69%), Gaps = 2/201 (0%)
Frame = +1
Query: 1 YTLTLVKSAPSASVAADIVHRHVPSATRLSDVGTEISFRLPLASSSSFESMFREIESCMI 180
YTLTLVKSAPSAS+AADIV+RHVPSAT +S+VGTEISF+LPL+SSSSFESMFREIESCM
Sbjct: 780 YTLTLVKSAPSASIAADIVYRHVPSATCVSEVGTEISFKLPLSSSSSFESMFREIESCMN 839
Query: 181 K-HTISETRRNNGVCFGIESYGISVTTLEEVFLRVARCDVEEIEHMEPDKDLVLPNSLDS 357
H + + GIESYGISVTTLEEVFLRVA CD +E E + +K VLP+S+ S
Sbjct: 840 SVHNSDRSGNEDKYNLGIESYGISVTTLEEVFLRVAGCDFDETECSKQEKLHVLPDSVVS 899
Query: 358 DVQHYSQIKASYTKILCGYYRKVLGAVFTIVKRSFCLIFTMVFGLLGFVQGLCCS-CIIP 534
K + G Y K++G V TIV+R+ LIF V + F CCS C I
Sbjct: 900 QASPNHAPKQIFHSKPLGKY-KIIGVVSTIVERACSLIFAAVLSFINFFSVQCCSCCFIS 958
Query: 535 RSTFWEHFKALLIKRAISARR 597
+S FWEH KALLIKRAI ARR
Sbjct: 959 KSIFWEHSKALLIKRAIIARR 979
>ref|XP_002284204.1| PREDICTED: ABC transporter A family member 1-like [Vitis vinifera]
Length = 1881
Score = 207 bits (527), Expect = 1e-51
Identities = 120/201 (59%), Positives = 140/201 (69%), Gaps = 2/201 (0%)
Frame = +1
Query: 1 YTLTLVKSAPSASVAADIVHRHVPSATRLSDVGTEISFRLPLASSSSFESMFREIESCMI 180
YTLTLVKSAPSAS+AADIV+RHVPSAT +S+VGTEISF+LPL+SSSSFESMFREIESCM
Sbjct: 780 YTLTLVKSAPSASIAADIVYRHVPSATCVSEVGTEISFKLPLSSSSSFESMFREIESCMN 839
Query: 181 K-HTISETRRNNGVCFGIESYGISVTTLEEVFLRVARCDVEEIEHMEPDKDLVLPNSLDS 357
H + + GIESYGISVTTLEEVFLRVA CD +E E + +K VLP+S+ S
Sbjct: 840 SVHNSDRSGNEDKYNLGIESYGISVTTLEEVFLRVAGCDFDETECSKQEKLHVLPDSVVS 899
Query: 358 DVQHYSQIKASYTKILCGYYRKVLGAVFTIVKRSFCLIFTMVFGLLGFVQGLCCS-CIIP 534
K + G Y K++G V TIV+R+ LIF V + F CCS C I
Sbjct: 900 QASPNHAPKQIFHSKPLGKY-KIIGVVSTIVERACSLIFAAVLSFINFFSVQCCSCCFIS 958
Query: 535 RSTFWEHFKALLIKRAISARR 597
+S FWEH KALLIKRAI ARR
Sbjct: 959 KSIFWEHSKALLIKRAIIARR 979
>emb|CAN66569.1| hypothetical protein VITISV_031181 [Vitis vinifera]
Length = 1206
Score = 206 bits (525), Expect = 2e-51
Identities = 120/202 (59%), Positives = 145/202 (71%), Gaps = 3/202 (1%)
Frame = +1
Query: 1 YTLTLVKSAPSASVAADIVHRHVPSATRLSDVGTEISFRLPLASSSSFESMFREIESCMI 180
YTLTLVKSAPSAS+AADIV+RHVPSAT +S+VGTEISF+LPL+SSSSFESMFREIESCM
Sbjct: 768 YTLTLVKSAPSASIAADIVYRHVPSATCVSEVGTEISFKLPLSSSSSFESMFREIESCMN 827
Query: 181 K-HTISETRRNNGVCFGIESYGISVTTLEEVFLRVARCDVEEIEHMEPDKDLVLPNSLDS 357
H + + GIESYGISVTTLEEVFLRVA CD +E E + +K VLP+S+ S
Sbjct: 828 SVHNSDRSGNEDKYNLGIESYGISVTTLEEVFLRVAGCDFDETECSKQEKLHVLPDSVVS 887
