BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012256
         (1588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328221.1| predicted protein [Populus trichocarpa] gi|2...   669   0.0  
ref|XP_002312852.1| predicted protein [Populus trichocarpa] gi|2...   667   0.0  
ref|XP_002273133.1| PREDICTED: geranylgeranyl diphosphate reduct...   665   0.0  
ref|XP_002521639.1| geranylgeranyl hydrogenase, putative [Ricinu...   654   0.0  
ref|XP_003519480.1| PREDICTED: geranylgeranyl diphosphate reduct...   618   e-174

>ref|XP_002328221.1| predicted protein [Populus trichocarpa]
            gi|224147708|ref|XP_002336528.1| predicted protein
            [Populus trichocarpa] gi|222835866|gb|EEE74287.1|
            predicted protein [Populus trichocarpa]
            gi|222837736|gb|EEE76101.1| predicted protein [Populus
            trichocarpa]
          Length = 451

 Score =  669 bits (1725), Expect = 0.0
 Identities = 330/450 (73%), Positives = 383/450 (85%), Gaps = 6/450 (1%)
 Frame = -2

Query: 1446 TQTHLLL----PRTLLIKSPKKFPPSKQRFTITSNQLIHGRKFRAAVIGGGPAGSCAADA 1279
            T TH LL    P    +K  +K  P     T TS   I GRK RAAVIGGGPAGS AA+A
Sbjct: 5    TLTHNLLFAPTPPLKTLKPHQKPKPHNLTITATS---ISGRKLRAAVIGGGPAGSSAAEA 61

Query: 1278 LACGGIETFLIERSPAGAKPCGGAIPLCMLNEFSIPLDLIDRKVTQMKIISPSNLTVDFG 1099
            LA GG+ETFL ERSP+ AKPCGGAIPLCM++EFSIPL L+DR VT+MKIISPSNLTVDFG
Sbjct: 62   LAAGGVETFLFERSPSTAKPCGGAIPLCMIDEFSIPLHLVDRHVTRMKIISPSNLTVDFG 121

Query: 1098 -KTLKSHEYIAMLRREVLDSYLRSRAQSNGANLVTALFTHLEVPGSIYD-PYIVHYNVNG 925
             +TLKSHE+I MLRREVLDS+LRSRAQSNGA+ +T L T +EVP      PY++H+ +N 
Sbjct: 122  SRTLKSHEFIPMLRREVLDSFLRSRAQSNGAHFITGLVTDIEVPDFFSSKPYVIHHTINN 181

Query: 924  SKHSIEADVVIGADGANSRVAKSIDAGDYKCAIAFQERIKLPEEKMDYYRNLAEMYVGND 745
             K S+  D+++GADGANSRVAK IDAG+Y CAIAFQERIKLP+EKM+YY +LAEMYVGND
Sbjct: 182  RKQSLAVDLIVGADGANSRVAKIIDAGNYSCAIAFQERIKLPDEKMEYYHDLAEMYVGND 241

Query: 744  ISPDFYGWVFPKCDHVAVGTGTVSSKQDIKLYQRGVRDRVRKKIDGGKVIKVEAHPIPEH 565
            +SPDFY WVFPKCDHVAVGTGTV ++Q+IK+YQRG+R+RVR+KI GGKVIKVEAHPIPEH
Sbjct: 242  VSPDFYAWVFPKCDHVAVGTGTVCARQNIKVYQRGIRERVREKIKGGKVIKVEAHPIPEH 301

Query: 564  PRPRRVRGRVALVGDSAGYVTKCSGEGIYFAAKSGRMCGEAIVNASMNGKRMINEEDLKR 385
            PRPRRVRGRVALVGD+AGYVTKCSGEGIYFAAKSGRMCGEAIV AS  G++MI+EEDLKR
Sbjct: 302  PRPRRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGEKMISEEDLKR 361

