BLASTX nr result

ID: Coptis23_contig00012215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012215
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283153.2| PREDICTED: uridine nucleosidase 1-like [Viti...   530   e-148
ref|XP_003625788.1| Inosine-uridine preferring ribonucleoside hy...   517   e-144
ref|XP_002309047.1| predicted protein [Populus trichocarpa] gi|2...   511   e-142
ref|XP_002881439.1| inosine-uridine preferring nucleoside hydrol...   508   e-141
ref|NP_565843.1| Uridine nucleosidase 1 [Arabidopsis thaliana] g...   506   e-141

>ref|XP_002283153.2| PREDICTED: uridine nucleosidase 1-like [Vitis vinifera]
            gi|297740083|emb|CBI30265.3| unnamed protein product
            [Vitis vinifera]
          Length = 342

 Score =  530 bits (1366), Expect = e-148
 Identities = 263/324 (81%), Positives = 287/324 (88%)
 Frame = +2

Query: 56   VVEKSNNKLEKVIIDTDPGIDDSMAILMAFQTPELEVLGLTTIFGNCTTKDATRNALLLC 235
            VV  S  + +KVIIDTDPGIDDSMAILMAFQTPELE+LGLTT+FGN TTKDATRNALLLC
Sbjct: 19   VVSNSPVQPDKVIIDTDPGIDDSMAILMAFQTPELEILGLTTVFGNVTTKDATRNALLLC 78

Query: 236  EIAGRADVPVAEGSSEPLKGGEPRVADFVHGSDGLGNIXXXXXXXXXXXXXXAVEFLIDK 415
            EIAGR DVPVAEGSS PLKGGEPRVADF+HGSDGLGNI              A EFL+DK
Sbjct: 79   EIAGRPDVPVAEGSSGPLKGGEPRVADFIHGSDGLGNIFLPQPKAKKIEKN-AAEFLVDK 137

Query: 416  ISEFPGEVSVLALGPLTNLALAIKSDSSFASKVKRIVVLGGSFFALGNVNPAAEANIYGD 595
            +SE+PGEVS+LALGPLTN+ALAIK DSSFASKVK++VVLGG+FFALGNVNPAAEANIYGD
Sbjct: 138  VSEYPGEVSILALGPLTNVALAIKRDSSFASKVKKVVVLGGAFFALGNVNPAAEANIYGD 197

Query: 596  PEAADVVFTCGANIDIVGINITTQVKLTDEDLSELRESKGRHAQFISDICKFYRDWHVQS 775
            PEAADVVFT GANI +VGINITTQ+K TD DL +LR S+GR+AQFISDICKFYRDWHV+S
Sbjct: 198  PEAADVVFTSGANIVVVGINITTQIKFTDADLHQLRHSEGRYAQFISDICKFYRDWHVKS 257

Query: 776  DGVYGIFLHDPVSFVALVQPDLFTYKKGVVRVETQGICEGHTLMDQGLKRWNADNPWLGY 955
            DGVYGIFLHDPVSF ALV+PDLFTYK+GVVRVETQGIC GHTLMDQGLK WN+ NPW GY
Sbjct: 258  DGVYGIFLHDPVSFAALVRPDLFTYKEGVVRVETQGICLGHTLMDQGLKIWNSSNPWTGY 317

Query: 956  SPVSVAWTVDVENVLTYIKKMLMK 1027
            SPVSVAWTVDV+ VL YIKK+LMK
Sbjct: 318  SPVSVAWTVDVDGVLNYIKKLLMK 341


>ref|XP_003625788.1| Inosine-uridine preferring ribonucleoside hydrolase [Medicago
            truncatula] gi|355500803|gb|AES82006.1| Inosine-uridine
            preferring ribonucleoside hydrolase [Medicago truncatula]
          Length = 334

 Score =  517 bits (1331), Expect = e-144
 Identities = 253/335 (75%), Positives = 291/335 (86%)
 Frame = +2

