BLASTX nr result

ID: Coptis23_contig00012298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012298
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...   137   2e-30
emb|CAN68940.1| hypothetical protein VITISV_028995 [Vitis vinifera]   132   6e-29
ref|XP_002274845.1| PREDICTED: uncharacterized protein LOC100252...   130   2e-28
ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252...   130   3e-28
emb|CBI32246.3| unnamed protein product [Vitis vinifera]              129   8e-28

>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  137 bits (346), Expect = 2e-30
 Identities = 82/245 (33%), Positives = 126/245 (51%), Gaps = 3/245 (1%)
 Frame = -2

Query: 728 LQNPWLH*CHISKIITTEPRLLLASPENRLIPKLEYYNSIGLSGPNLGKLLSKDVHYLTR 549
           L+N       IS ++   P LLL++P N L+PKL+++ S+G+S P+L + LS D   LTR
Sbjct: 100 LRNHGFSRTQISSLVKKRPFLLLSNPTNTLLPKLDFFLSLGMSRPHLARTLSSDPTLLTR 159

Query: 548 SLQKRTIPSINFLRSFAPADSDMATILNRLKWS--TNIQDKIGKNIALLQDHGMPNSXXX 375
           SL+ + +PS NFL++   +D  + +   R  W    ++   +  N+ LL+  G+P S   
Sbjct: 160 SLENQIVPSYNFLKTILRSDEKIVSAFKRTTWIFLEDLSKNLIPNLELLRKVGVPQSC-- 217

Query: 374 XXXXXXXXXXXXXXXXXXXXXXXXXXXISKLIIKNPKVMYLVSDKLNENVAELKKMGFST 195
                                      IS L+   P+ M    ++ +ENV E++KMGF  
Sbjct: 218 ---------------------------ISLLLTHFPEAMMENHEEFSENVEEVRKMGFDP 250

Query: 194 SSKQIVTGLRVL-GGMKKSIWDSKLEAYKSFGWSEDEVLSMFKKQPPIMGASVKKINAAL 18
           +    V  +  L G   KSIW+   E YK +GW++D++LS F+K P  M  S KKI   L
Sbjct: 251 NKSTFVLAVHALCGKCNKSIWERCFEVYKRWGWTKDDILSAFRKHPHCMMLSEKKIMKGL 310

Query: 17  DFFMN 3
           DFF+N
Sbjct: 311 DFFVN 315


>emb|CAN68940.1| hypothetical protein VITISV_028995 [Vitis vinifera]
          Length = 379

 Score =  132 bits (333), Expect = 6e-29
 Identities = 73/235 (31%), Positives = 123/235 (52%), Gaps = 2/235 (0%)
 Frame = -2

Query: 701 HISKIITTEPRLLLASPENRLIPKLEYYNSIGLSGPNLGKLLSKDVHYLTRSLQKRTIPS 522
           HI KI++  P L    PE  L+PKLE++ S+G SGP++  +LS + + L R LQ   IP+
Sbjct: 77  HIXKIVSKYPALFTTDPEKTLLPKLEFFRSVGFSGPDIAGILSSNPYILKRGLQNNLIPT 136

Query: 521 INFLRSFAPADSDMATILNRLKWST--NIQDKIGKNIALLQDHGMPNSXXXXXXXXXXXX 348
             FL+S    + ++  +L +  W T  ++Q  I  NIA+L + G+P S            
Sbjct: 137 YTFLKSVVMVNENVVRVLRKTHWITVQSVQKAITPNIAILTEIGVPMS------------ 184

Query: 347 XXXXXXXXXXXXXXXXXXISKLIIKNPKVMYLVSDKLNENVAELKKMGFSTSSKQIVTGL 168
                             I  L+  +P  +    +K + +V ++ +MGF       +  +
Sbjct: 185 -----------------NILFLVTCHPNAVIQNREKFSTSVKKVXEMGFDPLKVSFLKAV 227

Query: 167 RVLGGMKKSIWDSKLEAYKSFGWSEDEVLSMFKKQPPIMGASVKKINAALDFFMN 3
           +V+ GM +SIW+ ++E YK +G ++DE++SMF+  P  M +S KKI + +DF +N
Sbjct: 228 QVICGMGESIWEQRMEVYKRWGLTDDEIMSMFRLDPLCMRSSEKKIMSVMDFLVN 282


>ref|XP_002274845.1| PREDICTED: uncharacterized protein LOC100252802 [Vitis vinifera]
          Length = 399

 Score =  130 bits (328), Expect = 2e-28
 Identities = 76/234 (32%), Positives = 118/234 (50%), Gaps = 2/234 (0%)
 Frame = -2

Query: 698 ISKIITTEPRLLLASPENRLIPKLEYYNSIGLSGPNLGKLLSKDVHYLTRSLQKRTIPSI 519
           ISKI+ + PRLL + P+  L+PKL+++ S G S P++ K++      L RSL+ + IPS 
Sbjct: 99  ISKIVKSLPRLLASDPDKTLLPKLQFFYSKGASRPDVAKIVVSTPGILYRSLENQIIPSF 158