Query: 384  EYLKKWDEKYITTFRFLDLLQKVFYGSNAGREALVELCGDEYVQKMTFDSYLYKKIASGD 205
            EYL++WD KY+ TFRFLDLLQKVFYGS+ GREALVELCGDEYVQ+MTFDSYLYKK+A+GD
Sbjct: 362  EYLREWDRKYVNTFRFLDLLQKVFYGSDVGREALVELCGDEYVQRMTFDSYLYKKLATGD 421

Query: 204  RWEDVKMVFSTFGSLIRANIIGQEVEKLVL 115
            RW DVK+V +TFGSL+R  ++G+E+E L L
Sbjct: 422  RWGDVKLVLNTFGSLMRCKVLGREMEALKL 451


>ref|XP_002312852.1| predicted protein [Populus trichocarpa] gi|222849260|gb|EEE86807.1|
            predicted protein [Populus trichocarpa]
          Length = 454

 Score =  667 bits (1721), Expect = 0.0
 Identities = 320/434 (73%), Positives = 377/434 (86%), Gaps = 2/434 (0%)
 Frame = -2

Query: 1410 IKSPKKFPPSKQRFTITSNQLIHGRKFRAAVIGGGPAGSCAADALACGGIETFLIERSPA 1231
            IK  ++  P     T TS+  + GRK RAAVIGGGPAGS AA+ALA GG+ETFL ERSP+
Sbjct: 21   IKQHQQPKPKTLTITATSSSPLSGRKLRAAVIGGGPAGSSAAEALAAGGVETFLFERSPS 80

Query: 1230 GAKPCGGAIPLCMLNEFSIPLDLIDRKVTQMKIISPSNLTVDFG-KTLKSHEYIAMLRRE 1054
             AKPCGGAIPLCM++EFSIPL LIDR VT+MKIISPSNLTVDFG KTLKSHE+I MLRRE
Sbjct: 81   TAKPCGGAIPLCMIDEFSIPLHLIDRHVTRMKIISPSNLTVDFGSKTLKSHEFIPMLRRE 140

Query: 1053 VLDSYLRSRAQSNGANLVTALFTHLEVPGSIYD-PYIVHYNVNGSKHSIEADVVIGADGA 877
            VLDS+LRSRAQSNGA  +T L T +EVP  +   PY++H+ +N  K S+  D+++GADGA
Sbjct: 141  VLDSFLRSRAQSNGAQFITGLVTDIEVPDFLSSKPYVIHHTINNCKRSLAVDLIVGADGA 200

Query: 876  NSRVAKSIDAGDYKCAIAFQERIKLPEEKMDYYRNLAEMYVGNDISPDFYGWVFPKCDHV 697
            NSRVAK I+AG+Y+CAIAFQERIKLP+EKM+YY NLAEMYVGND+SPDFY WVFPKCDHV
Sbjct: 201  NSRVAKIINAGNYRCAIAFQERIKLPDEKMEYYHNLAEMYVGNDVSPDFYAWVFPKCDHV 260

Query: 696  AVGTGTVSSKQDIKLYQRGVRDRVRKKIDGGKVIKVEAHPIPEHPRPRRVRGRVALVGDS 517
            AVGTGT  +++DIK+YQRG+R+RV++KI GG+VIKVEAHPIPE PRPRRVRGRVALVGD+
Sbjct: 261  AVGTGTACARRDIKVYQRGIRERVKEKIKGGRVIKVEAHPIPEQPRPRRVRGRVALVGDA 320

Query: 516  AGYVTKCSGEGIYFAAKSGRMCGEAIVNASMNGKRMINEEDLKREYLKKWDEKYITTFRF 337
            AGYVTKCSGEGIYFAAKSGRMCGEAIV AS  G+RM++EEDL+REYL++WD KY+ TFRF
Sbjct: 321  AGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGERMVSEEDLRREYLREWDNKYVNTFRF 380

