BLASTX nr result

ID: Coptis23_contig00012218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012218
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303679.1| predicted protein [Populus trichocarpa] gi|2...   182   7e-44
emb|CBI34563.3| unnamed protein product [Vitis vinifera]              171   2e-40
emb|CAN74602.1| hypothetical protein VITISV_028112 [Vitis vinifera]   171   2e-40
ref|XP_004146200.1| PREDICTED: transcription factor bHLH157-like...   159   6e-37
ref|XP_003535397.1| PREDICTED: uncharacterized protein LOC100813...   149   9e-34

>ref|XP_002303679.1| predicted protein [Populus trichocarpa] gi|222841111|gb|EEE78658.1|
           predicted protein [Populus trichocarpa]
          Length = 831

 Score =  182 bits (463), Expect = 7e-44
 Identities = 87/181 (48%), Positives = 124/181 (68%)
 Frame = -3

Query: 581 MSTRIGDVLKNLCCNNGWSYGIFWSVDRQNSMLLTIDDAYFGETFGMDINNMLQQVRVLG 402
           M   + + LK+LCC+NGWSYG+FW  D++NSMLLT++DAY+ E  G+ +NNML + R+LG
Sbjct: 1   MGLVLKEKLKSLCCSNGWSYGVFWCFDQRNSMLLTMEDAYYEEEMGVVVNNMLSEARMLG 60

Query: 401 EGIVGEAACTGKHQWLFSDTFCHEWGPMGSVTNQNVFQDISEFNRQFSSGIKTIALITLA 222
           EGIVG+AA TGKHQW+FSD     W    S+  Q++FQD SE +RQFSSGIKTIA+I++ 
Sbjct: 61  EGIVGQAASTGKHQWIFSDASDGGWNSAASIGGQDIFQDDSEIHRQFSSGIKTIAVISVE 120

Query: 221 PHGIMQFGSTEKIRESLDFVNHIRYMFQQLISAEGQLSRHASMPLNHEVYGPSTCANYDI 42
             G++QFGST+KI ES +F+   + +F ++ +  G  S       N +      C +YD+
Sbjct: 121 SQGLVQFGSTQKILESEEFLGQTKRLFGKMENINGLTS-------NSDSPSSLNCESYDL 173

Query: 41  S 39
           +
Sbjct: 174 N 174


>emb|CBI34563.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  171 bits (433), Expect = 2e-40
 Identities = 82/176 (46%), Positives = 123/176 (69%), Gaps = 2/176 (1%)
 Frame = -3

Query: 584 RMSTRIGDVLKNLCCNNGWSYGIFWSVDRQNSMLLTIDDAYFGETFGMDINNMLQQVRVL 405
           +M + +   LK+LCC+NGW+YG+FW  D +NSMLLT +DAY+ E  G+ I++ML +V  L
Sbjct: 6   KMESVLKKTLKSLCCSNGWTYGVFWRFDERNSMLLTSEDAYYDEQMGVVIDSMLSKVHTL 65

Query: 404 GEGIVGEAACTGKHQWLFSDTFCHEWGPMGSVTNQNVFQDISEFNRQFSSG-IKTIALIT 228
            EGI+G+ A TGKH W+FSD    EW  + S+  +++ QD SE +RQFSSG IKTIA+I 
Sbjct: 66  REGIIGQVAFTGKHCWVFSDAQSGEWNSLCSIDGEDISQDDSEIHRQFSSGIIKTIAVIP 125

Query: 227 LAPHGIMQFGSTEKIRESLDFVNHIRYMFQQLISAEG-QLSRHASMPLNHEVYGPS 63
           + P G++QFGS +KI E L+F++  + +F+++ + +G  +  +A   LN E+Y PS
Sbjct: 126 VEPRGVVQFGSNQKIVERLEFLDLTKRLFREMENIDGLMVLSNAPSALNSEIYDPS 181


>emb|CAN74602.1| hypothetical protein VITISV_028112 [Vitis vinifera]
          Length = 893

 Score =  171 bits (433), Expect = 2e-40
 Identities = 82/176 (46%), Positives = 123/176 (69%), Gaps = 2/176 (1%)
 Frame = -3

