BLASTX nr result

ID: Coptis23_contig00012313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012313
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK07429.1|AF321287_1 beta-glucosidase [Musa acuminata]            108   3e-22
gb|AEX13814.1| beta-glucosidase [Musa acuminata AAA Group]            108   3e-22
gb|ADE77294.1| unknown [Picea sitchensis]                             102   2e-20
ref|XP_002267595.2| PREDICTED: beta-glucosidase 11-like [Vitis v...   100   1e-19
emb|CBI36854.3| unnamed protein product [Vitis vinifera]              100   1e-19

>gb|AAK07429.1|AF321287_1 beta-glucosidase [Musa acuminata]
          Length = 551

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 23/143 (16%)
 Frame = +1

Query: 1   VYGRYPAVMRKIIGSRLPYFKENEQEQIKGSFDFIGLNHYCGFYVQDVPKSLDKYGRDYF 180
           VYG YP+VMR+ +GSRLP F+  E + ++GSFDFIGLNHY   +++      D+ GR+Y+
Sbjct: 299 VYGTYPSVMREFVGSRLPSFEPEESKMLRGSFDFIGLNHYVAVFLEAATYDPDESGREYY 358

Query: 181 RDMSAKSAF-----------------------TDGLQLRLTEGWAPDMKPDGMIVGWGLR 291
            DMS K A                        +DG Q    + +  D  P      W L+
Sbjct: 359 TDMSVKFAMPNIILTKVPPQTLPILKQTVRTSSDGNQ-NSRQDFVSDDAPTFPATPWALQ 417

Query: 292 RLLDYVKVNYNNPATFIHENGYP 360
           +LL+Y+KV Y NP   IHENGYP
Sbjct: 418 KLLEYMKVTYGNPPVLIHENGYP 440


>gb|AEX13814.1| beta-glucosidase [Musa acuminata AAA Group]
          Length = 548

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 23/143 (16%)
 Frame = +1

Query: 1   VYGRYPAVMRKIIGSRLPYFKENEQEQIKGSFDFIGLNHYCGFYVQDVPKSLDKYGRDYF 180
           VYG YP+VMR+ +GSRLP F+  E + ++GSFDFIGLNHY   +++      D+ GR+Y+
Sbjct: 296 VYGTYPSVMREFVGSRLPSFEPEESKMLRGSFDFIGLNHYVAVFLEAATYDPDESGREYY 355

Query: 181 RDMSAKSAF-----------------------TDGLQLRLTEGWAPDMKPDGMIVGWGLR 291
            DMS K A                        +DG Q    + +  D  P      W L+
Sbjct: 356 TDMSVKFAMPNIILTKVPPQTLPILKQTVRTSSDGNQ-NSRQDFVSDDAPTFPATPWALQ 414

Query: 292 RLLDYVKVNYNNPATFIHENGYP 360
           +LL+Y+KV Y NP   IHENGYP
Sbjct: 415 KLLEYMKVTYGNPPVLIHENGYP 437


>gb|ADE77294.1| unknown [Picea sitchensis]
          Length = 415

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
 Frame = +1

Query: 1   VYGRYPAVMRKIIGSRLPYFKENEQEQIKGSFDFIGLNHYCGFYVQDVPKS-LDKYGRDY 177
           +YG YP VMR+I+GSRLP   E +  +I+ SFDFIGLNHY   YV+D P +  + Y RDY
Sbjct: 203 IYGDYPKVMRQIVGSRLPLLTEKQSREIRQSFDFIGLNHYSTNYVEDAPAAHANNYERDY 262

Query: 178 FRDMSAK-SAFTDGLQLRLTEGWAPDMKPDGMIVGWGLRRLLDYVKVNYNNPATFIHENG 354
           F D+S + +   DG+ +    G    +K  G  V WG + LL+Y++ +Y NP   + E G
Sbjct: 263 FTDLSVRVTVERDGIPI----GQMSKIKGFGS-VPWGFQELLEYIRQHYGNPPVVVTECG 317

Query: 355 YP 360
           YP
Sbjct: 318 YP 319


>ref|XP_002267595.2| PREDICTED: beta-glucosidase 11-like [Vitis vinifera]
          Length = 512

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/118 (40%), Positives = 75/118 (63%)
 Frame = +1

Query: 1   VYGRYPAVMRKIIGSRLPYFKENEQEQIKGSFDFIGLNHYCGFYVQDVPKSLDKYGRDYF 180
           V+G YP +++K  G+R+P F E+E +Q+KGSFDFIG+NHY   ++++ P  L+   RD+ 
Sbjct: 294 VFGDYPDIVKKRAGTRIPSFTEDESKQVKGSFDFIGINHYTSLHIKNNPMKLNMDYRDFN 353

Query: 181 RDMSAKSAFTDGLQLRLTEGWAPDMKPDGMIVGWGLRRLLDYVKVNYNNPATFIHENG 354
            D++A         + + +  APD  P   ++ WGL++LL+Y K  Y NP  +IHENG
Sbjct: 354 ADVAAD-------MIAIIDDTAPDQFP---VLPWGLQQLLEYFKQVYGNPPIYIHENG 401


>emb|CBI36854.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/118 (40%), Positives = 75/118 (63%)
 Frame = +1

Query: 1   VYGRYPAVMRKIIGSRLPYFKENEQEQIKGSFDFIGLNHYCGFYVQDVPKSLDKYGRDYF 180
           V+G YP +++K  G+R+P F E+E +Q+KGSFDFIG+NHY   ++++ P  L+   RD+ 
Sbjct: 461 VFGDYPDIVKKRAGTRIPSFTEDESKQVKGSFDFIGINHYTSLHIKNNPMKLNMDYRDFN 520

Query: 181 RDMSAKSAFTDGLQLRLTEGWAPDMKPDGMIVGWGLRRLLDYVKVNYNNPATFIHENG 354
            D++A         + + +  APD  P   ++ WGL++LL+Y K  Y NP  +IHENG
Sbjct: 521 ADVAAD-------MIAIIDDTAPDQFP---VLPWGLQQLLEYFKQVYGNPPIYIHENG 568


Top