Query: 26   ISNVVEEDGGVVEKSNNKLEKVIIDTDPGIDDSMAILMAFQTPELEVLGLTTIFGNCTTK 205
            ++ +V    G V+   +K EK+IIDTDPGIDDSMAILMAF  PE+EV+GLTT+FGN  T+
Sbjct: 1    MNGLVNNGNGGVKAVLDKAEKLIIDTDPGIDDSMAILMAFHCPEVEVIGLTTVFGNAQTE 60

Query: 206  DATRNALLLCEIAGRADVPVAEGSSEPLKGGEPRVADFVHGSDGLGNIXXXXXXXXXXXX 385
            DATRNALLLCEIAGR +VPVAEGS+EPLKGG PRVADFVHG DGLGN+            
Sbjct: 61   DATRNALLLCEIAGRQNVPVAEGSTEPLKGGRPRVADFVHGKDGLGNLFLPDPKTNKIDK 120

Query: 386  XXAVEFLIDKISEFPGEVSVLALGPLTNLALAIKSDSSFASKVKRIVVLGGSFFALGNVN 565
              A EFL++K+SE PGEV+VLALGPLTN+ALAIK DSSFASKVKRIVVLGG+FFALGNVN
Sbjct: 121  S-ASEFLVEKVSESPGEVTVLALGPLTNIALAIKRDSSFASKVKRIVVLGGAFFALGNVN 179

Query: 566  PAAEANIYGDPEAADVVFTCGANIDIVGINITTQVKLTDEDLSELRESKGRHAQFISDIC 745
            PAAEANIYGDPEAADVVFT GA++ +VGINITTQV+LTD DL EL+ESKG+HA  +SD+C
Sbjct: 180  PAAEANIYGDPEAADVVFTSGADVVVVGINITTQVQLTDADLLELKESKGKHASLLSDMC 239

Query: 746  KFYRDWHVQSDGVYGIFLHDPVSFVALVQPDLFTYKKGVVRVETQGICEGHTLMDQGLKR 925
            KFYRDWHV+SDGVYGIFLHDPVSFVA+V+PDLFTYKKGVVRVETQG+C GHTL+DQGLKR
Sbjct: 240  KFYRDWHVKSDGVYGIFLHDPVSFVAVVRPDLFTYKKGVVRVETQGLCVGHTLLDQGLKR 299

Query: 926  WNADNPWLGYSPVSVAWTVDVENVLTYIKKMLMKP 1030
            WN+ NPW GYSP+SVAWTV+VE VL+YIK++LMKP
Sbjct: 300  WNSSNPWTGYSPISVAWTVNVEGVLSYIKELLMKP 334


>ref|XP_002309047.1| predicted protein [Populus trichocarpa] gi|222855023|gb|EEE92570.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score =  511 bits (1316), Expect = e-142
 Identities = 254/328 (77%), Positives = 285/328 (86%)
 Frame = +2

Query: 44   EDGGVVEKSNNKLEKVIIDTDPGIDDSMAILMAFQTPELEVLGLTTIFGNCTTKDATRNA 223
            E  GV+  S  K EK+IIDTDPGIDD+MAILMAFQ+PELEVLGLTTIFGN +T+DATRNA
Sbjct: 25   ERDGVLAGSTAKPEKLIIDTDPGIDDTMAILMAFQSPELEVLGLTTIFGNVSTEDATRNA 84

Query: 224  LLLCEIAGRADVPVAEGSSEPLKGGEPRVADFVHGSDGLGNIXXXXXXXXXXXXXXAVEF 403
            LLLCEIAGR DVPVAEGS EPLKGG P V DF+HGSDGLGN               A EF
Sbjct: 85   LLLCEIAGRPDVPVAEGSPEPLKGGIPTVPDFIHGSDGLGNTFLSPPKAKKIGKS-ASEF 143