Query: 336  LDLLQKVFYGSNAGREALVELCGDEYVQKMTFDSYLYKKIASGDRWEDVKMVFSTFGSLI 157
            LDLLQ+VFYGSN GREALVELCGDEYVQ+MTFDSYLYKK+ASGDRW+DVK+V +TFGS +
Sbjct: 381  LDLLQRVFYGSNVGREALVELCGDEYVQRMTFDSYLYKKMASGDRWDDVKLVLNTFGSFM 440

Query: 156  RANIIGQEVEKLVL 115
            R  ++G+E+E L L
Sbjct: 441  RCKVVGREMEALKL 454


>ref|XP_002273133.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Vitis
            vinifera]
          Length = 466

 Score =  665 bits (1716), Expect = 0.0
 Identities = 321/422 (76%), Positives = 366/422 (86%)
 Frame = -2

Query: 1386 PSKQRFTITSNQLIHGRKFRAAVIGGGPAGSCAADALACGGIETFLIERSPAGAKPCGGA 1207
            PS    +  SN  + GRK RAAVIGGGPAGS AA+ LA GGIETFL ERSPA +KPCGGA
Sbjct: 43   PSSLIISSISNPPLSGRKLRAAVIGGGPAGSSAAETLAAGGIETFLFERSPASSKPCGGA 102

Query: 1206 IPLCMLNEFSIPLDLIDRKVTQMKIISPSNLTVDFGKTLKSHEYIAMLRREVLDSYLRSR 1027
            IPLCML EFSIP +L+DR+VT+MKIISPSNLTVDFGKTLK +EYIAMLRREVLDS+LR R
Sbjct: 103  IPLCMLEEFSIPPELVDRRVTRMKIISPSNLTVDFGKTLKPNEYIAMLRREVLDSFLRRR 162

Query: 1026 AQSNGANLVTALFTHLEVPGSIYDPYIVHYNVNGSKHSIEADVVIGADGANSRVAKSIDA 847
            A+S GA  +TAL T L++P S   PY++HYN  GS+HS+  DVVIGADGANSRVAKSI A
Sbjct: 163  AESAGATAITALVTSLDLPSSPASPYVIHYNAGGSRHSLAVDVVIGADGANSRVAKSIKA 222

Query: 846  GDYKCAIAFQERIKLPEEKMDYYRNLAEMYVGNDISPDFYGWVFPKCDHVAVGTGTVSSK 667
            GDY CAIAFQERIKLPEEKM+YY++LAEMYVGND+SPDFY WVFPKCDHVAVGTGTV SK
Sbjct: 223  GDYSCAIAFQERIKLPEEKMEYYQDLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCSK 282

Query: 666  QDIKLYQRGVRDRVRKKIDGGKVIKVEAHPIPEHPRPRRVRGRVALVGDSAGYVTKCSGE 487
            Q+IKLYQRG+R+RV  KI GGKVIKVEAHPIPEHPRP R+RGRVALVGD+AGYVTKCSGE
Sbjct: 283  QNIKLYQRGIRERVEPKISGGKVIKVEAHPIPEHPRPVRIRGRVALVGDAAGYVTKCSGE 342

Query: 486  GIYFAAKSGRMCGEAIVNASMNGKRMINEEDLKREYLKKWDEKYITTFRFLDLLQKVFYG 307
            GIYFAAKSG+MC EAI+ AS  G RMI+EEDL+REYLK+WD KY+ T+R LDLL +VFYG
Sbjct: 343  GIYFAAKSGKMCAEAILKASEGGLRMISEEDLRREYLKEWDGKYLVTYRLLDLLHRVFYG 402

Query: 306  SNAGREALVELCGDEYVQKMTFDSYLYKKIASGDRWEDVKMVFSTFGSLIRANIIGQEVE 127
            SNA REALVELCG+EYVQ+MTF+SYLYK++A GD WED KMVF+TFGSLIR  I+G++V+
Sbjct: 403  SNAAREALVELCGNEYVQRMTFESYLYKRLAEGDGWEDAKMVFNTFGSLIRCKIVGRDVQ 462

