BLASTX nr result

ID: Coptis23_contig00012282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012282
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC55236.1| TT12a [Gossypium arboreum]                             201   3e-49
emb|CBI22061.3| unnamed protein product [Vitis vinifera]              189   6e-46
ref|XP_002282907.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   189   6e-46
ref|XP_003545155.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   189   1e-45
ref|XP_002307571.1| predicted protein [Populus trichocarpa] gi|2...   187   3e-45

>gb|AGC55236.1| TT12a [Gossypium arboreum]
          Length = 506

 Score =  201 bits (510), Expect = 3e-49
 Identities = 106/187 (56%), Positives = 127/187 (67%), Gaps = 1/187 (0%)
 Frame = -2

Query: 941 SFAICINYFNLDLTFMLGLSTAAIIRVGTEIGSAHPRVAKFSAIVVNATSILISIIFSAI 762
           S +IC+NY N D+ FMLGLS AA +RV  E+G+ HPRVAKFS  VVN TSILISI+FSAI
Sbjct: 312 SISICMNYLNWDMQFMLGLSAAASVRVSNELGAGHPRVAKFSVFVVNGTSILISIVFSAI 371

Query: 761 VLAFGPALGRAFINNEEVLKAVSDFTPLLAISIFLNGVEPILSGVGIGIGRPGLVILFYG 582
           VL F   L +AF ++ EV++AVSD TPLLAIS+FLNG++PILSGV IG G   +V     
Sbjct: 372 VLIFRVGLSKAFTSDSEVIEAVSDLTPLLAISVFLNGIQPILSGVAIGSGWQAIVAYVNL 431

Query: 581 CNYYIVGLTVGYCLAFMTSLGVAGIWWGVILG-FXXXXXXXXXXXXTNWNKMVNNAFDLL 405
             YYI+GL +G  L F TSLGVAGIWWG+I+G              TNWNK V  A D L
Sbjct: 432 ATYYIIGLPIGCVLGFKTSLGVAGIWWGMIIGVLLQTATLVVLTATTNWNKEVEKAADRL 491

Query: 404 KTYDEEQ 384
           K    E+
Sbjct: 492 KKSANEE 498


>emb|CBI22061.3| unnamed protein product [Vitis vinifera]
          Length = 431

 Score =  189 bits (481), Expect = 6e-46
 Identities = 99/189 (52%), Positives = 125/189 (66%), Gaps = 1/189 (0%)
 Frame = -2

Query: 941 SFAICINYFNLDLTFMLGLSTAAIIRVGTEIGSAHPRVAKFSAIVVNATSILISIIFSAI 762
           S +IC+NY N D+TFMLGLS  A +R+  E+G+AHP VAKFS +VVNA SI+ISI FSAI
Sbjct: 236 SISICMNYLNWDITFMLGLSAGASVRISNELGAAHPLVAKFSVLVVNANSIIISIFFSAI 295

Query: 761 VLAFGPALGRAFINNEEVLKAVSDFTPLLAISIFLNGVEPILSGVGIGIGRPGLVILFYG 582
           VL F   L + F ++ EV+ AVS+ TPLLAIS+FLNG++PILSGV IG G   +V     
Sbjct: 296 VLIFKIGLSKLFTSDTEVINAVSNLTPLLAISVFLNGIQPILSGVAIGSGWQAIVAYVNL 355

Query: 581 CNYYIVGLTVGYCLAFMTSLGVAGIWWGVILG-FXXXXXXXXXXXXTNWNKMVNNAFDLL 405
             YY++GL +G  L F TSLGV GIWWG+I+G              TNW+  V  A D +
Sbjct: 356 ATYYLIGLPIGCVLGFKTSLGVVGIWWGMIIGVLLQTVTLIVLTARTNWDAEVVKAVDRI 415

Query: 404 KTYDEEQTL 378
           K    E+TL
Sbjct: 416 KKSSNEETL 424


>ref|XP_002282907.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Vitis vinifera]
          Length = 506

 Score =  189 bits (481), Expect = 6e-46
 Identities = 99/189 (52%), Positives = 125/189 (66%), Gaps = 1/189 (0%)
 Frame = -2

Query: 941 SFAICINYFNLDLTFMLGLSTAAIIRVGTEIGSAHPRVAKFSAIVVNATSILISIIFSAI 762
           S +IC+NY N D+TFMLGLS  A +R+  E+G+AHP VAKFS +VVNA SI+ISI FSAI
Sbjct: 311 SISICMNYLNWDITFMLGLSAGASVRISNELGAAHPLVAKFSVLVVNANSIIISIFFSAI 370

