BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012248
         (2837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup9...  1234   0.0  
ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|...  1123   0.0  
ref|XP_002303836.1| predicted protein [Populus trichocarpa] gi|2...  1107   0.0  
ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup9...  1071   0.0  
ref|XP_004140177.1| PREDICTED: nuclear pore complex protein Nup9...  1041   0.0  

>ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 [Vitis vinifera]
          Length = 1041

 Score = 1234 bits (3193), Expect = 0.0
 Identities = 621/925 (67%), Positives = 732/925 (79%), Gaps = 9/925 (0%)
 Frame = +1

Query: 88   VFSEAESYLPTLCSSDYYMVPSLKELEAREHTDPGYCCRVNDFTVGRSGYGFIKFLGQTD 267
            V  E E+ LPTL SS YYM P LKEL  RE  D G+C RV DFTVGR GYG +KFLG TD
Sbjct: 35   VHGEVEASLPTLRSSGYYMEPCLKELAKRELMDSGFCSRVQDFTVGRFGYGRVKFLGDTD 94

Query: 268  VRCLNIDEIVKFHRHGVVVYEDEKDKPAVGQGLNKVSIVTLILQVRLPTFGGKALDNIVR 447
            VR L++D+I++F RH VVVY DE  KP VGQGLNK + VTL+LQ+R  +F    L++IV 
Sbjct: 95   VRWLDLDQIIRFGRHEVVVYGDEGAKPEVGQGLNKAAEVTLVLQIRSSSFEEGRLNDIVE 154

Query: 448  KLRRKTERQGASFISFDPLSGEWKFMVPHFSKFGLXXXXXXXXXXXXL---QHPGXXXXX 618
            KLR  T+RQGA FISF+P +GEWKF+V HFS+FGL            +   QHP      
Sbjct: 155  KLRLCTKRQGADFISFNPSNGEWKFLVHHFSRFGLSEDDEEDIAMDDVTVVQHPLETNAH 214

Query: 619  XXXXXXXXXLVHPDGTVLLHSLPAHLRLDPNKMQEMRALMFSAEESEE--FDGTFSPEKQ 792
                     LV P+G VL HSLPAHL LDP KM+EMR +MF  +E E+  F G F   +Q
Sbjct: 215  EVSDIDEATLVEPNGAVLSHSLPAHLGLDPIKMKEMRMVMFPVDEEEDHDFSGEFKQREQ 274

Query: 793  SKSKDSARPALQYSALKMSHKNSPPSVRKTPLALLEYNTSNSNQSPPGSILMTSQNIFRP 972
            S +K+  RP L YSA +MSHK+     RKTPLALLEYN  + + S  G+ILM  QN   P
Sbjct: 275  SFNKEYIRPPLHYSARRMSHKSGSSVARKTPLALLEYNPGSVDSSSSGTILMAQQNKGMP 334

Query: 973  LKRTKVEGFKLDLKFETPITGSHSNNVVDAALFMGRSFRVGWGPNGILVHTGTPVGKTGS 1152
            LK TKVEGFKLDLK ETPIT SHS+N+VDAALFMGRSFRVGWGPNGILVH G  VG   S
Sbjct: 335  LKTTKVEGFKLDLKHETPITESHSHNIVDAALFMGRSFRVGWGPNGILVHAGAAVGGNDS 394

Query: 1153 WKGLSSVINMEKVALDKVVRDEDNKVKDELIDLCFISPLELHKSINYETKKIEVGSCRLK 1332
             + LSSVIN+EKVA+DKVVRDE+NKV+ EL+D CFISPL+LHK I +ETK++E+GS +L+
Sbjct: 395  QRVLSSVINLEKVAIDKVVRDENNKVRKELVDSCFISPLKLHKDIKHETKEVEIGSFKLR 454

Query: 1333 LQKIVSDCLMLPEICGGYIGIIERKLDVPGLTSSARTILMHQVMIWELIKVLFSARNIG- 1509
            LQ  VS+ LML EIC  YIGIIER+L+VP ++SSAR +LMHQVM+WELIKVLFSAR I  
Sbjct: 455  LQNPVSNRLMLSEICRSYIGIIERQLEVPEVSSSARVVLMHQVMVWELIKVLFSAREISG 514

Query: 1510 -NRKTDDDEDEEIMHGE-DISSEIDVEALPLVRRAGFSYWLQESVCHRVQDGISCLNESS 1683
             ++    D +E++MH   + SS++D+EALPL+RRA FSYWLQESVCHRVQD +S LNESS
Sbjct: 515  QSKSAGADNEEDMMHDRSEGSSDVDLEALPLIRRAEFSYWLQESVCHRVQDEVSSLNESS 574

