BLASTX nr result

ID: Coptis23_contig00012201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012201
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614469.1| Helicase-like protein [Medicago truncatula] ...    65   4e-09
ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [S...    58   7e-07
ref|XP_002453068.1| hypothetical protein SORBIDRAFT_04g037770 [S...    58   7e-07
gb|ABF70031.1| DNA helicase homolog, putative [Musa acuminata]         58   7e-07
ref|XP_002449182.1| hypothetical protein SORBIDRAFT_05g006165 [S...    57   1e-06

>ref|XP_003614469.1| Helicase-like protein [Medicago truncatula]
           gi|355515804|gb|AES97427.1| Helicase-like protein
           [Medicago truncatula]
          Length = 377

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/47 (59%), Positives = 38/47 (80%)
 Frame = -3

Query: 192 QQYILDNYIKISTLRLRWVRDHQQEIRAELYQGLQDSLNSGELHSGM 52
           QQY++DNY+KI T RLRW+R +Q  IR+ELYQGLQD+L  GE ++ +
Sbjct: 298 QQYVVDNYVKIETRRLRWMRRNQNNIRSELYQGLQDALYDGETNASV 344


>ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [Sorghum bicolor]
           gi|241937278|gb|EES10423.1| hypothetical protein
           SORBIDRAFT_06g001660 [Sorghum bicolor]
          Length = 1484

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = -3

Query: 192 QQYILDNYIKISTLRLRWVRDHQQEIRAELYQGLQDSLNSGE 67
           QQ+ +D YIKI + RL ++R+HQ EIRA+LYQGL DSL++GE
Sbjct: 407 QQFAVDTYIKIESSRLDYIRNHQTEIRADLYQGLVDSLHAGE 448


>ref|XP_002453068.1| hypothetical protein SORBIDRAFT_04g037770 [Sorghum bicolor]
           gi|241932899|gb|EES06044.1| hypothetical protein
           SORBIDRAFT_04g037770 [Sorghum bicolor]
          Length = 1275

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = -3

Query: 192 QQYILDNYIKISTLRLRWVRDHQQEIRAELYQGLQDSLNSGE 67
           QQ+ +D YIKI + RL ++R+HQ EIRA+LYQGL DSL++GE
Sbjct: 605 QQFAVDTYIKIESSRLDYIRNHQTEIRADLYQGLVDSLHAGE 646


>gb|ABF70031.1| DNA helicase homolog, putative [Musa acuminata]
          Length = 1605

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = -3

Query: 192 QQYILDNYIKISTLRLRWVRDHQQEIRAELYQGLQDSLNSGE 67
           QQ+ +D YIKI + RL ++R+HQ EIRA+LYQGL DSL++GE
Sbjct: 530 QQFAVDTYIKIESSRLDYIRNHQTEIRADLYQGLVDSLHAGE 571


>ref|XP_002449182.1| hypothetical protein SORBIDRAFT_05g006165 [Sorghum bicolor]
           gi|241935025|gb|EES08170.1| hypothetical protein
           SORBIDRAFT_05g006165 [Sorghum bicolor]
          Length = 1388

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/42 (59%), Positives = 35/42 (83%)
 Frame = -3

Query: 192 QQYILDNYIKISTLRLRWVRDHQQEIRAELYQGLQDSLNSGE 67
           QQ+ +D YIKI + RL ++R+HQ +IRA+LYQGL DSL++GE
Sbjct: 456 QQFAVDTYIKIESSRLDYIRNHQDDIRADLYQGLVDSLHAGE 497


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