Query: 126  KL 121
             L
Sbjct: 463  AL 464


>ref|XP_002521639.1| geranylgeranyl hydrogenase, putative [Ricinus communis]
            gi|223539151|gb|EEF40746.1| geranylgeranyl hydrogenase,
            putative [Ricinus communis]
          Length = 451

 Score =  654 bits (1688), Expect = 0.0
 Identities = 325/447 (72%), Positives = 376/447 (84%), Gaps = 6/447 (1%)
 Frame = -2

Query: 1443 QTHLLLPRTLLIKSPKKFPPSKQRF----TITSNQLIHGRKFRAAVIGGGPAGSCAADAL 1276
            Q H  L  T L   P   P SK  F    T++    I GRK RAAVIGGGPAGS AA+AL
Sbjct: 5    QIHHHLYSTFLC--PLYTPTSKSTFFKPQTLSITSAISGRKLRAAVIGGGPAGSSAAEAL 62

Query: 1275 ACGGIETFLIERSPAGAKPCGGAIPLCMLNEFSIPLDLIDRKVTQMKIISPSNLTVDFG- 1099
            A GGIETFL ERS + AKPCGGAIPLCML+EF+IPL+LIDR VT+MKI+SPSNLTVDFG 
Sbjct: 63   AAGGIETFLFERSTSTAKPCGGAIPLCMLDEFNIPLNLIDRHVTRMKIVSPSNLTVDFGS 122

Query: 1098 KTLKSHEYIAMLRREVLDSYLRSRAQSNGANLVTALFTHLEVPGSIYDPYIVHYNVNGS- 922
            KTLK HE I MLRREVLDS+LRSR QS GA L+  L  H+++P    +PYI+H+ +N + 
Sbjct: 123  KTLKPHESIPMLRREVLDSFLRSRVQSKGATLIQGLVMHIDIPSLPKEPYIIHHIINNNI 182

Query: 921  KHSIEADVVIGADGANSRVAKSIDAGDYKCAIAFQERIKLPEEKMDYYRNLAEMYVGNDI 742
            K  +  DVVIGADGANSRVAKSI+AG+Y CAIAFQERI+LP++KM+YY++LAEMYVG+D+
Sbjct: 183  KGELAVDVVIGADGANSRVAKSINAGNYSCAIAFQERIRLPDDKMEYYKDLAEMYVGDDV 242

Query: 741  SPDFYGWVFPKCDHVAVGTGTVSSKQDIKLYQRGVRDRVRKKIDGGKVIKVEAHPIPEHP 562
            SPDFY WVFPKCDHVAVGTGTV SKQ+IK++QRG+R+RVR KI GGKVIKVEAHPIPEHP
Sbjct: 243  SPDFYAWVFPKCDHVAVGTGTVCSKQNIKVFQRGIRERVRDKIKGGKVIKVEAHPIPEHP 302

Query: 561  RPRRVRGRVALVGDSAGYVTKCSGEGIYFAAKSGRMCGEAIVNASMNGKRMINEEDLKRE 382
            RP RVRGRVALVGD+AGYVTKCSGEGIYFAAKSGRMCGE IV AS  G++M++EEDLKRE
Sbjct: 303  RPTRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVKASEGGEKMVSEEDLKRE 362

Query: 381  YLKKWDEKYITTFRFLDLLQKVFYGSNAGREALVELCGDEYVQKMTFDSYLYKKIASGDR 202
            YL++WD KY+ TFRFLDLLQ+VFYGSN GREALVELCGDEYVQ+MTFDSYLYKK+A GDR
Sbjct: 363  YLREWDNKYVNTFRFLDLLQRVFYGSNVGREALVELCGDEYVQRMTFDSYLYKKLAGGDR 422