Query: 1684 DLEHIFLLLTGRQLDASVELAASRGDVRLGCLLSQAGGSMVNRADVARQIDLWRINGLDF 1863
            DLE I LLLTGRQLDA+VELAASRGDVRL CLLSQAGGS +NRADVA+Q+DLWR NGLDF
Sbjct: 575  DLEQILLLLTGRQLDAAVELAASRGDVRLACLLSQAGGSTINRADVAQQLDLWRTNGLDF 634

Query: 1864 NFMEKDRIKLYELLAGNIQGALSDSQVDWKRYLGLLMWYQLPPDTSLPKIIDTYKQLLQD 2043
            NF+EKDRI+L+ELLAGNI GAL    +DWKR+LGLLMWYQLPPDTSLP +   Y+QLL D
Sbjct: 635  NFIEKDRIRLFELLAGNIHGALHGKNIDWKRFLGLLMWYQLPPDTSLPFVFRNYQQLLVD 694

Query: 2044 GGAPYPIPIYIDEGPLEEEVSWSLGDRFDLAYYLMLLHANEKTEFGLLKTMFSAFSSTYD 2223
            GGAP+P+P+YIDEGP+EE VSWS+G+R+DLAYYLMLLHA+E +EFGL KTMFSAFSST+D
Sbjct: 695  GGAPHPVPVYIDEGPVEEAVSWSVGERYDLAYYLMLLHASEGSEFGLGKTMFSAFSSTHD 754

Query: 2224 ALDYHMIWHQRAILEAVGVFSSNDLHVLDMSLVSQLLSVGLCHWAIYVVLQMPYRDDFPF 2403
             LDYHMIWHQRA+LEAVG FSSNDLHVLDM LVSQLL +G CHWAIYVVL MP+RDDFP+
Sbjct: 755  PLDYHMIWHQRAVLEAVGAFSSNDLHVLDMGLVSQLLCLGQCHWAIYVVLHMPFRDDFPY 814

Query: 2404 LQANLIREILFQYCEFWSSQEIQHQFIKELGVPSEWMNEAMAVYFQYQGDLPKALEHFLQ 2583
            LQA LIREILFQYCE W SQE+Q QF+++LG+P  W++EAMAVYF Y GDL +ALEH++ 
Sbjct: 815  LQATLIREILFQYCESWHSQELQRQFMEDLGIPLAWLHEAMAVYFNYCGDLSRALEHYIA 874

Query: 2584 SCNWQKAHSIFMTLVAHSLFLSAKHSEIWRIATSMEEHKPEIADWDLGAGLYIAFYHLRS 2763
              NWQKAHS+FMT VAHSLFLSAKHSEIWR+ATSME+HK EI  WDLGAG+YI+FY +RS
Sbjct: 875  CANWQKAHSLFMTSVAHSLFLSAKHSEIWRLATSMEDHKSEIEHWDLGAGVYISFYLIRS 934

Query: 2764 SL-EDLNLMSELDSLESRSEACRDF 2835
            SL E+ N M ELDSLES++ AC+DF
Sbjct: 935  SLQEENNTMCELDSLESKNAACKDF 959


>ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|223533319|gb|EEF35071.1|
            nucleoporin, putative [Ricinus communis]
          Length = 1067

 Score = 1123 bits (2905), Expect = 0.0
 Identities = 577/945 (61%), Positives = 701/945 (74%), Gaps = 14/945 (1%)
 Frame = +1

Query: 43   LNSQFKKIMRYPLGPVFS-----EAESYLPTLCSSDYYMVPSLKELEAREHTDPGYCCRV 207
            L +Q+KK    P     S     E E  LPTLCS+DYYM PSL +L A E  DPGYC RV
Sbjct: 40   LQTQYKKRRLSPNNDDVSCEISREIECSLPTLCSTDYYMEPSLTDLVAHELIDPGYCSRV 99

Query: 208  NDFTVGRSGYGFIKFLGQTDVRCLNIDEIVKFHRHGVVVYEDEKDKPAVGQGLNKVSIVT 387
             DF VGR G+G +KFLG TD+R L++D+IVKF RH +VVYED+ DKP VGQGLNK + VT
Sbjct: 100  PDFIVGRLGFGCVKFLGTTDLRWLDLDKIVKFRRHEIVVYEDDSDKPQVGQGLNKTAEVT 159

Query: 388  LILQVRLPTFGGKALDNIVRKLRRKTERQGASFISFDPLSGEWKFMVPHFSKFGLXXXXX 567
            L LQ+RL     + L+N V+KL+    RQGA FISF P +G+WKF+V HFS+FGL     
Sbjct: 160  LNLQIRLSDLNKRQLNNAVKKLKESAARQGAYFISFHPENGQWKFLVNHFSRFGLSDDEE 219

