BLASTX nr result

ID: Coptis23_contig00012255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012255
         (1097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524773.1| serine-threonine protein kinase, plant-type,...   399   e-109
ref|XP_002889459.1| leucine-rich repeat family protein [Arabidop...   397   e-108
ref|XP_002874882.1| leucine-rich repeat family protein [Arabidop...   396   e-108
gb|AAF86511.1|AC002560_4 F21B7.6 [Arabidopsis thaliana] gi|12083...   394   e-107
dbj|BAF00391.1| protein kinase (F21B7.6) like protein [Arabidops...   394   e-107

>ref|XP_002524773.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223535957|gb|EEF37616.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 400

 Score =  399 bits (1025), Expect = e-109
 Identities = 197/317 (62%), Positives = 246/317 (77%)
 Frame = -1

Query: 1091 AGSPGLEGRLHPSLGKLSSLTELTLVPGRVMGALPLTISNLHHLKFLAISNNFISGPIPK 912
            AGS GL GRL P++GKLS+L EL++VPGR++G+LP ++S L  L+FLA+S NF+SG IP 
Sbjct: 85   AGSSGLTGRLDPAIGKLSALAELSIVPGRIIGSLPQSLSQLKGLRFLAVSRNFLSGEIPA 144

Query: 911  SFSNIKMIQTLDLSYNQLTGSIPGPFNKLSSLNNLILCHNHLTGSIPSFFSSKTLLRIDL 732
            S   ++ ++TLDLSYNQLTG IP     +  L+N+ILCHN L+GS+P+F S +TL R+DL
Sbjct: 145  SLGQLRNLKTLDLSYNQLTGPIPHSIGTIPQLSNVILCHNRLSGSVPAFLS-QTLTRLDL 203

Query: 731  KHNNXXXXXXXXXXXXXXXXXXXXXSNQFLGPVNRVLMQLNRLNYLDLSQNRFTGPIPDS 552
            KHN+                      N+  GPV+R+L +LN+LNYLDLS N+FTG IP  
Sbjct: 204  KHNDLSGSLSPYALPPSVQYLSLAW-NRLSGPVDRLLNRLNQLNYLDLSMNQFTGGIPGR 262

Query: 551  VFSYPLVNLQLQRNFFSGPVRPLNRVGIKTVDLSYNRLTGQISSMLSSVQNLYLNNNRFI 372
            VF+YP+ NLQLQRN F GPV+P ++V I TVDLSYNRL+GQIS + SSVQNLYLNNNRF 
Sbjct: 263  VFTYPISNLQLQRNLFCGPVQPSDQVIIGTVDLSYNRLSGQISPLFSSVQNLYLNNNRFT 322

Query: 371  GQVPGSFVERLLDEGIEVLYLQNNYLTGIEINPTAEIPMSSTLCLQYNCMVPPMQTPCPL 192
            GQVPGSFV+RLL   I++LYLQ+NYLTGIEINPTAEIP+SS+LCLQYNCMVPP+QTPCPL
Sbjct: 323  GQVPGSFVDRLLAASIQILYLQHNYLTGIEINPTAEIPLSSSLCLQYNCMVPPVQTPCPL 382

Query: 191  RAGKQRTRPAEQCIKWK 141
            +AGKQ+TRP  QC +WK
Sbjct: 383  KAGKQKTRPTAQCSEWK 399


>ref|XP_002889459.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297335301|gb|EFH65718.1| leucine-rich repeat family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 396

 Score =  397 bits (1021), Expect = e-108
 Identities = 198/317 (62%), Positives = 242/317 (76%)
 Frame = -1

Query: 1091 AGSPGLEGRLHPSLGKLSSLTELTLVPGRVMGALPLTISNLHHLKFLAISNNFISGPIPK 912
            AGSPGL GR+ P++GKLS+LTEL++VPGR+MGALP TIS L  L+FLAIS NFISG IP 
Sbjct: 81   AGSPGLSGRIDPAIGKLSALTELSIVPGRIMGALPATISQLKDLRFLAISRNFISGEIPA 140

Query: 911  SFSNIKMIQTLDLSYNQLTGSIPGPFNKLSSLNNLILCHNHLTGSIPSFFSSKTLLRIDL 732
            S   ++ ++TLDLSYNQLTG+I      L  L+NLILCHNHLTGSIP F S +TL RIDL
Sbjct: 141  SLGEVRGLRTLDLSYNQLTGTISPSIGSLPELSNLILCHNHLTGSIPPFLS-QTLTRIDL 199

Query: 731  KHNNXXXXXXXXXXXXXXXXXXXXXSNQFLGPVNRVLMQLNRLNYLDLSQNRFTGPIPDS 552
            K N+                      NQ  GPV+ VL++LN+LNYLDLS NRFTG IP  
Sbjct: 200  KRNSLTGSISPASLPPSLQYLSLAW-NQLTGPVDHVLLRLNQLNYLDLSLNRFTGTIPGR 258

