BLASTX nr result

ID: Coptis23_contig00012225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012225
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247...   146   1e-32
emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]   136   1e-29
ref|XP_003555501.1| PREDICTED: uncharacterized protein LOC100814...   130   8e-28
ref|XP_003535450.1| PREDICTED: uncharacterized protein LOC100802...   130   8e-28
ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|2...   126   9e-27

>ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247804 [Vitis vinifera]
           gi|296083723|emb|CBI23712.3| unnamed protein product
           [Vitis vinifera]
          Length = 642

 Score =  146 bits (368), Expect = 1e-32
 Identities = 101/320 (31%), Positives = 164/320 (51%), Gaps = 10/320 (3%)
 Frame = -3

Query: 931 SLNNDKELAEKLISETASSKFKFLLGRVKAEKQLPSDSKQQLISKRCIQQSLLQSEHVTD 752
           SL  D+E A+    + + SK K L  + ++E+ +  + K+ L S+  ++       H  +
Sbjct: 30  SLGEDRESAQGNDLDFSESKSKRLARKGRSEQAVILNVKK-LQSRGSVKVESFT--HGLN 86

Query: 751 HRIPKYLRFVNLDEKFLQHCLDLVEFRAANSLSMICSPAVPCNVAVNLRSSKQVFYDNHL 572
           +R+PK++  ++LDE++L+ CL+L+   A        S A PCN+++NL S K   + + L
Sbjct: 87  NRMPKHI--MSLDERYLRRCLELIHISA--------SKAAPCNISLNLSSLKMGIFSDTL 136

Query: 571 EPHRNTRRNRSDLGNFVVHCPSATRSG--------QWILKTVDENKCGKNVLNDSLLRHF 416
              +   RN  D+   V+ CP AT +G        QW++ T+  +K    +L   L R F
Sbjct: 137 NLPKFRGRNTCDMSKLVIECPVATGTGDVVVSPAGQWVVGTLMGSKSMMKILKSPLFRQF 196

Query: 415 GAL-GSIVMRRVGLIDVKGTKDSGFMSFPSRPSLRSLQKPETGTAYVENPRSGSKSLNKH 239
           GAL   +      LID KG   + F+S P   S+RS Q    G     N R G ++++K 
Sbjct: 197 GALEDDVKFGGTSLIDAKGAMCTDFISSPGGLSIRSPQNLPKGNISQGNHRYGPEAVHKR 256

Query: 238 IFAISN-GVXXXXXXXXXXXXXXSQGTLQREWENGVPYFKYSVDDQRVVYVSKTVESEFS 62
           + + S+                 SQG LQ  W+ G+P+F +SVDDQR VYV+   ++E  
Sbjct: 257 LISTSSTNSTCSDQSPSSGFATVSQGMLQCTWKGGIPHFVFSVDDQREVYVANQWKAELP 316

Query: 61  ENMPLDCVYLFYKKKVGGKE 2
           ++  LDC+YLF+ +  G KE
Sbjct: 317 DDKALDCMYLFHSRTGGQKE 336


>emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]
          Length = 597

 Score =  136 bits (342), Expect = 1e-29
 Identities = 86/259 (33%), Positives = 133/259 (51%), Gaps = 10/259 (3%)
 Frame = -3

Query: 748 RIPKYLRFVNLDEKFLQHCLDLVEFRAANSLSMICSPAVPCNVAVNLRSSKQVFYDNHLE 569
           R+PK++  ++LDE++L+ CL+L+   A        S A PCN+++NL S K   + + L 
Sbjct: 43  RMPKHI--MSLDERYLRRCLELIHISA--------SKAAPCNISLNLSSLKMGIFSDTLN 92

Query: 568 PHRNTRRNRSDLGNFVVHCPSATRSG--------QWILKTVDENKCGKNVLNDSLLRHFG 413
             +   RN  D+   V+ CP AT +G        QW++ T+  +K    +L   L R FG
Sbjct: 93  LPKFRGRNTCDMSKLVIECPVATGTGDVVVSPAGQWVVGTLMGSKSMMKILKSPLFRQFG 152