Query: 568  XXXXXXXL---QHPGXXXXXXXXXXXXXXLVHPDGTVLLHSLPAHLRLDPNKMQEMRALM 738
                   +   + P                + P G +L HSLPAHL LDP KM+EMR LM
Sbjct: 220  EDIAMDDVVAVEEPIEMGGTPETNEETQVELDPTGPMLYHSLPAHLGLDPVKMKEMRMLM 279

Query: 739  FSAEESEEFDGTFSPEKQ--SKSKDSARPALQYSALKMSHKNSPPSVRKTPLALLEYNTS 912
            F  EE EE +    P +Q  S  K+  + +L  S+ K+S +++ P +RK PLALL+Y  S
Sbjct: 280  FPVEEEEEVEHFNGPSRQKLSSGKEHIKHSLHNSSQKISQRSNTPVMRKMPLALLDYRPS 339

Query: 913  NSNQSPPGSILMTSQNIFRPLKRTKVEGFKLDLKFETPITGSHSNNVVDAALFMGRSFRV 1092
            + N S PG+ILM  QN   PLK  K EGFKL+L+ ETP+TGS+S N+VDA LFMGRSFRV
Sbjct: 340  SFNSSSPGAILMAQQNKGLPLKTVKGEGFKLNLEHETPMTGSYSRNIVDAGLFMGRSFRV 399

Query: 1093 GWGPNGILVHTGTPVGKTGSWKGLSSVINMEKVALDKVVRDEDNKVKDELIDLCFISPLE 1272
            GWGPNG+LVH+G PVG  G+ + LSSVIN+EKVA D+VVRDEDNK   +L++  F  PL 
Sbjct: 400  GWGPNGVLVHSGAPVGCNGTQRLLSSVINVEKVAFDRVVRDEDNKASKDLVEFAFDCPLN 459

Query: 1273 LHKSINYETKKIEVGSCRLKLQKIVSDCLMLPEICGGYIGIIERKLDVPGLTSSARTILM 1452
            LHK+IN+ETK++EVGS +LKLQK+VS+  ML EIC  YI IIER+L+VP L+S AR +LM
Sbjct: 460  LHKTINHETKEVEVGSFKLKLQKVVSNRKMLSEICRSYIDIIERQLEVPRLSSPARLVLM 519

Query: 1453 HQVMIWELIKVLFSAR-NIGNRKT--DDDEDEEIMHGEDISSEIDVEALPLVRRAGFSYW 1623
            HQVM+WELIKVLFS R N G  K+   D+E++ +   ++ S EID E+LPL+RRA FS W
Sbjct: 520  HQVMVWELIKVLFSERENSGQSKSMGADNEEDMMQDIKEGSLEIDQESLPLIRRAEFSCW 579

Query: 1624 LQESVCHRVQDGISCLNESSDLEHIFLLLTGRQLDASVELAASRGDVRLGCLLSQAGGSM 1803
            LQESVCHRVQ+ +S L+ESS LEHI LL+TGRQLD +VE+A SRGDVRL CLL QAGGSM
Sbjct: 580  LQESVCHRVQEEVSSLSESSYLEHILLLMTGRQLDGAVEIAVSRGDVRLACLLGQAGGSM 639

Query: 1804 VNRADVARQIDLWRINGLDFNFMEKDRIKLYELLAGNIQGALSDSQVDWKRYLGLLMWYQ 1983
            VNR DVARQ+DLWR NGLDFNF+EK+RI+LYEL++GNI  AL   ++DWKR+LGLLMWY+
Sbjct: 640  VNRTDVARQLDLWRNNGLDFNFIEKERIRLYELVSGNIHNALDGVKIDWKRFLGLLMWYR 699

Query: 1984 LPPDTSLPKIIDTYKQLLQDGGAPYPIPIYIDEGPLEEEVSWSLGDRFDLAYYLMLLHAN 2163
            L P TSLP I  TY+ LL DG APYP+PIYIDEGP EE V++S G  FDL+YYLMLLHA 
Sbjct: 700  LAPQTSLPIIFQTYQHLLNDGKAPYPLPIYIDEGPAEEAVNFS-GRHFDLSYYLMLLHAK 758

Query: 2164 EKTEFGLLKTMFSAFSSTYDALDYHMIWHQRAILEAVGVFSSNDLHVLDMSLVSQLLSVG 2343
               E G LKTMFSAFSST D LDYHMIWHQRAILEAVG+ +SN+L VLD+ LVSQLL +G
Sbjct: 759  GDGEIGYLKTMFSAFSSTNDPLDYHMIWHQRAILEAVGILTSNNLQVLDIGLVSQLLCIG 818

