BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012197
         (3339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]  1396   0.0  
ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223...  1345   0.0  
ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sati...  1326   0.0  
ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max]     1302   0.0  
ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana] ...  1283   0.0  

>ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]
          Length = 1379

 Score = 1396 bits (3614), Expect = 0.0
 Identities = 722/1053 (68%), Positives = 829/1053 (78%), Gaps = 42/1053 (3%)
 Frame = -3

Query: 3040 LQPSAFQPETPESIKKHWEEKYLLPELDKDEFSVEKSGRQWDFDWFDMAKVHLEPTLPRT 2861
            + P AF  ETPE+IK++ E+ YLLP LD DEFS EK GRQWDFDWFD AKV LEP+LPR+
Sbjct: 44   ISPPAFARETPETIKEYIEDTYLLPRLDPDEFSPEKVGRQWDFDWFDRAKVPLEPSLPRS 103

Query: 2860 VIVPEYELPFKRPKD------WEPRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIG 2699
            V+V ++ELPF+R K       WEP S E++VS+LM GA ++G  PRM GPAKDF+RGSI 
Sbjct: 104  VVVQKWELPFRRSKKESASGKWEPISEEVEVSDLMVGAQDTGPLPRMVGPAKDFIRGSIN 163

Query: 2698 NRPFRPGGLDVSQSAQKVVPEGARSGQWVREILDGGPAQGIPPGFKHGLDLGDLMAHPYS 2519
            NRPFRPGGLD SQS  ++ P GA +G+WV+E+L+GGPA  +PP FK GLDLGDL A+ +S
Sbjct: 164  NRPFRPGGLDDSQSLDRIPPLGASNGEWVQEVLNGGPALVVPPSFKQGLDLGDLKAYSHS 223

Query: 2518 WKVYKDQSEVKSSSDDKLSRISVQFDDLFAKAWEDDIIEESQ------------------ 2393
            WKVYK QS +K  S++ L+++S+QFDDL  KAWE+D + ES+                  
Sbjct: 224  WKVYKGQSALKGKSEENLNKLSIQFDDLLKKAWEEDDVAESKEDGIICTFYILALGTNVC 283

Query: 2392 ----------HRDDAESAKAGIEMEEEGNIPRNVSDTELKKEADLCSSAHDTESLVLDEI 2243
                      H  +++S K  ++++E                 +  S+  D ES VLDEI
Sbjct: 284  KVTDSWAKSCHSPESDSIKLEVQLDE----------------VEASSNVGDLESSVLDEI 327

Query: 2242 LSTDTGRSILGSNEISVPGGPQKKEAWAIASGSESIADRFCELVPDMALEFPFELDTFQK 2063
            LS ++G S  G +  S  GG QKKEAWA++ G+E IAD F ELVPDMAL+FPFELDTFQK
Sbjct: 328  LSVESG-SKPGLDGTSDDGGRQKKEAWAVSGGNEGIADHFHELVPDMALDFPFELDTFQK 386

Query: 2062 EAIYYLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFCGK 1883
            EAIYYLEKG+SVFVAAHTSAGKTVVAEYAFALA+KHCTRAVYTAPIKTISNQKYRDFCGK
Sbjct: 387  EAIYYLEKGDSVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRDFCGK 446

Query: 1882 FDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVW 1703
            FDVGLLTGDVSLRPEASCLIMTTEILRSMLY+GADIIRDIEWVIFDEVHYVNDVERGVVW
Sbjct: 447  FDVGLLTGDVSLRPEASCLIMTTEILRSMLYKGADIIRDIEWVIFDEVHYVNDVERGVVW 506

Query: 1702 EEVIIMLPRHVNIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCVFYSGEL 1523
            EEVIIMLPRH+NIVLLSATVPNT+EFADWIGRTKQK+IRVTGTTKRPVPLEHC+FYSGEL
Sbjct: 507  EEVIIMLPRHINIVLLSATVPNTIEFADWIGRTKQKQIRVTGTTKRPVPLEHCIFYSGEL 566

Query: 1522 YTICESESFQPQGLKTAKDAYKKKNXXXXXXXXXTL--PASVAPHGGAPVRQQRENFNRG 1349
            Y ICESE+F PQGLKTAKD +KKKN         T   P S A H GA   Q+REN  RG
Sbjct: 567  YKICESETFLPQGLKTAKDVHKKKNLSTGGGGSGTYSGPPSAA-HDGARA-QRRENPGRG 624

Query: 1348 KQQKHSGTQNAGQFSGTAGPN------QSTWGARKSEASLWMQLINKLSKKSLLPVIIFC 1187
            KQ K+SG+Q  G F GT G N      QS WG+R+SEASLW+ LINKLSKKSLLPV+IFC
Sbjct: 625  KQNKYSGSQKVGNFYGTGGGNQNSSGSQSNWGSRRSEASLWLLLINKLSKKSLLPVVIFC 684