Query: 404  LIDKISEFPGEVSVLALGPLTNLALAIKSDSSFASKVKRIVVLGGSFFALGNVNPAAEAN 583
            L+DK+SE+PGEVS+LALGPLTNLALAIK DSSFASKVKRIVVLGG+FFALGNVNPAAEAN
Sbjct: 144  LLDKVSEYPGEVSILALGPLTNLALAIKRDSSFASKVKRIVVLGGAFFALGNVNPAAEAN 203

Query: 584  IYGDPEAADVVFTCGANIDIVGINITTQVKLTDEDLSELRESKGRHAQFISDICKFYRDW 763
            I+GDPEAAD+VFT GANI +VGINITTQVK TD DL ELR+SKG++A+ +SD+CKFYRDW
Sbjct: 204  IHGDPEAADLVFTSGANIVVVGINITTQVKFTDGDLLELRQSKGKYAKILSDMCKFYRDW 263

Query: 764  HVQSDGVYGIFLHDPVSFVALVQPDLFTYKKGVVRVETQGICEGHTLMDQGLKRWNADNP 943
            HV+SDGVYGIFLHDPVSFVALV+PDLFTYK GVVRVETQGIC GHTLMDQGLKRWN+ NP
Sbjct: 264  HVKSDGVYGIFLHDPVSFVALVRPDLFTYKNGVVRVETQGICAGHTLMDQGLKRWNSSNP 323

Query: 944  WLGYSPVSVAWTVDVENVLTYIKKMLMK 1027
            W G+SPV+VAWTV V+ VL Y++++LMK
Sbjct: 324  WSGFSPVAVAWTVTVDEVLNYVRQLLMK 351


>ref|XP_002881439.1| inosine-uridine preferring nucleoside hydrolase family protein
            [Arabidopsis lyrata subsp. lyrata]
            gi|297327278|gb|EFH57698.1| inosine-uridine preferring
            nucleoside hydrolase family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 332

 Score =  508 bits (1307), Expect = e-141
 Identities = 246/318 (77%), Positives = 281/318 (88%)
 Frame = +2

Query: 77   KLEKVIIDTDPGIDDSMAILMAFQTPELEVLGLTTIFGNCTTKDATRNALLLCEIAGRAD 256
            K EK+IIDTDPGIDDSMAI+MAFQTPELE+LGLTT+FGN +T+DATRNALLLCEIAG  D
Sbjct: 16   KREKLIIDTDPGIDDSMAIMMAFQTPELEILGLTTVFGNVSTQDATRNALLLCEIAGFPD 75

Query: 257  VPVAEGSSEPLKGGEPRVADFVHGSDGLGNIXXXXXXXXXXXXXXAVEFLIDKISEFPGE 436
            VPVAEGSSEPLKGG PRVADFVHG +GLG++              A EFL +K+SE+PGE
Sbjct: 76   VPVAEGSSEPLKGGIPRVADFVHGKNGLGDVSLPPPSRKKCEKS-AAEFLDEKVSEYPGE 134

Query: 437  VSVLALGPLTNLALAIKSDSSFASKVKRIVVLGGSFFALGNVNPAAEANIYGDPEAADVV 616
            V++LALGPLTNLALAIK DSSFASKVK+IV+LGG+FF+LGNVNPAAEANIYGDPEAADVV
Sbjct: 135  VTILALGPLTNLALAIKRDSSFASKVKKIVILGGAFFSLGNVNPAAEANIYGDPEAADVV 194

Query: 617  FTCGANIDIVGINITTQVKLTDEDLSELRESKGRHAQFISDICKFYRDWHVQSDGVYGIF 796
            FT GA+I +VGINITTQ+KL+D+DL EL   KG+H++ ISD+CKFYRDWHV+SDGVYG++
Sbjct: 195  FTSGADITVVGINITTQLKLSDDDLLELSNCKGKHSKLISDMCKFYRDWHVKSDGVYGVY 254