Query: 201  WEDVKMVFSTFGSLIRANIIGQEVEKL 121
            WEDVKMV +TFGSL+R  I+G+E+E L
Sbjct: 423  WEDVKMVLNTFGSLVRCRIVGREMEGL 449


>ref|XP_003519480.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
            [Glycine max]
          Length = 448

 Score =  618 bits (1593), Expect = e-174
 Identities = 311/445 (69%), Positives = 358/445 (80%), Gaps = 2/445 (0%)
 Frame = -2

Query: 1443 QTHLLLPRTLLIKSPKKFPPSKQRFTITSNQLIHGRKFRAAVIGGGPAGSCAADALACGG 1264
            QT   LP   +  S  K  P  + FTI +++ I GRK RAAVIGGGPAGS AA+ALA GG
Sbjct: 6    QTSFCLPTFSIPTSKPK--PYLKSFTIKASKSISGRKLRAAVIGGGPAGSSAAEALASGG 63

Query: 1263 IETFLIERSPAG-AKPCGGAIPLCMLNEFSIPLDLIDRKVTQMKIISPSNLTVDFGKTLK 1087
            +ETFL ER+P   AKPCGGAIPLCML EF IP  LIDR VT M+I SPSN+ VDFGKTLK
Sbjct: 64   VETFLFERNPPSVAKPCGGAIPLCMLEEFDIPNHLIDRHVTHMRIFSPSNIAVDFGKTLK 123

Query: 1086 SHEYIAMLRREVLDSYLRSRAQSNGANLVTALFTHLEVPGSIYDPYIVHYNVNGS-KHSI 910
             HE+IAMLRREVLDS+LRSRA + GA  ++ L T L++P S   PY VHY  NGS + S+
Sbjct: 124  PHEFIAMLRREVLDSFLRSRAHAAGATAISGLVTALDLPASPDAPYTVHYTANGSSRRSL 183

Query: 909  EADVVIGADGANSRVAKSIDAGDYKCAIAFQERIKLPEEKMDYYRNLAEMYVGNDISPDF 730
              DVVIGADGANSRVAK+I AGDY CAIAFQERIKLP+EKM YY NLAEMYVG+D+SPDF
Sbjct: 184  AVDVVIGADGANSRVAKAIGAGDYACAIAFQERIKLPDEKMAYYENLAEMYVGDDVSPDF 243

Query: 729  YGWVFPKCDHVAVGTGTVSSKQDIKLYQRGVRDRVRKKIDGGKVIKVEAHPIPEHPRPRR 550
            Y WVFPKCDHVAVGTGTV SK+DIKLYQRG+R+RV+ KI+GGKVIKVEAHPIPEHPRP R
Sbjct: 244  YAWVFPKCDHVAVGTGTVRSKKDIKLYQRGIRERVKPKINGGKVIKVEAHPIPEHPRPVR 303

Query: 549  VRGRVALVGDSAGYVTKCSGEGIYFAAKSGRMCGEAIVNASMNGKRMINEEDLKREYLKK 370
            VRGRVALVGD+AGYVTKCSGEGIYFAAKSGR+CG  +V AS  G RMI+E DL+REYLK 
Sbjct: 304  VRGRVALVGDAAGYVTKCSGEGIYFAAKSGRVCGNGVVRASEGGDRMIDECDLRREYLKP 363

Query: 369  WDEKYITTFRFLDLLQKVFYGSNAGREALVELCGDEYVQKMTFDSYLYKKIASGDRWEDV 190
            WD +Y  TFRFLDLLQ+VFYGSNA REALVELCGDEYVQ+MTF+SYLYKK+A G   +  
Sbjct: 364  WDAEYANTFRFLDLLQRVFYGSNACREALVELCGDEYVQRMTFESYLYKKLARGRVLDHA 423

Query: 189  KMVFSTFGSLIRANIIGQEVEKLVL 115
            K+  +T GSL+R+ ++   +E  +L
Sbjct: 424  KLFMNTLGSLVRSKVVQTSMESFIL 448