Query: 1186 FSKNRCDKSADNMTTTDLTSSSEKSQIRVFCDKAFSRLKGSDRNLPQVVRVQNLLLRGIG 1007
            FSKNRCD SAD MT  DLTSSSEK +I VFC++AFSRLKGSDRNLPQV+RVQ+LL RGIG
Sbjct: 685  FSKNRCDISADKMTGIDLTSSSEKHEIHVFCERAFSRLKGSDRNLPQVIRVQSLLRRGIG 744

Query: 1006 VHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKFDGKEFRQLL 827
            VHHAGLLPIVKEVVEMLFCRGV+KVLFSTETFAMGVNAPARTVVFD+LRKFDG+EFRQLL
Sbjct: 745  VHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDSLRKFDGREFRQLL 804

Query: 826  PGEYTQMAGRAGRRGLDKIGTVVIMCRDEIPEERDLKHVIVGSAIRLESQFRLTYIMILH 647
            PGEYTQMAGRAGRRGLDKIGTVV+MCRDEIP+ERDLKHVIVGSA RL SQFRLTYIMILH
Sbjct: 805  PGEYTQMAGRAGRRGLDKIGTVVVMCRDEIPDERDLKHVIVGSATRLASQFRLTYIMILH 864

Query: 646  LLRVEELKVEDMLKRSFAEFHXXXXXXXXXXXXXXXXXXPMTVIECIKGEPAIEEYFEML 467
            LLRVEELKVEDMLKRSFAEFH                  P   IECIKGEP IEEY++M 
Sbjct: 865  LLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMRKLAQPTKTIECIKGEPTIEEYYDMY 924

Query: 466  TEADRHREFVLEKIIQSSVSQQFLSPGRVVVVKSQSAEDHLLGVVLKIPSASFKQYIILV 287
            TEA++H   +LE ++QSS +QQFL+ GRVVVVKSQS +DHL+GVV+K PSAS KQYI+LV
Sbjct: 925  TEAEQHSNQILETVMQSSAAQQFLTLGRVVVVKSQSVQDHLIGVVVKAPSASSKQYIVLV 984

Query: 286  LRPDLPSTFQNSSPTEIPQEKGSGNEQQGYFIAPKSKRGLDDDYFSSVTSRKGSGVVNIK 107
            L+P LPST Q  S +   Q+K SG   +G+FI PK+KR L+DDY++S TSRK SG +NIK
Sbjct: 985  LKPHLPSTLQTPSESGNLQDKKSGAFPEGHFILPKAKRALEDDYYTSTTSRKASGTINIK 1044

Query: 106  LPHRGSAAGMSFEVIGIEPVEFLSICKCKIKID 8
            LP+ G+AAG+S+EV GI+  EFL IC  KIKID
Sbjct: 1045 LPYHGAAAGVSYEVRGIDNKEFLCICIHKIKID 1077


>ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223540281|gb|EEF41852.1|
            helicase, putative [Ricinus communis]
          Length = 1335

 Score = 1345 bits (3480), Expect = 0.0
 Identities = 702/1022 (68%), Positives = 808/1022 (79%), Gaps = 12/1022 (1%)
 Frame = -3

Query: 3034 PSAFQPETPESIKKHWEEKYLLPELDKDEFSVEKSGRQWDFDWFDMAKVHLEPTLPRTVI 2855
            P AF  ET ESIK++ EE+YLLP LD D FS E +GRQWDFDWF+ A V L P+LPR V+
Sbjct: 47   PPAFPRETRESIKEYIEEEYLLPRLDSDVFSPENAGRQWDFDWFEKANVLLNPSLPRAVV 106

Query: 2854 VPEYELPFKRPKD------WEPRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIGNR 2693
            VP +E PF+R K       WEP+S++MDVSEL+  A +S S PR+ GPAKDFVRGSI NR
Sbjct: 107  VPTWESPFRRQKSTSEQGIWEPKSVQMDVSELI--AQDSSSLPRIAGPAKDFVRGSINNR 164

Query: 2692 PFRPGGLDVSQSAQKVVPEGARSGQWVREILDGGPAQGIPPGFKHGLDLGDLMAHPYSWK 2513
            PFRPGGLD SQS +K++P GA +G+W+RE+L+GGPAQ IPP  K GLDLGDL A+P SW 
Sbjct: 165  PFRPGGLDDSQSLEKILPAGAANGEWLREVLNGGPAQSIPPSLKKGLDLGDLKAYPSSWN 224

Query: 2512 VYKDQSEVKSSSDDKLSRISVQFDDLFAKAWEDDIIEESQHRDDAESAKAGIEMEEEGNI 2333
            VYKDQS   ++S +KL  +     D + K+  D + E    +D++               
Sbjct: 225  VYKDQSPSDTASREKL--VCHSSKDEYLKSDVDVVPEVHLLKDESRK------------- 269

