BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012273
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25044.3| unnamed protein product [Vitis vinifera]              103   5e-20
ref|XP_002274683.2| PREDICTED: zinc finger protein NUTCRACKER-li...   101   1e-19
ref|XP_002306797.1| predicted protein [Populus trichocarpa] gi|2...    87   3e-15
ref|XP_002520944.1| nucleic acid binding protein, putative [Rici...    85   2e-14
ref|XP_002302090.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13

>emb|CBI25044.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  103 bits (256), Expect = 5e-20
 Identities = 67/143 (46%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
 Frame = -1

Query: 695 SNTGTVTNLSATALLQKAANVGVAPISSPTQAQSVGHMTSFVSQFQMADSGSGNHMVGAA 516
           S   T  +LSATALLQKAA VG     S T     G   S +S+  MA+ GS  H+   A
Sbjct: 252 STQPTSAHLSATALLQKAATVGATANISFT-----GSSQSHMSRLHMAELGSFPHV--GA 304

Query: 515 SISPGCLAPHSGHFATWKKRDRLTRDFLGLTGECGGDANVG----DLLSFTRTADFPSYD 348
            ISP  L   SG+ +TW+K DRLTRDFLGLTGE GG  NV     D+L +T   +F  YD
Sbjct: 305 GISPEYLGFASGNLSTWQKSDRLTRDFLGLTGESGGSVNVSVNMRDMLQYTGGVEFQPYD 364

Query: 347 RDRSFLRPPDFGFADSATDTWGD 279
           RD S L+   F       +TWGD
Sbjct: 365 RDHSLLKAHGF-------ETWGD 380


>ref|XP_002274683.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera]
          Length = 456

 Score =  101 bits (252), Expect = 1e-19
 Identities = 67/152 (44%), Positives = 81/152 (53%), Gaps = 12/152 (7%)
 Frame = -1

Query: 695 SNTGTVTNLSATALLQKAANVGVAPISSPTQAQSVGHMTSFVSQFQMADSGSGNHMVGAA 516
           S   T  +LSATALLQKAA VG     S T     G   S +S+  MA+ GS  H+   A
Sbjct: 319 STQPTSAHLSATALLQKAATVGATANISFT-----GSSQSHMSRLHMAELGSFPHV--GA 371

Query: 515 SISPGCLAPHSGHFATWKKRDRLTRDFLGLTGECGG------------DANVGDLLSFTR 372
            ISP  L   SG+ +TW+K DRLTRDFLGLTGE GG              N+ D+L +T 
Sbjct: 372 GISPEYLGFASGNLSTWQKSDRLTRDFLGLTGESGGGSGGGADGAVNVSVNMRDMLQYTG 431

Query: 371 TADFPSYDRDRSFLRPPDFGFADSATDTWGDC 276
             +F  YDRD S L+   F       +TWGDC
Sbjct: 432 GVEFQPYDRDHSLLKAHGF-------ETWGDC 456


>ref|XP_002306797.1| predicted protein [Populus trichocarpa] gi|222856246|gb|EEE93793.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 68/172 (39%), Positives = 90/172 (52%), Gaps = 25/172 (14%)
 Frame = -1

Query: 716 HPYTTIASNTGTVTNLSATALLQKAANVGVAPISSPTQAQSVGHMTSFVSQFQMADSGSG 537
           H  +   +++    +LSATALLQKAA+VG A  S       VGH  S ++Q  M + GS 
Sbjct: 308 HSLSNAVTSSAASHHLSATALLQKAASVGAAQTS-------VGH--SQMTQLDMGELGSA 358

Query: 536 N--HMVGAASISPGCLAPHSGHFATWKKRDRLTRDFLGLTGEC---------------GG 408
              H+  A+ ++ G    +    ATW+K DRLTRDFLGLTGEC               GG
Sbjct: 359 GQVHVNSASHVAQGPNY-NLNSLATWQKSDRLTRDFLGLTGECEDHHGHAASNSNGSSGG 417

Query: 407 ---DANVGDLLSFTRTADFPSY---DRDRSFLRP-PDFGFAD-SATDTWGDC 276
                NV ++L++T    F      +RD S L+P   FGFA  SA+ TWGDC
Sbjct: 418 VNASMNVREILTYTGGVGFHQQQYNERDHSLLKPHGGFGFAQPSASKTWGDC 469


>ref|XP_002520944.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223539781|gb|EEF41361.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 466

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 59/157 (37%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
 Frame = -1

Query: 698 ASNTGTVTNLSATALLQKAANVGVAPISSPTQAQSVGHMTSFVSQFQMADSGSGNHMVGA 519
           A+ + +  +LSATALLQKAA VG    ++     +   +   V+  Q ADS        A
Sbjct: 319 AATSASSHHLSATALLQKAATVGATQTAAGHSQMTRLDIGELVAVSQAADSARQQQQQAA 378

Query: 518 ASISPGCLAPHSGHFATWKKRDRLTRDFLGLTGE---------CGG---DANVGDLLSFT 375
                       G+ ATW+K DRLTRDFLGLTG+          GG     NV ++L++T
Sbjct: 379 YM---------GGNLATWQKNDRLTRDFLGLTGDHSSGNVANGSGGVSVSMNVREMLTYT 429

Query: 374 RTADFPSY--DRDRSFLRPPDFGFAD--SATDTWGDC 276
                  Y  DRD S L+P  FGF    +A++TWGDC
Sbjct: 430 WGVGMQHYNSDRDHSLLKPHGFGFGQPPAASETWGDC 466


>ref|XP_002302090.1| predicted protein [Populus trichocarpa] gi|222843816|gb|EEE81363.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 69/176 (39%), Positives = 91/176 (51%), Gaps = 23/176 (13%)
 Frame = -1

Query: 734 PTFLQPHPYTTIASNTGTVTNLSATALLQKAANVGVAPISSPTQAQSVGHMTSFVSQFQM 555
           PTF      +  A++     +LSATALLQKAA+VG       TQ  SVGH  S ++Q  M
Sbjct: 10  PTF---QSLSNAATSQAASHHLSATALLQKAASVGA------TQT-SVGH--SHMTQLDM 57

Query: 554 ADSGSGN--HMVGAASISPGCLAPHSGHFATWKKRDRLTRDFLGLTG-ECGG-------- 408
            + GS    H+   + +S G  + +    ATW+K DRLTRDFLGLT  ECG         
Sbjct: 58  GELGSAGQVHVDSVSHVSQGP-SYNLNSLATWQKSDRLTRDFLGLTAPECGDHHGHAASN 116

Query: 407 -------DANVGDLLSFTRTADFPSY---DRDRSFLRP-PDFGFAD-SATDTWGDC 276
                    NV ++L++T    F      +RD S L+P   FGFA  SA++ WGDC
Sbjct: 117 ANGSVNVSMNVREILTYTGGVGFHQQQYNERDHSLLKPHGGFGFAQPSASEAWGDC 172