BLASTX nr result

ID: Coptis23_contig00012317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012317
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|2...    58   1e-06

>ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|222850806|gb|EEE88353.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
 Frame = +2

Query: 50  YGVCGVSQGRIHYSWDDEKYNLMVWMLDESDRIGKWVLKYTLLLQDLAKYP--LPTVLDS 223
           YG  G+S+  + YS D     L  W+L++  + G+W L + + +  L K+   L  +  +
Sbjct: 271 YGCIGLSRRHLCYS-DLVGTALHFWLLEDRCKNGRWTLIHNIKVDFLGKHVHRLDRITIA 329

Query: 224 RLFSV-----FAFDPNSDVVFLGHSTGIFTYHPGSKKLKKVFQACYGAYLCCGSIYVFPY 388
           R   +     FA  P S+V+FLG    + +YHP  K+++ +++      +  G I VFPY
Sbjct: 330 RFGKISALRPFALHPTSEVIFLGTRGAMLSYHPKDKRVELIYRRKKDRQIIKGQISVFPY 389

Query: 389 T 391
           T
Sbjct: 390 T 390


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