BLASTX nr result

ID: Coptis23_contig00012251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012251
         (1672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20378.3| unnamed protein product [Vitis vinifera]              102   3e-19
ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247...    94   1e-16
ref|XP_002316934.1| cyclic nucleotide-gated channel [Populus tri...    76   2e-11
ref|XP_003526202.1| PREDICTED: uncharacterized protein LOC100797...    65   5e-08
ref|XP_002521829.1| conserved hypothetical protein [Ricinus comm...    60   2e-06

>emb|CBI20378.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  102 bits (254), Expect = 3e-19
 Identities = 103/398 (25%), Positives = 160/398 (40%), Gaps = 11/398 (2%)
 Frame = +3

Query: 150  DDHWAFLEEIEAPMWVDLNLLESTSGEQDINAGWFEQVHSFHLME-------FSTLSQGK 308
            DDHWAFLEE EAPMW DL  LE+ +  QD++  WF   H FH          FS  S+G 
Sbjct: 7    DDHWAFLEEFEAPMWADLT-LEAKTNNQDVDDKWFHISHPFHQFSSHQLKSAFSGSSEGS 65

Query: 309  LNLETDLLGPXXXXXXXXXXXXXXXWEGNNNHAIRSVSGKTSSGQQVKPRIKIKHSSSFR 488
             NL+ DL GP                     H      GK + G  +  +  +K  S   
Sbjct: 66   ENLDFDLHGPSSPKLPSSVS------RSRGKHYRSRNWGKENGGFSLNKQHPVKSLS--- 116

Query: 489  GKVVGKGSSMDASRPVLLQRMPNFQDPKVTPSLKVRLKSENRSNRDGVKPCSGGSANTLS 668
                GK S +D+     ++  P+  + K T S K  L  ++ S R  +           +
Sbjct: 117  ----GKTSWVDSGSSQEIKPKPSCGNLKGTCSSKTSLGCDSSSTRTSIP--------NYT 164

Query: 669  IPAXXXXXXXXXXXXXLDSHKCQSSIVDSRVSCTTTSNVPESISNFGDSQKSSGSRASNG 848
            IP                     SS  DS+   ++ +          +S  ++ +    G
Sbjct: 165  IPI--------------------SSFGDSKGRLSSVA------IKASESNSTTSTVTFEG 198

Query: 849  SERFLPDSLALSDLSHQVFGKPCGLLSAVRISLRRSYVTRQPARVEVKDKRPLKGRK--- 1019
            + +    SL   ++S   FG   GLLS +RI+LR+S  TRQ +RVE+   +  +G K   
Sbjct: 199  THQQPQKSL---EVSSGPFGHTSGLLSVMRITLRKSCATRQASRVEINKCQQSEGCKSSA 255

Query: 1020 -XXXXXXXXXXXXXFYDTMLTAKAKKSRTPESKQATKVEQPTDNNKAIVKNLTNRSEAQL 1196
                            D   T    + RTP+S+   +  Q T  N+      +  S   +
Sbjct: 256  GKSSVGSSSNPGYDVKDRTATEIRNRDRTPDSRNVMRTSQ-TAVNRGRASTTSKASNILV 314

Query: 1197 LVQSSNPISDGKALIGRFGCQERSKLKVSCQSERRRPL 1310
              +++N   +GK ++ +   ++  K KV CQ+  R+ L
Sbjct: 315  DYRTNNSRKEGKRIVAKSTTKDAVKSKVVCQTINRKGL 352


>ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247040 [Vitis vinifera]
          Length = 445

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 102/392 (26%), Positives = 158/392 (40%), Gaps = 5/392 (1%)
 Frame = +3

Query: 150  DDHWAFLEEIEAPMWVDLNLLESTSGEQDINAGWFEQVHSFHLME-FSTLSQGKLNLETD 326
            DDHWAFLEE EAPMW DL  LE+ +  QD+    F Q  S  L   FS  S+G  NL+ D
Sbjct: 7    DDHWAFLEEFEAPMWADLT-LEAKTNNQDV----FHQFSSHQLKSAFSGSSEGSENLDFD 61