Query: 2344 LCHWAIYVVLQMPYRDDFPFLQANLIREILFQYCEFWSSQEIQHQFIKELGVPSEWMNEA 2523
             CHWAIYVVL MPYRDD+P+LQA +IREILFQYCE WS  E Q QFI+ L +P  W++EA
Sbjct: 819  QCHWAIYVVLHMPYRDDYPYLQATVIREILFQYCEIWSLDESQRQFIENLDIPRAWLHEA 878

Query: 2524 MAVYFQYQGDLPKALEHFLQSCNWQKAHSIFMTLVAHSLFLSAKHSEIWRIATSMEEHKP 2703
            MAV F Y G+L KALEH+L+  NWQKAHSIF+T VAH+LFLSA HSEIWR+ TSME+HK 
Sbjct: 879  MAVNFNYHGNLLKALEHYLECENWQKAHSIFITSVAHTLFLSANHSEIWRLTTSMEDHKS 938

Query: 2704 EIADWDLGAGLYIAFYHLRSSL-EDLNLMSELDSLESRSEACRDF 2835
            E+ +WDLGAG+Y++FY +RSS  E  N  SELDS ES++ ACRDF
Sbjct: 939  ELENWDLGAGIYLSFYLIRSSFQEGYNNTSELDSFESKNSACRDF 983


>ref|XP_002303836.1| predicted protein [Populus trichocarpa] gi|222841268|gb|EEE78815.1|
            predicted protein [Populus trichocarpa]
          Length = 1067

 Score = 1107 bits (2862), Expect = 0.0
 Identities = 578/957 (60%), Positives = 704/957 (73%), Gaps = 23/957 (2%)
 Frame = +1

Query: 34   SCELN---------SQFKK----IMRYPLGPVFSEAESYLPTLCSSDYYMVPSLKELEAR 174
            SCEL+          Q+KK    +   P    F   E+ LPTL S DYYM P L +L A 
Sbjct: 28   SCELDFEVETLNSEGQYKKRRTSLKSEPRCEDFRMVEALLPTLRSVDYYMEPCLMDLAAG 87

Query: 175  EHTDPGYCCRVNDFTVGRSGYGFIKFLGQTDVRCLNIDEIVKFHRHGVVVYEDEKDKPAV 354
            E  DPGYC RV DFTVGR GYG +KFLG+TDVR LN+D+IVKF+RH V+VYEDE  KP V
Sbjct: 88   EVVDPGYCSRVLDFTVGRFGYGRVKFLGKTDVRRLNLDQIVKFNRHEVIVYEDENAKPMV 147

Query: 355  GQGLNKVSIVTLILQVRLPTFGGKALDNIVRKLRRKTERQGASFISFDPLSGEWKFMVPH 534
            GQGLNK + V+L L+++L  F    ++++V KLR   ERQGA FISFDP+ GEWKF+V H
Sbjct: 148  GQGLNKPAEVSLTLKLKLLDFNKGRINDVVEKLRESMERQGAEFISFDPVIGEWKFLVCH 207

Query: 535  FSKFGLXXXXXXXXXXXX---LQHPGXXXXXXXXXXXXXXL--VHPDGTVLLHSLPAHLR 699
            FS+FGL               +Q P                  V  +  VL HSLPAHL 
Sbjct: 208  FSRFGLSGDDEEDITMDDAAEVQDPAEMKGGEIVDMDEETPEEVEANEPVLYHSLPAHLG 267

Query: 700  LDPNKMQEMRALMFSAEESEEFDGTFS-PEKQSKSKDSARPALQYSALKMSHKNSPPSVR 876
            LDP +M EMR  MF  +E E  +      +K   +K+S    LQ S  +MSH+ S P +R
Sbjct: 268  LDPVRMNEMRTWMFPDDEEEVVEDLIGLRQKFPYNKESIGSPLQNSTQRMSHRASSPVMR 327

Query: 877  KTPLALLEYNTSNSNQSPPGSILMTSQNIFRPLKRTKVEGFKLDLKFETPITGSHSNNVV 1056
            KTPLALLEY   + + S PG+IL+  Q+     K  K  GF L+L+ ETPI+GSHS NVV
Sbjct: 328  KTPLALLEYKPGSFDSSSPGTILLAQQHKGLTSKMMKGVGFTLNLEHETPISGSHSCNVV 387

Query: 1057 DAALFMGRSFRVGWGPNGILVHTGTPVGKTGSWKGLSSVINMEKVALDKVVRDEDNKVKD 1236
            DA LFMGRSFRVGWGPNG+LVH+G PVG   S + LSS+I++EKVALDKVVRDE+NK + 
Sbjct: 388  DAGLFMGRSFRVGWGPNGVLVHSGAPVGGNNSQRFLSSIIHVEKVALDKVVRDENNKSRK 447