Query: 412 AL-GSIVMRRVGLIDVKGTKDSGFMSFPSRPSLRSLQKPETGTAYVENPRSGSKSLNKHI 236
           AL   +      LID KG   + F+S P   S+RS Q    G     N   G ++++K +
Sbjct: 153 ALEDDVKFGGTSLIDAKGAMCTDFISSPGGLSIRSPQNLPKGNISQGNHIYGPEAVHKRL 212

Query: 235 FAISN-GVXXXXXXXXXXXXXXSQGTLQREWENGVPYFKYSVDDQRVVYVSKTVESEFSE 59
            + S+                 SQG LQ  W+ G+P+F +SVDDQR VYV+   ++E  +
Sbjct: 213 ISTSSTNSTCSDQSPSSGFATVSQGMLQCTWKGGIPHFVFSVDDQREVYVANQWKAELPD 272

Query: 58  NMPLDCVYLFYKKKVGGKE 2
           +  LDC+YLF+ +  G KE
Sbjct: 273 DKALDCMYLFHSRTGGQKE 291


>ref|XP_003555501.1| PREDICTED: uncharacterized protein LOC100814338 [Glycine max]
          Length = 624

 Score =  130 bits (326), Expect = 8e-28
 Identities = 96/331 (29%), Positives = 158/331 (47%), Gaps = 12/331 (3%)
 Frame = -3

Query: 961 KTGEGEEPHC-SLNNDKELAEKLISETASSKFKFLLGRVKAEKQLPSDSKQQLISKRCIQ 785
           K G G +     L ND+E++E+   +++ S+ K L+ R  + + +  ++ Q  ISK  ++
Sbjct: 10  KEGHGRKDSLRGLLNDREISEE--EDSSKSQLKKLIKRSNSHRAIVVNAIQSQISKVFLK 67

Query: 784 QSLLQSEHVTDHRIPKYLRFVNLDEKFLQHCLDLVEFRAANSLSMICSPAVPCNVAVNLR 605
              +Q  H  D+RIPK++  V++DEK++  CL+ +   A          A   N+  +LR
Sbjct: 68  DLFVQRVHGLDNRIPKHV--VSVDEKYIHRCLEFIHNTALK--------AAQFNIPESLR 117

Query: 604 SSKQVFYDNHLEPHRNTRRNRSDLGNFVVHCPSATRSG----------QWILKTVDENKC 455
           ++        L   +    N    G+FV  CP  T +G          QW L T+  +K 
Sbjct: 118 ATNMETLSESLNTAKFFGGNACGSGHFVFECPVVTETGRVVISANAGDQWTLGTIMGSKS 177

Query: 454 GKNVLNDSLLRHFGALGSIV-MRRVGLIDVKGTKDSGFMSFPSRPSLRSLQKPETGTAYV 278
             N+LN +LL+ FGA      + R+   D +G     FM  PS   + S  K E     V
Sbjct: 178 MINILNSTLLQQFGASHRTDNLNRMNFSDPEGLVCYDFMDSPSDLCISSSYKLEKEKQLV 237

Query: 277 ENPRSGSKSLNKHIFAISNGVXXXXXXXXXXXXXXSQGTLQREWENGVPYFKYSVDDQRV 98
            + + G  S++K + + S+                SQG +Q  W+ G+P+F +S DDQ+ 
Sbjct: 238 RSHKYGPISVHKRLVSTSSTTSTCSDWLSSTSSNLSQGMIQCTWKQGIPHFVFSADDQKE 297

Query: 97  VYVSKTVESEFSENMPLDCVYLFYKKKVGGK 5
           VYV+K  + + ++N  LD VY F+  K G K
Sbjct: 298 VYVTKLRKVDSTDNKALDYVYEFHLNKGGQK 328


>ref|XP_003535450.1| PREDICTED: uncharacterized protein LOC100802721 [Glycine max]
          Length = 409

 Score =  130 bits (326), Expect = 8e-28
 Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 11/319 (3%)
 Frame = -3

Query: 928 LNNDKELAEKLISETASSKFKFLLGRVKAEKQLPSDSKQQLISKRCIQQSLLQSEHVTDH 749
           L ND+E++E+   E++ S+ K L+ R  + + +  ++ Q  ISK   +    +  H  D+
Sbjct: 22  LLNDREISEE---ESSKSQLKKLIKRSNSHRAIVVNAIQSQISKVFFKDLFFRRVHGLDN 78

