BLASTX nr result

ID: Coptis23_contig00012206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012206
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282581.2| PREDICTED: protein unc-50 homolog [Vitis vin...   169   5e-40
gb|AFK46272.1| unknown [Medicago truncatula]                          165   7e-39
ref|XP_004136958.1| PREDICTED: protein unc-50 homolog [Cucumis s...   165   9e-39
ref|XP_003555962.1| PREDICTED: protein unc-50 homolog [Glycine max]   164   1e-38
gb|AAM61449.1| unknown [Arabidopsis thaliana]                         164   2e-38

>ref|XP_002282581.2| PREDICTED: protein unc-50 homolog [Vitis vinifera]
          Length = 251

 Score =  169 bits (428), Expect = 5e-40
 Identities = 81/105 (77%), Positives = 86/105 (81%)
 Frame = -2

Query: 703 VEWLYAFDVHCNSFFPMFVALYVIHYFLSPLLVAHGFIPVLLSNLLFMAAISYYHYLNFL 524
           VEWLYAFDVHCNSFFPMFV LYVIHYFLSPLLVAHGFIPVLLSNLLFM A SYYHYLNFL
Sbjct: 144 VEWLYAFDVHCNSFFPMFVLLYVIHYFLSPLLVAHGFIPVLLSNLLFMVATSYYHYLNFL 203

Query: 523 GYDVLPFLEKTTFFLYXXXXXXXXXXXXXXXXFNPTRYMMSIYFS 389
           GYDVLPFLE+TTFFLY                FNP+RY+M++YFS
Sbjct: 204 GYDVLPFLERTTFFLYPIGCVIILSPIFILSGFNPSRYIMNMYFS 248


>gb|AFK46272.1| unknown [Medicago truncatula]
          Length = 257

 Score =  165 bits (418), Expect = 7e-39
 Identities = 79/105 (75%), Positives = 83/105 (79%)
 Frame = -2

Query: 703 VEWLYAFDVHCNSFFPMFVALYVIHYFLSPLLVAHGFIPVLLSNLLFMAAISYYHYLNFL 524
           VEW+YAFDVHCNSFFPMFV LYVIHYFLSPLLVAHGFIP LLSNLLFM   SYYHYLNFL
Sbjct: 150 VEWMYAFDVHCNSFFPMFVLLYVIHYFLSPLLVAHGFIPELLSNLLFMVGASYYHYLNFL 209

Query: 523 GYDVLPFLEKTTFFLYXXXXXXXXXXXXXXXXFNPTRYMMSIYFS 389
           GYDVLPFLE+TTFFLY                FNP+RY M+IYFS
Sbjct: 210 GYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNIYFS 254


>ref|XP_004136958.1| PREDICTED: protein unc-50 homolog [Cucumis sativus]
           gi|449519876|ref|XP_004166960.1| PREDICTED: protein
           unc-50 homolog [Cucumis sativus]
          Length = 252

 Score =  165 bits (417), Expect = 9e-39
 Identities = 78/105 (74%), Positives = 84/105 (80%)
 Frame = -2

Query: 703 VEWLYAFDVHCNSFFPMFVALYVIHYFLSPLLVAHGFIPVLLSNLLFMAAISYYHYLNFL 524
           VEWLYAFDVHCNSFFPMFV LYVIHYF+SPLLVAHGFIP+LLSNLLFM   SYYHY+NFL
Sbjct: 145 VEWLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHGFIPLLLSNLLFMIGASYYHYVNFL 204

Query: 523 GYDVLPFLEKTTFFLYXXXXXXXXXXXXXXXXFNPTRYMMSIYFS 389
           GYDVLPFLEKTTFFLY                FNP+RY M++YFS
Sbjct: 205 GYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPSRYFMNMYFS 249


>ref|XP_003555962.1| PREDICTED: protein unc-50 homolog [Glycine max]
          Length = 258

 Score =  164 bits (416), Expect = 1e-38
 Identities = 78/105 (74%), Positives = 83/105 (79%)
 Frame = -2

Query: 703 VEWLYAFDVHCNSFFPMFVALYVIHYFLSPLLVAHGFIPVLLSNLLFMAAISYYHYLNFL 524
           VEW+YAFDVHCNSFFP FV LYVIHYFLSPLLVAHGFIPVLLSNLLFM   SYYHYLNFL
Sbjct: 151 VEWMYAFDVHCNSFFPFFVLLYVIHYFLSPLLVAHGFIPVLLSNLLFMVGASYYHYLNFL 210

Query: 523 GYDVLPFLEKTTFFLYXXXXXXXXXXXXXXXXFNPTRYMMSIYFS 389
           GYDVLPFLE+TTFFLY                FNP+RY M++YFS
Sbjct: 211 GYDVLPFLERTTFFLYPIGIVIVLSPILILSGFNPSRYFMNMYFS 255


>gb|AAM61449.1| unknown [Arabidopsis thaliana]
          Length = 252

 Score =  164 bits (414), Expect = 2e-38
 Identities = 76/105 (72%), Positives = 83/105 (79%)
 Frame = -2

Query: 703 VEWLYAFDVHCNSFFPMFVALYVIHYFLSPLLVAHGFIPVLLSNLLFMAAISYYHYLNFL 524
           VEWLY FDVHCNSFFPMFV LYV+HYFLSPLL+AHGFIP+LLSNLLFM   SYYHYLNFL
Sbjct: 145 VEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLFMVGASYYHYLNFL 204

Query: 523 GYDVLPFLEKTTFFLYXXXXXXXXXXXXXXXXFNPTRYMMSIYFS 389
           GYDVLPFLE+TTFFLY                FNP+RY M++YFS
Sbjct: 205 GYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNMYFS 249


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