Query: 1237 ELIDLCFISPLELHKSINYETKKIEVGSCRLKLQKIVSDCLMLPEICGGYIGIIERKLDV 1416
            EL+D  F SPL LHK+IN ETK++E+GS +LKLQK+VS+ LML EIC  YI I+ER+L+V
Sbjct: 448  ELVDFSFDSPLNLHKAINRETKEVEIGSFKLKLQKVVSNRLMLSEICRSYIDIVERQLEV 507

Query: 1417 PGLTSSARTILMHQVMIWELIKVLFSAR-NIGNRKT--DDDEDEEIMHGEDISSEIDVEA 1587
            P L+SSAR +LMHQVMIWELIKVLFS R N G  K+   D+E++ +   ++ S E+D EA
Sbjct: 508  PWLSSSARLVLMHQVMIWELIKVLFSERENSGQSKSVGADNEEDMMQDLKESSLEVDQEA 567

Query: 1588 LPLVRRAGFSYWLQESVCHRVQDGISCLNESSDLEHIFLLLTGRQLDASVELAASRGDVR 1767
            LPL+RRA FS WLQESVCHRVQD +S LNESS LEHIFLLLTGRQLDA+VE+AASRGDVR
Sbjct: 568  LPLIRRAEFSCWLQESVCHRVQDEVSSLNESSYLEHIFLLLTGRQLDAAVEMAASRGDVR 627

Query: 1768 LGCLLSQAGGSMVNRADVARQIDLWRINGLDFNFMEKDRIKLYELLAGNIQGALSDSQVD 1947
            L CLLSQAGG  +N AD+ARQ+DLWR NGLDFNF+EK+R++LYELL+GNI GAL D ++D
Sbjct: 628  LACLLSQAGG--LNHADIARQLDLWRSNGLDFNFIEKERVRLYELLSGNIHGALHDLKID 685

Query: 1948 WKRYLGLLMWYQLPPDTSLPKIIDTYKQLLQDGGAPYPIPIYIDEGPLEEEVSWSLGDRF 2127
            WKR+LGLLMWYQ+PP T LP I  TY+ L  +G APYP+PIYIDEGP++ +V +S    F
Sbjct: 686  WKRFLGLLMWYQMPPHTPLPIIFQTYQLLFVNGKAPYPLPIYIDEGPVDADVHFS-EKHF 744

Query: 2128 DLAYYLMLLHANEKTEFGLLKTMFSAFSSTYDALDYHMIWHQRAILEAVGVFSSNDLHVL 2307
            DL+YYLMLLHAN + EF  LKTM SAFSST+D LDYHMIWHQRA+LEAVG+F+S DL VL
Sbjct: 745  DLSYYLMLLHANGEGEFSALKTMLSAFSSTHDPLDYHMIWHQRAVLEAVGIFTSKDLQVL 804

Query: 2308 DMSLVSQLLSVGLCHWAIYVVLQMPYRDDFPFLQANLIREILFQYCEFWSSQEIQHQFIK 2487
            DM LVSQLL +G CHWAIYVVL MP  DD+P+L A +IREILFQYCE W S E Q +FI+
Sbjct: 805  DMGLVSQLLCIGQCHWAIYVVLHMPQCDDYPYLHATVIREILFQYCETWCSDESQQRFIE 864

Query: 2488 ELGVPSEWMNEAMAVYFQYQGDLPKALEHFLQSCNWQKAHSIFMTLVAHSLFLSAKHSEI 2667
             L +P  W++EAMAVYF Y GDL KALEH+L+  NWQKAHSIF+T VAH LFLSA HSEI
Sbjct: 865  NLDIPLSWLHEAMAVYFSYHGDLSKALEHYLECANWQKAHSIFVTSVAHKLFLSADHSEI 924

Query: 2668 WRIATSMEEHKPEIADWDLGAGLYIAFYHLRSSL-EDLNLMSELDSLESRSEACRDF 2835
            WR+A +ME+HK EIA+WDLGAG+YI+FY +++S  +D + MSELDS+ES++ ACRDF
Sbjct: 925  WRLAIAMEDHKSEIANWDLGAGIYISFYSIKNSFQDDTSTMSELDSIESKNSACRDF 981


>ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Glycine
            max]
          Length = 1022

 Score = 1071 bits (2770), Expect = 0.0
 Identities = 538/928 (57%), Positives = 681/928 (73%), Gaps = 7/928 (0%)
 Frame = +1

Query: 73   YPLGPVFSEAESYLPTLCSSDYYMVPSLKELEAREHTDPGYCCRVNDFTVGRSGYGFIKF 252
            +P   + +E E+ LP L SS YY  PSLKEL ARE  +PGYC RV DFTVGR GYG++++
Sbjct: 28   HPSIDIMTETEASLPILNSSGYYTKPSLKELVARELVEPGYCSRVPDFTVGRFGYGYVRY 87

