BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012296
         (1237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vit...   244   2e-69
emb|CBI40211.3| unnamed protein product [Vitis vinifera]              214   1e-60
ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|2...   230   3e-60
ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like...   227   5e-60
ref|XP_003556277.1| PREDICTED: RING-H2 finger protein ATL1-like ...   228   2e-59

>ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vitis vinifera]
          Length = 228

 Score =  244 bits (622), Expect(2) = 2e-69
 Identities = 120/177 (67%), Positives = 138/177 (77%)
 Frame = -2

Query: 1023 MIGTGINLVMTVIGFAVSTMFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHG 844
            MI  G+NLVMTVIGFAVSTMFIVFVCTRL+CARIQ+NASRRSFP AS S+L +LERG+HG
Sbjct: 1    MISGGVNLVMTVIGFAVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGLHG 60

Query: 843  LEPAVYAXXXXXXXXXXXXXXXEAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQ 664
            LEPAV A               E AQCTVCL +YQ +D+LRILPYCGH FHV CIDIWLQ
Sbjct: 61   LEPAVVANFPTKKFADEFFSPAEDAQCTVCLVEYQAEDILRILPYCGHFFHVTCIDIWLQ 120

Query: 663  QNSTCPICRISLRDSPERKRIMQPMFSSAIRSSHSMTPRYSHSYHFSYTSQGYSSRS 493
            Q+STCP+CRISL + PERK +MQPMFSSA+RS   M  R +HSY+   T +G+SSRS
Sbjct: 121  QHSTCPVCRISLWEFPERKCLMQPMFSSAVRSHFGMESRNTHSYNCLSTGRGFSSRS 177



 Score = 46.6 bits (109), Expect(2) = 2e-69
 Identities = 25/54 (46%), Positives = 33/54 (61%)
 Frame = -3

Query: 485 DNRRMEPIQEDQFALDLNSAEARGNFTSFPEVNQALKDIGLGESDNKLVDSPSN 324
           DN RM+PIQEDQF    + AEA+ +     + NQ  KD     S+NK ++SPSN
Sbjct: 179 DNHRMDPIQEDQFGPGGDGAEAQESTLPLTDANQPAKD-----SENKHIESPSN 227


>emb|CBI40211.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score =  214 bits (545), Expect(2) = 1e-60
 Identities = 104/158 (65%), Positives = 121/158 (76%)
 Frame = -2

Query: 966 MFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHGLEPAVYAXXXXXXXXXXXX 787
           MFIVFVCTRL+CARIQ+NASRRSFP AS S+L +LERG+HGLEPAV A            
Sbjct: 1   MFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGLHGLEPAVVANFPTKKFADEFF 60

Query: 786 XXXEAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQQNSTCPICRISLRDSPERK 607
              E AQCTVCL +YQ +D+LRILPYCGH FHV CIDIWLQQ+STCP+CRISL + PERK
Sbjct: 61  SPAEDAQCTVCLVEYQAEDILRILPYCGHFFHVTCIDIWLQQHSTCPVCRISLWEFPERK 120

Query: 606 RIMQPMFSSAIRSSHSMTPRYSHSYHFSYTSQGYSSRS 493
            +MQPMFSSA+RS   M  R +HSY+   T +G+SSRS
Sbjct: 121 CLMQPMFSSAVRSHFGMESRNTHSYNCLSTGRGFSSRS 158



 Score = 46.6 bits (109), Expect(2) = 1e-60
 Identities = 25/54 (46%), Positives = 33/54 (61%)
 Frame = -3

Query: 485 DNRRMEPIQEDQFALDLNSAEARGNFTSFPEVNQALKDIGLGESDNKLVDSPSN 324
           DN RM+PIQEDQF    + AEA+ +     + NQ  KD     S+NK ++SPSN
Sbjct: 160 DNHRMDPIQEDQFGPGGDGAEAQESTLPLTDANQPAKD-----SENKHIESPSN 208


>ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|222850859|gb|EEE88406.1|
            predicted protein [Populus trichocarpa]
          Length = 226

 Score =  230 bits (586), Expect(2) = 3e-60
 Identities = 117/177 (66%), Positives = 132/177 (74%)
 Frame = -2

Query: 1023 MIGTGINLVMTVIGFAVSTMFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHG 844
            MI +GINLVMTVIGF VSTMFIVFVCTRL+CARIQMNASRR+FP AS SNL LLERG  G
Sbjct: 1    MIASGINLVMTVIGFGVSTMFIVFVCTRLLCARIQMNASRRAFPIASRSNLSLLERG--G 58

Query: 843  LEPAVYAXXXXXXXXXXXXXXXEAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQ 664
            LE    A               E AQCT+CLA+Y   D+LRILPYCGHSFHV CIDIWLQ
Sbjct: 59   LEHVFLANFPTKKYNDKIFSASEDAQCTICLAEYHGDDILRILPYCGHSFHVTCIDIWLQ 118