Query: 748 RIPKYLRFVNLDEKFLQHCLDLVEFRAANSLSMICSPAVPCNVAVNLRSSKQVFYDNHLE 569
           RIPK++  V++DEK+++ CL+ +   A          A   N+  +LR++        L 
Sbjct: 79  RIPKHV--VSVDEKYIRRCLEFIHNTALK--------AAQFNIPESLRATNMETLSESLN 128

Query: 568 PHRNTRRNRSDLGNFVVHCPSATRSG----------QWILKTVDENKCGKNVLNDSLLRH 419
             +    N   LG+FV  CP AT +G          QW L ++  +K   N+LN +LL+ 
Sbjct: 129 TVKFFGGNACGLGHFVFECPVATENGRVVISANAGDQWTLGSIMGSKSMINILNSTLLQQ 188

Query: 418 FGALGSIV-MRRVGLIDVKGTKDSGFMSFPSRPSLRSLQKPETGTAYVENPRSGSKSLNK 242
           FGA      + R+   D +G     FM  PS   + S  K       V + + GS S++K
Sbjct: 189 FGASHRTDNLNRMNFSDPEGLVCYDFMDSPSDLCISSSHKLGKEKQLVRSHKYGSISVHK 248

Query: 241 HIFAISNGVXXXXXXXXXXXXXXSQGTLQREWENGVPYFKYSVDDQRVVYVSKTVESEFS 62
            + + S+                SQG +Q  W+ G+P+F +S DDQ+ VYV+K  + + +
Sbjct: 249 RLVSTSSTTSTSSDWLSSTSSTLSQGMIQCSWKQGIPHFVFSADDQKEVYVAKLKKVDST 308

Query: 61  ENMPLDCVYLFYKKKVGGK 5
           +N  LD VY F+  K G K
Sbjct: 309 DNKALDYVYEFHLNKGGQK 327


>ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|222864626|gb|EEF01757.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  126 bits (317), Expect = 9e-27
 Identities = 90/283 (31%), Positives = 138/283 (48%), Gaps = 9/283 (3%)
 Frame = -3

Query: 823 DSKQQLISKRCIQQSLLQSEHVTDHRIPKYLRFVNLDEKFLQHCLDLVEFRAANSLSMIC 644
           D KQ   SK CI+ S L+S HV D+ IPK++  + +DEK+L+ CL+ +            
Sbjct: 35  DFKQLQRSKSCIKDSFLRSIHVLDNWIPKHI--ITIDEKYLRRCLEFIHAST-------- 84

Query: 643 SPAVPCNVAVNLRSSKQVFYDNHLEPHRNTRRNRSDLGNFVVHCPSA-------TRSGQW 485
           S A PCN ++ L      F+ + L   +   +N      F   CP A       + + QW
Sbjct: 85  SQAAPCNASMYLDWGNMGFFSDGLNIAKIGNQNTCSSAGFDFDCPLAGTGSVVISPAEQW 144

Query: 484 ILKTVDENKCGKNVLNDSLLRHFGAL-GSIVMRRVGLIDVKGTKDSGFMSFPSRPSLRSL 308
           I  ++  +K   N+L   LLR +GA  G     +V   DVKG+    FM+ P   S  S 
Sbjct: 145 IAGSIMGSKSMVNILKSPLLRRYGAYDGDANFEKVTSSDVKGSICYDFMNSPGGLSSYSP 204

Query: 307 QKPETGTAYVENPRSGSKSLNKHIFAISN-GVXXXXXXXXXXXXXXSQGTLQREWENGVP 131
            K + G     + +  S+SL+K   ++S+                 +QGTLQ  W+ G P
Sbjct: 205 HKLDNGAQTPGSHKYESESLHKRFVSMSSTNSTCSDQSSSSLPAAVTQGTLQCTWKGGNP 264

Query: 130 YFKYSVDDQRVVYVSKTVESEFSENMPLDCVYLFYKKKVGGKE 2
           +F +S+DDQ+VVYV+       +++  L+ VYLF+ +K G KE
Sbjct: 265 HFIFSLDDQKVVYVANFYNVNSADDKALEYVYLFHSRKGGQKE 307


Top