Query: 327  LLGPXXXXXXXXXXXXXXXWEGNNNHAIRSVSGKTSSGQQVKPRIKIKHSSSFRGKVVGK 506
            L GP                     H      GK + G  +  +  +K  S       GK
Sbjct: 62   LHGPSSPKLPSSVS------RSRGKHYRSRNWGKENGGFSLNKQHPVKSLS-------GK 108

Query: 507  GSSMDASRPVLLQRMPNFQDPKVTPSLKVRLKSENRSNRDGVKPCSGGSANTLSIPAXXX 686
             S +D+     ++  P+  + K T S K  L  ++ S R  +           +IP    
Sbjct: 109  TSWVDSGSSQEIKPKPSCGNLKGTCSSKTSLGCDSSSTRTSIP--------NYTIPI--- 157

Query: 687  XXXXXXXXXXLDSHKCQSSIVDSRVSCTTTSNVPESISNFGDSQKSSGSRASNGSERFLP 866
                             SS  DS+   ++ +          +S  ++ +    G+ +   
Sbjct: 158  -----------------SSFGDSKGRLSSVA------IKASESNSTTSTVTFEGTHQQPQ 194

Query: 867  DSLALSDLSHQVFGKPCGLLSAVRISLRRSYVTRQPARVEVKDKRPLKGRK----XXXXX 1034
             SL   ++S   FG   GLLS +RI+LR+S  TRQ +RVE+   +  +G K         
Sbjct: 195  KSL---EVSSGPFGHTSGLLSVMRITLRKSCATRQASRVEINKCQQSEGCKSSAGKSSVG 251

Query: 1035 XXXXXXXXFYDTMLTAKAKKSRTPESKQATKVEQPTDNNKAIVKNLTNRSEAQLLVQSSN 1214
                      D   T    + RTP+S+   +  Q T  N+      +  S   +  +++N
Sbjct: 252  SSSNPGYDVKDRTATEIRNRDRTPDSRNVMRTSQ-TAVNRGRASTTSKASNILVDYRTNN 310

Query: 1215 PISDGKALIGRFGCQERSKLKVSCQSERRRPL 1310
               +GK ++ +   ++  K KV CQ+  R+ L
Sbjct: 311  SRKEGKRIVAKSTTKDAVKSKVVCQTINRKGL 342


>ref|XP_002316934.1| cyclic nucleotide-gated channel [Populus trichocarpa]
            gi|222859999|gb|EEE97546.1| cyclic nucleotide-gated
            channel [Populus trichocarpa]
          Length = 565

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 99/414 (23%), Positives = 156/414 (37%), Gaps = 18/414 (4%)
 Frame = +3

Query: 153  DHWAFLEEIEAPMWVDLNLLESTSGEQDINAGWFEQVHSFH-------LMEFSTLSQGKL 311
            DHWAFLEEIEAPMWVD   +E  S  QD++  WF   H FH          F+  S+  +
Sbjct: 9    DHWAFLEEIEAPMWVDFT-IEEKSNYQDVDDKWFHTSHPFHQCTSLRLKAAFAHSSERSM 67

Query: 312  NLETDLLGPXXXXXXXXXXXXXXXWEGNNNHAIRSVSGKTSSGQQVKPRIKIKHSSSFRG 491
            + + +  GP                 G +   ++   G+       K  +K+ +  S R 
Sbjct: 68   SSDFEFKGPSSPNIPSSVSRS----RGKHYAGMKWGGGECDLSMNKKHPVKVLNDKSSR- 122

Query: 492  KVVGKGSSMDASRPVLLQRMPNFQDPKVTPSLKVRLKSENRSNRDG------VKPCSGGS 653
                     D  +P L     +  + K T   K+ + S     R+        K   GGS
Sbjct: 123  ---VNSEPSDEIKPKL-----SLANSKGTSRSKLSMVSGKSFTRNAKETDLKAKSGQGGS 174

Query: 654  ANTLSIPAXXXXXXXXXXXXXLDSHKCQSSIVDSRVSCTTTSNVPESISNFGDSQKSSGS 833
             ++L                    +   + + DS  S  T          FG     S  
Sbjct: 175  ESSL--------------------NSGMAMVSDSNTSTVT----------FG-----SDH 199

