BLASTX nr result

ID: Coptis23_contig00012249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012249
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514131.1| conserved hypothetical protein [Ricinus comm...   157   2e-36
ref|XP_002277637.1| PREDICTED: uncharacterized protein LOC100267...   150   2e-34
ref|XP_002281323.1| PREDICTED: uncharacterized protein LOC100266...   150   4e-34
emb|CBI27887.3| unnamed protein product [Vitis vinifera]              145   7e-33
gb|AFK37685.1| unknown [Medicago truncatula]                          141   1e-31

>ref|XP_002514131.1| conserved hypothetical protein [Ricinus communis]
           gi|223546587|gb|EEF48085.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score =  157 bits (397), Expect = 2e-36
 Identities = 80/128 (62%), Positives = 94/128 (73%), Gaps = 4/128 (3%)
 Frame = +2

Query: 2   FRSKSCGDGRMQIQTXXXXXXXXXXXXXXXSRPSSYGPQDLRCYSASYATS----QPQVQ 169
           FRS SC DGRMQIQ+               S       QDLRCYSASYA+S    Q Q+ 
Sbjct: 4   FRSNSCNDGRMQIQSYHGPSSLR-------SSSGVNSMQDLRCYSASYASSVHPTQTQMG 56

Query: 170 NKEMKFKKEKTSNGSSSKIWNFNDPELQRKKRVASYKVYSVEGKVKGSFRKNFRWLKERY 349
           N ++KFKK K++NGS SK W+FNDPELQRKKRVASYKVY+VEGKVKGSF+K+FRWLK+RY
Sbjct: 57  NNDVKFKKGKSTNGSVSKSWSFNDPELQRKKRVASYKVYTVEGKVKGSFKKSFRWLKDRY 116

Query: 350 TQVVYGWW 373
           T+VV+GWW
Sbjct: 117 TRVVHGWW 124


>ref|XP_002277637.1| PREDICTED: uncharacterized protein LOC100267009 [Vitis vinifera]
          Length = 117

 Score =  150 bits (380), Expect = 2e-34
 Identities = 78/126 (61%), Positives = 92/126 (73%), Gaps = 2/126 (1%)
 Frame = +2

Query: 2   FRSKSCGDGRMQIQTXXXXXXXXXXXXXXXSRPSSYGPQDLRCYSASYATS-QPQVQ-NK 175
           +RSKSC +GRMQI++                RP+  G  DLR YS SYA+S QP  Q  K
Sbjct: 4   YRSKSCREGRMQIESYYG------------GRPAPSGMHDLRSYSVSYASSSQPPTQMGK 51

Query: 176 EMKFKKEKTSNGSSSKIWNFNDPELQRKKRVASYKVYSVEGKVKGSFRKNFRWLKERYTQ 355
           E+K KK K+S G SSK W+FNDPELQRKKRVASYKVY+VEGK+KGSFRK+FRW+K+ YTQ
Sbjct: 52  EVKIKKGKSSFGPSSKSWSFNDPELQRKKRVASYKVYAVEGKMKGSFRKSFRWIKDTYTQ 111

Query: 356 VVYGWW 373
           VVYGWW
Sbjct: 112 VVYGWW 117


>ref|XP_002281323.1| PREDICTED: uncharacterized protein LOC100266443 [Vitis vinifera]
          Length = 116

 Score =  150 bits (378), Expect = 4e-34
 Identities = 73/123 (59%), Positives = 90/123 (73%)
 Frame = +2

Query: 2   FRSKSCGDGRMQIQTXXXXXXXXXXXXXXXSRPSSYGPQDLRCYSASYATSQPQVQNKEM 181
           FRSKSCGDGRMQ+++                 P+S G QDLRCYSASYA         + 
Sbjct: 4   FRSKSCGDGRMQMESYHGGGGG----------PTSTGMQDLRCYSASYAYPPQAQMGNDP 53

Query: 182 KFKKEKTSNGSSSKIWNFNDPELQRKKRVASYKVYSVEGKVKGSFRKNFRWLKERYTQVV 361
           KFKK K++NGS SK W+F+DPELQRKKRVASYKVY+VEGK+KGS +K+FRWLK+RYT+V+
Sbjct: 54  KFKKGKSTNGSLSKAWSFSDPELQRKKRVASYKVYAVEGKMKGSLKKSFRWLKDRYTRVI 113

Query: 362 YGW 370
           +GW
Sbjct: 114 HGW 116


>emb|CBI27887.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  145 bits (367), Expect = 7e-33
 Identities = 72/122 (59%), Positives = 89/122 (72%)
 Frame = +2

Query: 2   FRSKSCGDGRMQIQTXXXXXXXXXXXXXXXSRPSSYGPQDLRCYSASYATSQPQVQNKEM 181
           FRSKSCGDGRMQ+++                 P+S G QDLRCYSASYA         + 
Sbjct: 4   FRSKSCGDGRMQMESYHGGGGG----------PTSTGMQDLRCYSASYAYPPQAQMGNDP 53

Query: 182 KFKKEKTSNGSSSKIWNFNDPELQRKKRVASYKVYSVEGKVKGSFRKNFRWLKERYTQVV 361
           KFKK K++NGS SK W+F+DPELQRKKRVASYKVY+VEGK+KGS +K+FRWLK+RYT+V+
Sbjct: 54  KFKKGKSTNGSLSKAWSFSDPELQRKKRVASYKVYAVEGKMKGSLKKSFRWLKDRYTRVI 113

Query: 362 YG 367
           +G
Sbjct: 114 HG 115


>gb|AFK37685.1| unknown [Medicago truncatula]
          Length = 123

 Score =  141 bits (356), Expect = 1e-31
 Identities = 73/128 (57%), Positives = 92/128 (71%), Gaps = 5/128 (3%)
 Frame = +2

Query: 2   FRSKSCGDGRMQIQTXXXXXXXXXXXXXXXSRPSSYGPQDLRCYSASYATSQPQVQNK-- 175
           FRSKS  DGRMQI+                +  + YG QDLRCYSASYA+S    QN+  
Sbjct: 4   FRSKSYADGRMQIEPYSAPSNG--------ASSNVYGMQDLRCYSASYASSVHPTQNQIG 55

Query: 176 ---EMKFKKEKTSNGSSSKIWNFNDPELQRKKRVASYKVYSVEGKVKGSFRKNFRWLKER 346
              ++KFKK K++NGS+SK W+F+DPELQRKKRVASYKVYSVEGK+KGS RK+F+W+K+R
Sbjct: 56  NNNDVKFKKGKSTNGSTSKSWSFSDPELQRKKRVASYKVYSVEGKLKGSLRKSFKWIKDR 115

Query: 347 YTQVVYGW 370
             +VV+GW
Sbjct: 116 CNRVVHGW 123


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