Query: 551  VFSYPLVNLQLQRNFFSGPVRPLNRVGIKTVDLSYNRLTGQISSMLSSVQNLYLNNNRFI 372
            +F++P+ NLQLQRNFF G ++P N+V I TVDLSYNR +G IS +LSSV+NLYLN+NRF 
Sbjct: 259  IFAFPITNLQLQRNFFYGLIQPANQVTIPTVDLSYNRFSGGISPLLSSVENLYLNSNRFT 318

Query: 371  GQVPGSFVERLLDEGIEVLYLQNNYLTGIEINPTAEIPMSSTLCLQYNCMVPPMQTPCPL 192
            G+VP SFVERLL   I+ LYLQ+N+LTGI+I+P AEIP+SS+LCLQYNCMVPP+QTPCPL
Sbjct: 319  GEVPASFVERLLSASIQTLYLQHNFLTGIQISPAAEIPVSSSLCLQYNCMVPPLQTPCPL 378

Query: 191  RAGKQRTRPAEQCIKWK 141
            +AG Q+TRP  QC +W+
Sbjct: 379  KAGPQKTRPTTQCNEWR 395


>ref|XP_002874882.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297320719|gb|EFH51141.1| leucine-rich repeat family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 395

 Score =  396 bits (1017), Expect = e-108
 Identities = 194/317 (61%), Positives = 244/317 (76%)
 Frame = -1

Query: 1091 AGSPGLEGRLHPSLGKLSSLTELTLVPGRVMGALPLTISNLHHLKFLAISNNFISGPIPK 912
            AGSPGL GR+ P++GKLS+LTEL++VPGR+MG+LP TIS   +L+FLAIS NF+SG IP 
Sbjct: 80   AGSPGLSGRIDPAIGKLSALTELSIVPGRIMGSLPHTISQSKNLRFLAISRNFLSGEIPA 139

Query: 911  SFSNIKMIQTLDLSYNQLTGSIPGPFNKLSSLNNLILCHNHLTGSIPSFFSSKTLLRIDL 732
            S   ++ ++TLDLSYNQLTGSIP P   L  L+NLILCHNHL GSIP F S ++L RIDL
Sbjct: 140  SLGELRRLKTLDLSYNQLTGSIPPPIGYLPELSNLILCHNHLNGSIPQFLS-QSLTRIDL 198

Query: 731  KHNNXXXXXXXXXXXXXXXXXXXXXSNQFLGPVNRVLMQLNRLNYLDLSQNRFTGPIPDS 552
            K NN                      N   GPVNRVL++LN+LNYLDLS NRFTG IP  
Sbjct: 199  KRNNLTGIISPTSLPPSLQYLSLAW-NHLTGPVNRVLLRLNQLNYLDLSLNRFTGAIPGQ 257

Query: 551  VFSYPLVNLQLQRNFFSGPVRPLNRVGIKTVDLSYNRLTGQISSMLSSVQNLYLNNNRFI 372
            +F++P+ NLQLQRNFF G ++P+N+V I TVDLSYNR +G++S +LS+VQN+YLNNNRF 
Sbjct: 258  IFTFPITNLQLQRNFFYGVIQPVNQVTIPTVDLSYNRFSGELSPLLSNVQNIYLNNNRFT 317

Query: 371  GQVPGSFVERLLDEGIEVLYLQNNYLTGIEINPTAEIPMSSTLCLQYNCMVPPMQTPCPL 192
            GQVP SFV+RLL   I+ LYLQ+N+LTGI+I+P A+IP+SS+LCLQYNCMV P+QTPCP+
Sbjct: 318  GQVPVSFVDRLLASNIQTLYLQHNFLTGIQISPAADIPVSSSLCLQYNCMVLPVQTPCPV 377

Query: 191  RAGKQRTRPAEQCIKWK 141
            +AG Q+TRP  QC +W+
Sbjct: 378  KAGLQKTRPTTQCNEWR 394


>gb|AAF86511.1|AC002560_4 F21B7.6 [Arabidopsis thaliana] gi|12083226|gb|AAG48772.1|AF332409_1
            unknown protein [Arabidopsis thaliana]
          Length = 395

 Score =  394 bits (1013), Expect = e-107
 Identities = 198/317 (62%), Positives = 240/317 (75%)
 Frame = -1

Query: 1091 AGSPGLEGRLHPSLGKLSSLTELTLVPGRVMGALPLTISNLHHLKFLAISNNFISGPIPK 912
            AGSPGL GR+ P++GKLS+LTEL++VPGR+MGALP TIS L  L+FLAIS NFISG IP 
Sbjct: 80   AGSPGLSGRIDPAIGKLSALTELSIVPGRIMGALPATISQLKDLRFLAISRNFISGEIPA 139