Query: 253  LGQTDVRCLNIDEIVKFHRHGVVVYEDEKDKPAVGQGLNKVSIVTLILQVRLPTFGGKAL 432
            L +TDVR L IDEIVKFHRH +VVY DE DKPAVGQGLNK + V L+L   +        
Sbjct: 88   LNETDVRGLRIDEIVKFHRHEIVVYSDENDKPAVGQGLNKAAEVVLVLDSEILKSKEGKE 147

Query: 433  DNIVRKLRRKTERQGASFISFDPLSGEWKFMVPHFSKFGLXXXXXXXXXXXXLQHPGXXX 612
            D +V KL++ T+RQ A FISFD ++GEWKF+V HFS+FG              +      
Sbjct: 148  DVMVSKLKQITKRQKAQFISFDLVTGEWKFLVGHFSRFGFGDDDEEDIAMDDAE------ 201

Query: 613  XXXXXXXXXXXLVHPDGT---VLLHSLPAHLRLDPNKMQEMRALMFSAEESEEFDGTFSP 783
                          P  T    L HSLP+HLRLDP KM+EMR LMF  EE  E       
Sbjct: 202  ------VYDVEKESPSNTNELELSHSLPSHLRLDPVKMREMRLLMFPDEEEVEDLSC--- 252

Query: 784  EKQSKSKDSARPALQYSALKMSHKNSPPSVRKTPLALLEYNTSNSNQSPPGSILMTSQNI 963
             K S  K   RP LQ SA  ++H+++PP  RKTP  LLEY   N + + PG ILM  Q+ 
Sbjct: 253  -KSSSGKQYVRP-LQSSAQAINHRSTPPVARKTPFPLLEYKHGNFDSNSPGGILMVQQHK 310

Query: 964  FRPLKRTKVEGFKLDLKFETPITGSHSNNVVDAALFMGRSFRVGWGPNGILVHTGTPVGK 1143
              PL+  K +GFKLDLK ETP++G++++N+VDA LFMG+SFRVGWGPNGILVH+G PVG 
Sbjct: 311  GMPLRTIKSQGFKLDLKHETPVSGNYAHNIVDAGLFMGKSFRVGWGPNGILVHSGAPVGS 370

Query: 1144 TGSWKGLSSVINMEKVALDKVVRDEDNKVKDELIDLCFISPLELHKSINYETKKIEVGSC 1323
            +G+ K LSSV+N+EKVA D VVRDE+ KV +ELID   +SPL  HK IN+  K++E+G C
Sbjct: 371  SGNHKLLSSVVNLEKVAFDNVVRDENKKVTEELIDHALVSPLNFHKGINHVMKEVEIGPC 430

Query: 1324 RLKLQKIVSDCLMLPEICGGYIGIIERKLDVPGLTSSARTILMHQVMIWELIKVLFSARN 1503
            +L LQK+ ++   L EI   Y  +IER+L VPGL+S+ R  L HQVM WELI+VLFS R 
Sbjct: 431  KLTLQKLEANRSTLSEISHHYCDLIERQLSVPGLSSTTRLGLTHQVMTWELIRVLFSDRE 490

Query: 1504 IGNRKTD---DDEDEEIMHGEDISSEIDVEALPLVRRAGFSYWLQESVCHRVQDGISCLN 1674
               +      D+E++ +   ++I  ++D EALPL+RRA FSYWL+ESV + VQ+ IS LN
Sbjct: 491  QKGQVESLGADNEEDMMQDIKEICQDVDREALPLMRRAEFSYWLRESVSYHVQNQISSLN 550

Query: 1675 ESSDLEHIFLLLTGRQLDASVELAASRGDVRLGCLLSQAGGSMVNRADVARQIDLWRING 1854
            +S  L+HIF+LLTGRQLD +V+LA S+GDVRL CLLSQAGGS VNR+D+ARQ+D+WR  G
Sbjct: 551  DSDYLQHIFVLLTGRQLDEAVQLAVSKGDVRLACLLSQAGGSTVNRSDIARQLDIWRNKG 610

Query: 1855 LDFNFMEKDRIKLYELLAGNIQGALSDSQVDWKRYLGLLMWYQLPPDTSLPKIIDTYKQL 2034
            LDF+F+EKDR++LYELLAGNI  AL D ++DW+R+LGLLMWY+LPP+TSLP    TYK  
Sbjct: 611  LDFSFIEKDRLRLYELLAGNIHDALHDVKIDWRRFLGLLMWYKLPPNTSLPIAFQTYKHF 670