Query: 663  QNSTCPICRISLRDSPERKRIMQPMFSSAIRSSHSMTPRYSHSYHFSYTSQGYSSRS 493
            Q+STCP+CRISLR+ PE+KR+MQP+FSSAIRS +      SHSY++  T  G S RS
Sbjct: 119  QHSTCPVCRISLREFPEKKRVMQPLFSSAIRSRNGTETFDSHSYNYMLTEHGISPRS 175



 Score = 29.6 bits (65), Expect(2) = 3e-60
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 494 RFIDNRRMEPIQEDQFALDLNSAEARGNFTSFPEVNQALKDIGLGESDNKLVDSPSN 324
           R  +N   +PIQ++  A   +  E   N     E NQ  KDI      +K V+SPSN
Sbjct: 174 RSYNNHGTDPIQDNHCASGGDEEEGGENSPPLTESNQIAKDIA-----DKHVESPSN 225


>ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like [Glycine max]
          Length = 229

 Score =  227 bits (578), Expect(2) = 5e-60
 Identities = 110/177 (62%), Positives = 132/177 (74%)
 Frame = -2

Query: 1023 MIGTGINLVMTVIGFAVSTMFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHG 844
            MI +GINLVMTVIGFAVSTMFIVFVCTRLICARI +NA+RRSFP AS SNL ++ERG HG
Sbjct: 1    MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIHLNAARRSFPIASRSNLSMMERGCHG 60

Query: 843  LEPAVYAXXXXXXXXXXXXXXXEAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQ 664
            LE    A               E +QCTVCL++YQ +D+LRILPYCGHSFHV CID+WLQ
Sbjct: 61   LERVTVAKFPTKKYSDKFFAAAENSQCTVCLSEYQGEDMLRILPYCGHSFHVTCIDLWLQ 120

Query: 663  QNSTCPICRISLRDSPERKRIMQPMFSSAIRSSHSMTPRYSHSYHFSYTSQGYSSRS 493
            QNSTCP+CRISLR+ P+RKR+MQP+FSSA++  + +    +  YH      G SSR+
Sbjct: 121  QNSTCPVCRISLREFPDRKRLMQPLFSSALQPHYDIESFDNRHYHCMIADNGLSSRT 177



 Score = 32.0 bits (71), Expect(2) = 5e-60
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = -3

Query: 485 DNRRMEPIQEDQFALDLNSAEARGNFTSFPEVNQALKDIGLGESDNKLVDSPSN 324
           DN  + PI+ED F  + + A A  N T   E    +KD G      K V+SPSN
Sbjct: 179 DNHAVNPIEEDHFPSEGDGAVAMDNITCLSE-GDFIKDEG-----KKHVESPSN 226


>ref|XP_003556277.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
          Length = 229

 Score =  228 bits (581), Expect(2) = 2e-59
 Identities = 111/177 (62%), Positives = 131/177 (74%)
 Frame = -2

Query: 1023 MIGTGINLVMTVIGFAVSTMFIVFVCTRLICARIQMNASRRSFPTASTSNLDLLERGIHG 844
            MI +GINLVMTVIGFAVSTMFIVFVCTRLICARI MN +RRSFP AS SNL ++ERG HG
Sbjct: 1    MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIHMNTARRSFPIASRSNLSMMERGCHG 60

Query: 843  LEPAVYAXXXXXXXXXXXXXXXEAAQCTVCLADYQEKDVLRILPYCGHSFHVACIDIWLQ 664
            LE    A               E +QCTVCL++YQ +D+LRILPYCGHSFHV CID+WLQ
Sbjct: 61   LERVTVAKFPTKKYSDKFFAAAENSQCTVCLSEYQGEDMLRILPYCGHSFHVTCIDLWLQ 120

Query: 663  QNSTCPICRISLRDSPERKRIMQPMFSSAIRSSHSMTPRYSHSYHFSYTSQGYSSRS 493
            QNSTCP+CRISLR+ PERK +MQP+FSSA++  + +    +H YH      G SSR+
Sbjct: 121  QNSTCPVCRISLREFPERKLLMQPLFSSALQPHYGIESFDTHHYHCMMADNGLSSRT 177



 Score = 28.9 bits (63), Expect(2) = 2e-59
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 485 DNRRMEPIQEDQFALDLNSAEARGNFTSFPEVNQALKDIGLGESDNKLVDSPSN 324
           DN  + PI+ED F  +   A A  N T   E +       + E   K V+SPSN
Sbjct: 179 DNLGVNPIEEDHFPSEGGGAVAMDNITCLSEGD------FIKEEGKKHVESPSN 226