Query: 911  SFSNIKMIQTLDLSYNQLTGSIPGPFNKLSSLNNLILCHNHLTGSIPSFFSSKTLLRIDL 732
            S   ++ ++TLDLSYNQLTG+I      L  L+NLILCHNHLTGSIP F S +TL RIDL
Sbjct: 140  SLGEVRGLRTLDLSYNQLTGTISPSIGSLPELSNLILCHNHLTGSIPPFLS-QTLTRIDL 198

Query: 731  KHNNXXXXXXXXXXXXXXXXXXXXXSNQFLGPVNRVLMQLNRLNYLDLSQNRFTGPIPDS 552
            K N+                      NQ  G V  VL++LN+LNYLDLS NRFTG IP  
Sbjct: 199  KRNSLTGSISPASLPPSLQYLSLAW-NQLTGSVYHVLLRLNQLNYLDLSLNRFTGTIPAR 257

Query: 551  VFSYPLVNLQLQRNFFSGPVRPLNRVGIKTVDLSYNRLTGQISSMLSSVQNLYLNNNRFI 372
            VF++P+ NLQLQRNFF G ++P N+V I TVDLSYNR +G IS +LSSV+NLYLN+NRF 
Sbjct: 258  VFAFPITNLQLQRNFFFGLIQPANQVTISTVDLSYNRFSGGISPLLSSVENLYLNSNRFT 317

Query: 371  GQVPGSFVERLLDEGIEVLYLQNNYLTGIEINPTAEIPMSSTLCLQYNCMVPPMQTPCPL 192
            G+VP SFVERLL   I+ LYLQ+N+LTGI+I+P AEIP+SS+LCLQYNCMVPP+QTPCPL
Sbjct: 318  GEVPASFVERLLSANIQTLYLQHNFLTGIQISPAAEIPVSSSLCLQYNCMVPPLQTPCPL 377

Query: 191  RAGKQRTRPAEQCIKWK 141
            +AG Q+TRP  QC +W+
Sbjct: 378  KAGPQKTRPTTQCTEWR 394


>dbj|BAF00391.1| protein kinase (F21B7.6) like protein [Arabidopsis thaliana]
          Length = 397

 Score =  394 bits (1013), Expect = e-107
 Identities = 198/317 (62%), Positives = 240/317 (75%)
 Frame = -1

Query: 1091 AGSPGLEGRLHPSLGKLSSLTELTLVPGRVMGALPLTISNLHHLKFLAISNNFISGPIPK 912
            AGSPGL GR+ P++GKLS+LTEL++VPGR+MGALP TIS L  L+FLAIS NFISG IP 
Sbjct: 82   AGSPGLSGRIDPAIGKLSALTELSIVPGRIMGALPATISQLKDLRFLAISRNFISGEIPA 141

Query: 911  SFSNIKMIQTLDLSYNQLTGSIPGPFNKLSSLNNLILCHNHLTGSIPSFFSSKTLLRIDL 732
            S   ++ ++TLDLSYNQLTG+I      L  L+NLILCHNHLTGSIP F S +TL RIDL
Sbjct: 142  SLGEVRGLRTLDLSYNQLTGTISPSIGSLPELSNLILCHNHLTGSIPPFLS-QTLTRIDL 200

Query: 731  KHNNXXXXXXXXXXXXXXXXXXXXXSNQFLGPVNRVLMQLNRLNYLDLSQNRFTGPIPDS 552
            K N+                      NQ  G V  VL++LN+LNYLDLS NRFTG IP  
Sbjct: 201  KRNSLTGSISPASLPPSLQYLSLAW-NQLTGSVYHVLLRLNQLNYLDLSLNRFTGTIPAR 259

Query: 551  VFSYPLVNLQLQRNFFSGPVRPLNRVGIKTVDLSYNRLTGQISSMLSSVQNLYLNNNRFI 372
            VF++P+ NLQLQRNFF G ++P N+V I TVDLSYNR +G IS +LSSV+NLYLN+NRF 
Sbjct: 260  VFAFPITNLQLQRNFFFGLIQPANQVTISTVDLSYNRFSGGISPLLSSVENLYLNSNRFT 319

Query: 371  GQVPGSFVERLLDEGIEVLYLQNNYLTGIEINPTAEIPMSSTLCLQYNCMVPPMQTPCPL 192
            G+VP SFVERLL   I+ LYLQ+N+LTGI+I+P AEIP+SS+LCLQYNCMVPP+QTPCPL
Sbjct: 320  GEVPASFVERLLSANIQTLYLQHNFLTGIQISPAAEIPVSSSLCLQYNCMVPPLQTPCPL 379

Query: 191  RAGKQRTRPAEQCIKWK 141
            +AG Q+TRP  QC +W+
Sbjct: 380  KAGPQKTRPTTQCTEWR 396


Top