Query: 358 DVQ-HYSQIKASYTKILCGYYRKVLGAVFTIVKRSFCLIFTMVFGLLGFVQGLCCS-CII 531
+++ + ++K L Y K++G V TIV+R+ LIF V + F CCS C I
Sbjct: 888 QASPNHAPKQIFHSKPLRKY--KIIGVVSTIVERACSLIFAAVLSFINFFSVQCCSCCFI 945
Query: 532 PRSTFWEHFKALLIKRAISARR 597
+S FWEH KALLIKRAI ARR
Sbjct: 946 SKSIFWEHSKALLIKRAIIARR 967
>ref|XP_003625137.1| ATP-binding cassette sub-family A member [Medicago truncatula]
gi|355500152|gb|AES81355.1| ATP-binding cassette
sub-family A member [Medicago truncatula]
Length = 2142
Score = 199 bits (505), Expect = 4e-49
Identities = 116/205 (56%), Positives = 142/205 (69%), Gaps = 6/205 (2%)
Frame = +1
Query: 1 YTLTLVKSAPSASVAADIVHRHVPSATRLSDVGTEISFRLPLASSSSFESMFREIESCMI 180
YTLTLVKSAP+AS+A DIV+R+VP+AT +S+VGTEISFRLP+ASSS+FE MFREIESCM
Sbjct: 1025 YTLTLVKSAPTASIAGDIVYRYVPTATCISEVGTEISFRLPMASSSTFERMFREIESCMK 1084
Query: 181 KHTISETRRNNGVC----FGIESYGISVTTLEEVFLRVARCDVEEIEHMEP-DKDLVLPN 345
K S +G C GIESYGISVTTLEEVFLRVA CD +E E E ++ L+
Sbjct: 1085 KPVSS--MEISGNCEKDSHGIESYGISVTTLEEVFLRVAGCDYDEDECFEENNRSLISEA 1142
Query: 346 SLDSDVQHYSQIKASYTKILCGYYRKVLGAVFTIVKRSFCLIFTMVFGLLGFVQGLCCS- 522
+ K Y K+ CG Y+K+LG + T+V R+ LIF V + F+ CCS
Sbjct: 1143 VVSLPSNDRPSTKICYYKV-CGNYKKILGFMSTMVGRACGLIFATVISFVNFISLQCCSC 1201
Query: 523 CIIPRSTFWEHFKALLIKRAISARR 597
C+I STFW+H KAL+IKRAISARR
Sbjct: 1202 CLITTSTFWQHSKALIIKRAISARR 1226
>ref|XP_002529511.1| abc transporter, putative [Ricinus communis]
gi|223531027|gb|EEF32880.1| abc transporter, putative
[Ricinus communis]
Length = 1722
Score = 197 bits (501), Expect = 1e-48
Identities = 110/204 (53%), Positives = 145/204 (71%), Gaps = 5/204 (2%)
Frame = +1
Query: 1 YTLTLVKSAPSASVAADIVHRHVPSATRLSDVGTEISFRLPLASSSSFESMFREIESCMI 180
YTLTLVKSAP+ASVAADIV+RH+PSA +S+VGTE+SF+LPLASSS+FE+MFREIESCM
Sbjct: 669 YTLTLVKSAPTASVAADIVYRHIPSAICVSEVGTEVSFKLPLASSSAFENMFREIESCM- 727
Query: 181 KHTISETRRN---NGVCFGIESYGISVTTLEEVFLRVARCDVEEIEHMEPDKDLVLPNSL 351
++ +S ++ N GIESYGISVTTLEEVFLRVA CD +E + + +++ + +
Sbjct: 728 RNAVSNSQTNIMEEKNYIGIESYGISVTTLEEVFLRVAGCDCDETDGFKQSSNILSSDFM 787
Query: 352 DSDVQHYSQIKASYTKILCGYYRKVLGAVFTIVKRSFCLIFTMVFGLLGF--VQGLCCSC 525
+++ K +K+L G YRK++ + IV R+ L+ L+ F +Q CC C
Sbjct: 788 IPTAHNHAPEKILDSKML-GNYRKIISVISAIVGRACGLMVATFLSLINFLGMQCCCCCC 846
Query: 526 IIPRSTFWEHFKALLIKRAISARR 597
II RSTFW+H KAL IKRAISARR
Sbjct: 847 IISRSTFWQHTKALFIKRAISARR 870