Query: 584 RMSTRIGDVLKNLCCNNGWSYGIFWSVDRQNSMLLTIDDAYFGETFGMDINNMLQQVRVL 405
           +M + +   LK+LCC+NGW+YG+FW  D +NSMLLT +DAY+ E  G+ I++ML +V  L
Sbjct: 6   KMESVLKKTLKSLCCSNGWTYGVFWRFDERNSMLLTSEDAYYDEQMGVVIDSMLSKVHTL 65

Query: 404 GEGIVGEAACTGKHQWLFSDTFCHEWGPMGSVTNQNVFQDISEFNRQFSSG-IKTIALIT 228
            EGI+G+ A TGKH W+FSD    EW  + S+  +++ QD SE +RQFSSG IKTIA+I 
Sbjct: 66  REGIIGQVAFTGKHCWVFSDAQSGEWNSLCSIDGEDISQDDSEIHRQFSSGIIKTIAVIP 125

Query: 227 LAPHGIMQFGSTEKIRESLDFVNHIRYMFQQLISAEG-QLSRHASMPLNHEVYGPS 63
           + P G++QFGS +KI E L+F++  + +F+++ + +G  +  +A   LN E+Y PS
Sbjct: 126 VEPRGVVQFGSNQKIVERLEFLDLTKRLFREMENIDGLMVLSNAPSALNSEIYDPS 181


>ref|XP_004146200.1| PREDICTED: transcription factor bHLH157-like [Cucumis sativus]
          Length = 772

 Score =  159 bits (403), Expect = 6e-37
 Identities = 75/153 (49%), Positives = 105/153 (68%)
 Frame = -3

Query: 575 TRIGDVLKNLCCNNGWSYGIFWSVDRQNSMLLTIDDAYFGETFGMDINNMLQQVRVLGEG 396
           T +G VL  +CC+N WSYG+FWS DR+NSMLLT++D ++ E   +   NMLQQV +LGEG
Sbjct: 4   TELGSVLNRICCSNHWSYGVFWSFDRRNSMLLTLEDIWYEEQVVLVAANMLQQVHMLGEG 63

Query: 395 IVGEAACTGKHQWLFSDTFCHEWGPMGSVTNQNVFQDISEFNRQFSSGIKTIALITLAPH 216
           ++G AA TGKHQW+FSD    EW       N ++FQD  E  +QFS G+KT+A+I + PH
Sbjct: 64  VIGTAAFTGKHQWIFSDASNGEW-------NSSMFQDNLELQQQFSYGVKTVAVIPVHPH 116

Query: 215 GIMQFGSTEKIRESLDFVNHIRYMFQQLISAEG 117
           G++Q GST KI ESL+ + + +    ++I+  G
Sbjct: 117 GVIQLGSTHKIWESLEILANAKRSLCEVINGGG 149


>ref|XP_003535397.1| PREDICTED: uncharacterized protein LOC100813558 [Glycine max]
          Length = 797

 Score =  149 bits (376), Expect = 9e-34
 Identities = 79/184 (42%), Positives = 113/184 (61%), Gaps = 1/184 (0%)
 Frame = -3

Query: 581 MSTRIGDVLKNLC-CNNGWSYGIFWSVDRQNSMLLTIDDAYFGETFGMDINNMLQQVRVL 405
           M   + + LK LC C +GWSY IFW    +NS+LLT+++AY+ E  G +I NM  QV +L
Sbjct: 1   MPLTLRNKLKTLCTCGDGWSYAIFWRFHPRNSLLLTVEEAYYEEHLGEEIANMHPQVHLL 60

Query: 404 GEGIVGEAACTGKHQWLFSDTFCHEWGPMGSVTNQNVFQDISEFNRQFSSGIKTIALITL 225
           GEGIVGEAA TGKH W+ SD   H+W    ++T QN+ +D SEF +QFSSGIKTI ++ +
Sbjct: 61  GEGIVGEAASTGKHSWVHSDGQTHDW----NLTGQNICEDDSEFQQQFSSGIKTIVVVPV 116

Query: 224 APHGIMQFGSTEKIRESLDFVNHIRYMFQQLISAEGQLSRHASMPLNHEVYGPSTCANYD 45
              G++QFGS +KI E ++F+   + +   +    G       MP N  +  P  C N D
Sbjct: 117 KAWGVVQFGSRKKILEKVEFLEQTQSVLTDMDDDMGMF----DMPGNSVL--PLDCENND 170

Query: 44  ISNI 33
           ++ +
Sbjct: 171 LNGL 174


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