Query: 2035 LQDGGAPYPIPIYIDEGPLEEEVSWSLGDRFDLAYYLMLLHANEKTEFGLLKTMFSAFSS 2214
            + +G APYP+P++IDEG  EE +SW+  + FD+++YLMLLHANE+T+F  LK MFSAFSS
Sbjct: 671  VDEGTAPYPVPLFIDEGTSEEVISWNTDNHFDISFYLMLLHANEETKFSFLKAMFSAFSS 730

Query: 2215 TYDALDYHMIWHQRAILEAVGVFSSNDLHVLDMSLVSQLLSVGLCHWAIYVVLQMPYRDD 2394
            T D LDYHMIWHQRA+LEAVGV +SNDLH+LDMS VSQLL VG CHWA+YVVL +P R+D
Sbjct: 731  TPDPLDYHMIWHQRAVLEAVGVINSNDLHILDMSFVSQLLCVGKCHWALYVVLHLPLRED 790

Query: 2395 FPFLQANLIREILFQYCEFWSSQEIQHQFIKELGVPSEWMNEAMAVYFQYQGDLPKALEH 2574
            +P+L  NLIREILFQYCE WSS E Q QFI++LG+P++WM+EA+A+Y+ Y GD  KAL+ 
Sbjct: 791  YPYLHVNLIREILFQYCETWSSDESQQQFIEDLGIPTDWMHEALAIYYNYNGDHSKALDQ 850

Query: 2575 FLQSCNWQKAHSIFMTLVAHSLFLSAKHSEIWRIATSMEEHKPEIADWDLGAGLYIAFYH 2754
            FLQ  NWQKAH+IF+T VAH LFL AKH+EIWRIATSME+HK EI +W+LGAG+YI+FY 
Sbjct: 851  FLQCANWQKAHAIFITSVAHRLFLQAKHAEIWRIATSMEDHKSEIENWELGAGIYISFYL 910

Query: 2755 LRSSL-EDLNLMSELDSLESRSEACRDF 2835
            +R+SL +D N M+ELDSLES++ AC+DF
Sbjct: 911  MRNSLQDDTNAMTELDSLESKNAACQDF 938


>ref|XP_004140177.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Cucumis
            sativus] gi|449481026|ref|XP_004156060.1| PREDICTED:
            nuclear pore complex protein Nup98-Nup96-like [Cucumis
            sativus]
          Length = 1073

 Score = 1041 bits (2692), Expect = 0.0
 Identities = 542/927 (58%), Positives = 674/927 (72%), Gaps = 14/927 (1%)
 Frame = +1

Query: 97   EAESYLPTLCSSDYYMVPSLKELEAREHTDPGYCCRVNDFTVGRSGYGFIKFLGQTDVRC 276
            E ++  PTL S DYY+ PSL+E+      DP Y  +V DFT+GR GYG +KF G+TDVRC
Sbjct: 66   EHKNSFPTLQSPDYYISPSLEEMSIHVLKDPNYTSQVLDFTIGRCGYGSVKFFGKTDVRC 125

Query: 277  LNIDEIVKFHRHGVVVYEDEKDKPAVGQGLNKVSIVTLILQVRLPTFGGKALDNIVRKLR 456
            L++D+IVKFH++ V+VYEDE  KP VGQGLNK + VTL+LQ    +F G+  DN+V+KL+
Sbjct: 126  LDLDQIVKFHKNEVIVYEDETTKPIVGQGLNKPAEVTLVLQSITTSFLGRQFDNVVKKLK 185

Query: 457  RKTERQGASFISFDPLSGEWKFMVPHFSKFGLXXXXXXXXXXXX---LQHPGXXXXXXXX 627
              TERQGA FISF+P + EWKF V HFS+FGL               +Q P         
Sbjct: 186  YFTERQGAHFISFEPENCEWKFSVNHFSRFGLTEDEEEDVVMDDPNAVQEPAEINCNEIS 245

Query: 628  XXXXXXLVHPDGTVLLHSLPAHLRLDPNKMQEMRALMFSAEESEEFDGTFSP--EKQSKS 801
                   +    +VL HSLPAHL LDP KM+EMR ++F   E E  D   SP  +K    
Sbjct: 246  ENNENSPMDFTESVLCHSLPAHLGLDPVKMKEMRMVIFPENEQEFEDYNESPKFQKSFTG 305

Query: 802  KDSARPA-LQYSALKMSHKNSPPSVRKTPLALLEYNTSNSNQSPPGSILMTSQNIFRPLK 978
            ++  R    + S+ + + K +   VRKTPLALLEYN  + + + PGSILM+      P+K
Sbjct: 306  REYMRTTPFKDSSQRTNQKLNSLVVRKTPLALLEYNQGSLDSNSPGSILMSQPKKVTPVK 365