Query: 761 VLAFGPALGRAFINNEEVLKAVSDFTPLLAISIFLNGVEPILSGVGIGIGRPGLVILFYG 582
           VL F   L + F ++ EV+ AVS+ TPLLAIS+FLNG++PILSGV IG G   +V     
Sbjct: 371 VLIFKIGLSKLFTSDTEVINAVSNLTPLLAISVFLNGIQPILSGVAIGSGWQAIVAYVNL 430

Query: 581 CNYYIVGLTVGYCLAFMTSLGVAGIWWGVILG-FXXXXXXXXXXXXTNWNKMVNNAFDLL 405
             YY++GL +G  L F TSLGV GIWWG+I+G              TNW+  V  A D +
Sbjct: 431 ATYYLIGLPIGCVLGFKTSLGVVGIWWGMIIGVLLQTVTLIVLTARTNWDAEVVKAVDRI 490

Query: 404 KTYDEEQTL 378
           K    E+TL
Sbjct: 491 KKSSNEETL 499


>ref|XP_003545155.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max]
          Length = 505

 Score =  189 bits (479), Expect = 1e-45
 Identities = 100/189 (52%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
 Frame = -2

Query: 941 SFAICINYFNLDLTFMLGLSTAAIIRVGTEIGSAHPRVAKFSAIVVNATSILISIIFSAI 762
           S +IC+NY N D+ FMLGLSTAA +RV  E+G++HPRVAKFS  VVN TSILIS++F  I
Sbjct: 310 SISICMNYLNWDMQFMLGLSTAASVRVSNELGASHPRVAKFSVFVVNGTSILISVVFCTI 369

Query: 761 VLAFGPALGRAFINNEEVLKAVSDFTPLLAISIFLNGVEPILSGVGIGIGRPGLVILFYG 582
           +L F  +L + F ++ +V+ AVS+ TPLLAIS+F NG++PILSGV IG G   LV     
Sbjct: 370 ILIFRVSLSKLFTSDSDVIDAVSNLTPLLAISVFFNGIQPILSGVAIGSGWQALVAYVNL 429

Query: 581 CNYYIVGLTVGYCLAFMTSLGVAGIWWGVILG-FXXXXXXXXXXXXTNWNKMVNNAFDLL 405
            +YY+VGLTVG  L F TSLGVAGIWWG+ILG              TNW   V  A   +
Sbjct: 430 ASYYVVGLTVGCVLGFKTSLGVAGIWWGMILGVLIQTVTLIILTARTNWQAEVEKAVVRI 489

Query: 404 KTYDEEQTL 378
               E  TL
Sbjct: 490 NKSAENDTL 498


>ref|XP_002307571.1| predicted protein [Populus trichocarpa] gi|222857020|gb|EEE94567.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  187 bits (475), Expect = 3e-45
 Identities = 99/181 (54%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
 Frame = -2

Query: 941 SFAICINYFNLDLTFMLGLSTAAIIRVGTEIGSAHPRVAKFSAIVVNATSILISIIFSAI 762
           S +IC+NY N D+ FMLGLS +  +RVG E+G+ HP+VAK S +VVN TSI+ISIIFSAI
Sbjct: 311 SISICMNYLNWDMQFMLGLSASTSVRVGNELGAGHPKVAKLSVMVVNGTSIVISIIFSAI 370

Query: 761 VLAFGPALGRAFINNEEVLKAVSDFTPLLAISIFLNGVEPILSGVGIGIGRPGLVILFYG 582
           VL F   L + F  + EV+ AVSD TPLLAIS+FLNG++PILSGV IG G    V     
Sbjct: 371 VLIFRVGLSKLFTTDYEVIDAVSDLTPLLAISVFLNGIQPILSGVAIGSGWQATVAYVNL 430

Query: 581 CNYYIVGLTVGYCLAFMTSLGVAGIWWGVILG-FXXXXXXXXXXXXTNWNKMVNNAFDLL 405
             YY++GL +G  LAF TSLGVAGIWWG+I G              TNW+  V NA + L
Sbjct: 431 ATYYVIGLPIGCVLAFKTSLGVAGIWWGMIAGVLLQTITLIILTARTNWDTEVQNAAERL 490

Query: 404 K 402
           K
Sbjct: 491 K 491


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