Query: 797  LHDPVSFVALVQPDLFTYKKGVVRVETQGICEGHTLMDQGLKRWNADNPWLGYSPVSVAW 976
            LHDPVSFVA+V+PDLFTYKKGVVRVETQGIC GHTLMDQGLKRWN  NPW+GYSP+SVAW
Sbjct: 255  LHDPVSFVAVVRPDLFTYKKGVVRVETQGICVGHTLMDQGLKRWNGSNPWVGYSPISVAW 314

Query: 977  TVDVENVLTYIKKMLMKP 1030
            TVDVE VL Y+K  LMKP
Sbjct: 315  TVDVEGVLEYVKAKLMKP 332


>ref|NP_565843.1| Uridine nucleosidase 1 [Arabidopsis thaliana]
            gi|75206298|sp|Q9SJM7.2|URH1_ARATH RecName: Full=Uridine
            nucleosidase 1; AltName: Full=Uridine ribohydrolase 1
            gi|15809830|gb|AAL06843.1| At2g36310/F2H17.8 [Arabidopsis
            thaliana] gi|17978871|gb|AAL47407.1| At2g36310/F2H17.8
            [Arabidopsis thaliana] gi|20197937|gb|AAD21435.2|
            expressed protein [Arabidopsis thaliana]
            gi|21554564|gb|AAM63615.1| unknown [Arabidopsis thaliana]
            gi|330254137|gb|AEC09231.1| Uridine nucleosidase 1
            [Arabidopsis thaliana]
          Length = 336

 Score =  506 bits (1303), Expect = e-141
 Identities = 246/318 (77%), Positives = 280/318 (88%)
 Frame = +2

Query: 77   KLEKVIIDTDPGIDDSMAILMAFQTPELEVLGLTTIFGNCTTKDATRNALLLCEIAGRAD 256
            K EK+IIDTDPGIDDSMAILMAFQTPELE+LGLTT+FGN +T+DATRNALLLCEIAG  D
Sbjct: 20   KHEKLIIDTDPGIDDSMAILMAFQTPELEILGLTTVFGNVSTQDATRNALLLCEIAGFPD 79

Query: 257  VPVAEGSSEPLKGGEPRVADFVHGSDGLGNIXXXXXXXXXXXXXXAVEFLIDKISEFPGE 436
            VPVAEGSSEPLKGG PRVADFVHG +GLG++              A EFL +K+ E+PGE
Sbjct: 80   VPVAEGSSEPLKGGIPRVADFVHGKNGLGDVSLPPPSRKKSEKS-AAEFLDEKVEEYPGE 138

Query: 437  VSVLALGPLTNLALAIKSDSSFASKVKRIVVLGGSFFALGNVNPAAEANIYGDPEAADVV 616
            V++LALGPLTNLALAIK DSSFASKVK+IV+LGG+FF+LGNVNPAAEANIYGDPEAADVV
Sbjct: 139  VTILALGPLTNLALAIKRDSSFASKVKKIVILGGAFFSLGNVNPAAEANIYGDPEAADVV 198

Query: 617  FTCGANIDIVGINITTQVKLTDEDLSELRESKGRHAQFISDICKFYRDWHVQSDGVYGIF 796
            FT GA+I +VGINITTQ+KL+D+DL EL   KG+H++ ISD+CKFYRDWHV+SDGVYG++
Sbjct: 199  FTSGADITVVGINITTQLKLSDDDLLELGNCKGKHSKLISDMCKFYRDWHVKSDGVYGVY 258

Query: 797  LHDPVSFVALVQPDLFTYKKGVVRVETQGICEGHTLMDQGLKRWNADNPWLGYSPVSVAW 976
            LHDPVSFVA+V+PDLFTYKKGVVRVETQGIC GHTLMDQGLKRWN  NPW+GYSP+SVAW
Sbjct: 259  LHDPVSFVAVVRPDLFTYKKGVVRVETQGICVGHTLMDQGLKRWNGSNPWVGYSPISVAW 318

Query: 977  TVDVENVLTYIKKMLMKP 1030
            TVDVE VL Y+K  LMKP
Sbjct: 319  TVDVEGVLEYVKAKLMKP 336


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