Query: 979  RTKVEGFKLDLKFETPITGSHSNNVVDAALFMGRSFRVGWGPNGILVHTGTPVGKTGSWK 1158
            R+K EGFKLDL  ETPIT  HS N+VDA LFMGRSFRVGWGPNGILVHTG  VG   S +
Sbjct: 366  RSKAEGFKLDLTHETPITLDHSRNIVDAGLFMGRSFRVGWGPNGILVHTGNLVGSKNSQR 425

Query: 1159 GLSSVINMEKVALDKVVRDEDNKVKDELIDLCFISPLELHKSINYETKKIEVGSCRLKLQ 1338
             LSS+IN+EKVA+D VVRDE+ K++ EL++  F  PL LHK +N+E ++ EVGS  LKLQ
Sbjct: 426  VLSSIINVEKVAIDNVVRDENRKMRKELVEYAFDLPLSLHKEMNHEFEE-EVGSFNLKLQ 484

Query: 1339 KIVSDCLMLPEICGGYIGIIERKLDVPGLTSSARTILMHQVMIWELIKVLFSAR-NIGNR 1515
            K+V + LML +IC  YI I+ER+L+VPGL+SSAR +L HQ+M+WELIKVLFS R N+GN 
Sbjct: 485  KVVFNRLMLSDICRSYIDIVERQLEVPGLSSSARLVLTHQIMVWELIKVLFSERENVGN- 543

Query: 1516 KTDDDEDEEIMHGEDI---SSEIDVEALPLVRRAGFSYWLQESVCHRVQDGISCLNESSD 1686
              D D +E++M  +DI   S E D+EALPL+RRA FS WLQESV  +VQ  +  L +SS 
Sbjct: 544  SLDSDNEEDMMQEQDIKEDSPEFDLEALPLIRRAEFSCWLQESVFPQVQYELGSLKDSSY 603

Query: 1687 LEHIFLLLTGRQLDASVELAASRGDVRLGCLLSQAGG----SMVNRADVARQIDLWRING 1854
            LEHIFLL+TGRQLDA+V+LA+S+GDVRL CLLSQAGG    S V R DVA Q+D+WR NG
Sbjct: 604  LEHIFLLMTGRQLDAAVQLASSKGDVRLACLLSQAGGFTVGSTVKRNDVALQLDIWRRNG 663

Query: 1855 LDFNFMEKDRIKLYELLAGNIQGALSDSQVDWKRYLGLLMWYQLPPDTSLPKIIDTYKQL 2034
            LDFNF+EK+R ++YELLAGNI  AL D  +DWKR+LGLLMWY+LPPDT+LP I  +Y+ L
Sbjct: 664  LDFNFIEKERTQVYELLAGNIFDALHDFDLDWKRFLGLLMWYRLPPDTTLPVIFHSYQHL 723

Query: 2035 LQDGGAPYPIPIYIDEGPLEEEVSWSLGDRFDLAYYLMLLHANEKTEFGLLKTMFSAFSS 2214
            L+ G AP P+P+Y D GP E  +  +  +  DL+Y+LMLLHANE  EFG LKTMFSAFSS
Sbjct: 724  LKSGRAPLPVPVYAD-GPQELVLKSNTNECLDLSYFLMLLHANEDPEFGFLKTMFSAFSS 782

Query: 2215 TYDALDYHMIWHQRAILEAVGVFSSNDLHVLDMSLVSQLLSVGLCHWAIYVVLQMPYRDD 2394
            T D LDYHMIWHQRA+LEA+G  SS DLH+LDM  VSQLL +G CHWAIYVVL MP+RDD
Sbjct: 783  TDDPLDYHMIWHQRAVLEAIGAISSKDLHILDMGFVSQLLCLGQCHWAIYVVLHMPFRDD 842

Query: 2395 FPFLQANLIREILFQYCEFWSSQEIQHQFIKELGVPSEWMNEAMAVYFQYQGDLPKALEH 2574
            FP LQA +I+EILFQYCE WSSQE Q +FI+ LGVP  W++EAMAV+F Y G+LP+ALEH
Sbjct: 843  FPHLQAKVIKEILFQYCEIWSSQESQFEFIENLGVPRIWLHEAMAVFFSYLGNLPEALEH 902

Query: 2575 FLQSCNWQKAHSIFMTLVAHSLFLSAKHSEIWRIATSMEEHKPEIADWDLGAGLYIAFYH 2754
            F++  NW KAH+IF T VAH LFLSA+HS+IW+ ATSME HK EI +W+ GAG+YI+FY 
Sbjct: 903  FIECRNWHKAHTIFTTSVAHKLFLSAEHSDIWKFATSMEMHKSEIENWEFGAGIYISFYS 962

Query: 2755 LRSSLEDLNLMSELDSLESRSEACRDF 2835
            LRSSL++    SELDSLESR+ AC +F
Sbjct: 963  LRSSLQENTEGSELDSLESRNAACGEF 989