Query: 834  RASNGSERFLPDSLALSDLSHQVFGKPCGLLSAVRISLRRSYVTRQPARVEVKDK-RPLK 1010
            +A  G+   L           + F    GLLSAVR  LR+S+VTR+ +RVE+KD+ + L+
Sbjct: 200  QARQGNMEVL----------SRGFDHTSGLLSAVRNGLRKSFVTRKASRVEIKDENKQLR 249

Query: 1011 GRK----XXXXXXXXXXXXXFYDTMLTAKAKKSRTPESKQATKVEQPTDNNKAIVKNLTN 1178
             RK                    + +T    K +TP+S+   ++ +     K    N++ 
Sbjct: 250  DRKSSSSKSSVGSSLKPGHDVKSSTITLMRNKEQTPDSRNVARMTEAARKKKK-DSNMSK 308

Query: 1179 RSEAQLLVQSSNPISDGKALIGRFGCQERSKLKVSCQSERRRPLGLHNVQSLYS 1340
             S+ + + +  N      + + +   QE  K KV  Q+ R   L  H     +S
Sbjct: 309  TSDVR-VKEVFNSRKGAISNVSKSAPQEALKSKVQKQTIRVTALAEHRGNKQHS 361


>ref|XP_003526202.1| PREDICTED: uncharacterized protein LOC100797287 [Glycine max]
          Length = 388

 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 86/314 (27%), Positives = 119/314 (37%), Gaps = 19/314 (6%)
 Frame = +3

Query: 105 KKGDTQRKSYTEPIHDDHWAFLEEIEAPMWVDLNLLESTSGEQDINAG-WFEQVHSFHLM 281
           KK  T +KS+      D WAFLE IEAPMWVDL L E  SG  D     WF   H FH M
Sbjct: 6   KKAITMKKSF------DPWAFLEHIEAPMWVDLTL-EVKSGCVDTGDDEWFNTSHPFHQM 58

Query: 282 EF----STLSQGKLNLETDLLGPXXXXXXXXXXXXXXX---WEGNN-NHAIRSVSGKTSS 437
                 S  S G+  L + +  P                  WEG + N  +    G +  
Sbjct: 59  SARELKSRFSHGEEILTSGVDSPELPSSVSRSRGKHYNNKKWEGIDLNSLLDKQKGLSRR 118

Query: 438 GQQVKPRIKIKHSSSFRGKVVGKGSSMDASRPVLLQRMPNFQDPKVTPSLKVRLKSENRS 617
           G Q          SSF  +V  K +S             N   PK    L +  + ++R 
Sbjct: 119 GFQ--------QGSSFGQEVKPKPNS-------------NVNKPK-GGKLGLAFERKSRG 156

Query: 618 NRDGVKPCSGGSANTLSIPAXXXXXXXXXXXXXLDSHKCQSSIVDSRVSCTTTSNVPESI 797
             D +  CS   +++ S                  +HKC+ S   S ++   T    E  
Sbjct: 157 KTDSMVNCSNPPSSSSS------------------NHKCEGSTARSTITSENTQKYREVS 198

Query: 798 SNFGDSQKSSGSR--------ASNGSERFLPDSLALSDLSHQVFGKPCGLLSAVR--ISL 947
           S   D ++SS  R         +      LP    L     +V  +PC   S     IS+
Sbjct: 199 SKPFDQKRSSSIRRVSLGKSCVTRKVSSILPQKECL-----EVSSQPCDQKSRSSSVISV 253

Query: 948 RRSYVTRQPARVEV 989
           RRSYV+ + ++VE+
Sbjct: 254 RRSYVSGKASKVEI 267


>ref|XP_002521829.1| conserved hypothetical protein [Ricinus communis]
           gi|223539042|gb|EEF40639.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 373

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 27/44 (61%), Positives = 31/44 (70%)
 Frame = +3

Query: 144 IHDDHWAFLEEIEAPMWVDLNLLESTSGEQDINAGWFEQVHSFH 275
           I  DHWAFL+EIEAPMWVDL  LE+ S   D++ GWF   H FH
Sbjct: 10  ISRDHWAFLDEIEAPMWVDLT-LEANSNYTDVDDGWFHTSHLFH 52


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