Query: 518 NFLRSFAPADSDMATILNRLKWST--NIQDKIGKNIALLQDHGMPNSXXXXXXXXXXXXX 345
           NF + F  +D    T++ R       ++   +  NI  LQ+ G+P S             
Sbjct: 159 NFFKDFLQSDEMAITVIKRFSRILLFDLHTYVASNINALQEFGVPKSN------------ 206

Query: 344 XXXXXXXXXXXXXXXXXISKLIIKNPKVMYLVSDKLNENVAELKKMGFSTSSKQIVTGLR 165
                            I+ L++  P    +  +   EN+ E+KKMGF+ S  + V  + 
Sbjct: 207 -----------------IAGLLMNRPMAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAIH 249

Query: 164 VLGGMKKSIWDSKLEAYKSFGWSEDEVLSMFKKQPPIMGASVKKINAALDFFMN 3
            +  M KS W+ K++AYK +GWSE+E+   F K P  M  S  KI A +DFF+N
Sbjct: 250 AMRAMGKSTWERKIDAYKRWGWSEEEIRLAFIKLPRCMTHSEDKIMATMDFFVN 303


>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
          Length = 365

 Score =  130 bits (326), Expect(2) = 3e-28
 Identities = 75/236 (31%), Positives = 122/236 (51%), Gaps = 3/236 (1%)
 Frame = -2

Query: 701 HISKIITTEPRLLLASPENRLIPKLEYYNSIGLSGPNLGKLLSKDVHYLTRSLQKRTIPS 522
           HI+ I++  P LLLA+P   L PKL++ ++ G+SG +L  ++S +   L RSLQ + IP 
Sbjct: 75  HIATIVSKLPSLLLANPVKTLAPKLQFLSNNGVSGSSLVNIVSTNPVILRRSLQNQIIPC 134

Query: 521 INFLRSFAPADSDMATILN--RLKWST-NIQDKIGKNIALLQDHGMPNSXXXXXXXXXXX 351
           I+FL+   P D  +A++L   R  W      +++  NI  L+ HG+P S           
Sbjct: 135 ISFLKKVLPTDHKIASLLTAKRGTWVVYKFSEQMVPNIETLRSHGVPESN---------- 184

Query: 350 XXXXXXXXXXXXXXXXXXXISKLIIKNPKVMYLVSDKLNENVAELKKMGFSTSSKQIVTG 171
                              I +++I  P+ +   +D+    +  +K+MGF       + G
Sbjct: 185 -------------------ILRMLILRPRTLSFNADEFKAILKRVKEMGFDEKGMMFIHG 225

Query: 170 LRVLGGMKKSIWDSKLEAYKSFGWSEDEVLSMFKKQPPIMGASVKKINAALDFFMN 3
           +  L GMKK+ W+SK+  ++SFGW E+E +++F KQP  M  S  +I   LDF +N
Sbjct: 226 MCALCGMKKAKWESKVSVFRSFGWGEEEFIALFVKQPQFMSNSETRIRKCLDFLIN 281



 Score = 21.2 bits (43), Expect(2) = 3e-28
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 742 SVLTLFKTHGFT 707
           SV+ LFK++GFT
Sbjct: 61  SVVQLFKSYGFT 72


>emb|CBI32246.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score =  129 bits (323), Expect = 8e-28
 Identities = 74/235 (31%), Positives = 125/235 (53%), Gaps = 2/235 (0%)
 Frame = -2

Query: 701 HISKIITTEPRLLLASPENRLIPKLEYYNSIGLSGPNLGKLLSKDVHYLTRSLQKRTIPS 522
           HISKI++  P LL A+PE  L+PKLE++ S+G SGP+L  ++      L RSL+   IP+
Sbjct: 96  HISKIVSKYPLLLTANPEKTLLPKLEFFRSVGFSGPDLAGIIVAKPSILKRSLENHVIPN 155

Query: 521 INFLRSFAPADSDMATILNRLKWST--NIQDKIGKNIALLQDHGMPNSXXXXXXXXXXXX 348
            NFL+S    + ++A  L R  W T  ++Q+    NIA L++ G+P S            
Sbjct: 156 YNFLKSVGMINENIARALRRTYWLTGQSVQNTNVPNIATLKEIGVPMS------------ 203

Query: 347 XXXXXXXXXXXXXXXXXXISKLIIKNPKVMYLVSDKLNENVAELKKMGFSTSSKQIVTGL 168
                             IS  +  +P  +    +K + NV ++ +MGF       +  +
Sbjct: 204 -----------------NISFFLTCHPSAVSQNKEKFSTNVKKVIEMGFDPLRVTFLKAV 246

Query: 167 RVLGGMKKSIWDSKLEAYKSFGWSEDEVLSMFKKQPPIMGASVKKINAALDFFMN 3
           R++ GM +S+W+ K+E Y+ +G+++DE++ M +  P  M +S +KI + +DF +N
Sbjct: 247 RLICGMGESMWEHKMEVYRRWGFTDDEIMLMIRLDPLCMTSSERKIMSVMDFLVN 301


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