Query: 2332 PRNVSDTELKKEADLCSSAHDTESLVLDEILSTDTGRSILGSNEISVPGGPQKKEAWAIA 2153
                SD+E  K  D+  S  +TE  VLDEILS D+G     S+     GG ++K+ WA++
Sbjct: 270  ----SDSEESK-IDIQGSVFETEVSVLDEILSVDSGGLTSRSDGTGDGGGHKEKKGWALS 324

Query: 2152 SGSESIADRFCELVPDMALEFPFELDTFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAF 1973
              SE IA+ F +L+PD AL+FPFELDTFQKEAIYYLEKG+SVFVAAHTSAGKTVVAEYAF
Sbjct: 325  GNSEWIAEHFYQLLPDTALDFPFELDTFQKEAIYYLEKGDSVFVAAHTSAGKTVVAEYAF 384

Query: 1972 ALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSML 1793
            ALA+KHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEA+CLIMTTEILRSML
Sbjct: 385  ALASKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEANCLIMTTEILRSML 444

Query: 1792 YRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHVNIVLLSATVPNTVEFADWI 1613
            YRGADIIRDIEWVIFDEVHYVND ERGVVWEEVIIMLPRHVNIVLLSATVPNTVEFADWI
Sbjct: 445  YRGADIIRDIEWVIFDEVHYVNDAERGVVWEEVIIMLPRHVNIVLLSATVPNTVEFADWI 504

Query: 1612 GRTKQKKIRVTGTTKRPVPLEHCVFYSGELYTICESESFQPQGLKTAKDAYKKKNXXXXX 1433
            GRTKQKKI+VTGTTKRPVPLEHC+FYSGELY ICE+E+F PQGL+ AKDA+KKKN     
Sbjct: 505  GRTKQKKIQVTGTTKRPVPLEHCLFYSGELYKICENETFIPQGLRVAKDAHKKKNTSAVS 564

Query: 1432 XXXXTLPASVAPHGGAPVRQQRENFNRGKQQKHSGTQNAGQFSGTA------GPNQSTWG 1271
                    S+A   GA   ++RE  NR KQ KH G+QNAG FSGT+      G  Q+ WG
Sbjct: 565  ------SGSLALRDGAH-GKKREYLNRNKQNKHFGSQNAGSFSGTSWGNQNNGNGQNNWG 617

Query: 1270 ARKSEASLWMQLINKLSKKSLLPVIIFCFSKNRCDKSADNMTTTDLTSSSEKSQIRVFCD 1091
            +R+SEASLW+QL+NKLSKKSLLPV+IFCFSKNRCDKSAD M+ TDLTSSSEKS+IRVFCD
Sbjct: 618  SRRSEASLWLQLVNKLSKKSLLPVVIFCFSKNRCDKSADGMSGTDLTSSSEKSEIRVFCD 677

Query: 1090 KAFSRLKGSDRNLPQVVRVQNLLLRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETF 911
            KAFSRLKGSDRNLPQ+VRVQ+LL RGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETF
Sbjct: 678  KAFSRLKGSDRNLPQIVRVQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETF 737

Query: 910  AMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVVIMCRDEIPE 731
            AMGVNAPARTVVFD LRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTV++MCRDEIP+
Sbjct: 738  AMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVIVMCRDEIPD 797

Query: 730  ERDLKHVIVGSAIRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHXXXXXXXXXXX 551
            ERDLKHVIVGSA RLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFH           
Sbjct: 798  ERDLKHVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHTQKKLPETQQV 857

Query: 550  XXXXXXXPMTVIECIKGEPAIEEYFEMLTEADRHREFVLEKIIQSSVSQQFLSPGRVVVV 371
                   P   IECIKGEP IEEY++M  EA+ +   + E ++QSS +QQFL+PGRVVVV
Sbjct: 858  LMRKLAQPTKAIECIKGEPDIEEYYDMFLEAEEYSNQISEAVMQSSAAQQFLTPGRVVVV 917

Query: 370  KSQSAEDHLLGVVLKIPSASFKQYIILVLRPDLPSTFQNSSPTEIPQEKGSGNEQQGYFI 191
            KSQS +DHLLGVV+K PS S KQYI+LVL+PDLPS+ Q S+     Q+K SG+  + Y +
Sbjct: 918  KSQSGQDHLLGVVVKGPSTSMKQYIVLVLKPDLPSSTQISN----LQDKKSGDIPKAYLL 973

Query: 190  APKSKRGLDDDYFSSVTSRKGSGVVNIKLPHRGSAAGMSFEVIGIEPVEFLSICKCKIKI 11
             PKSKRG +++YF S  SRKGSG VNIKLP++G+AAG+++EV G++  EFL IC  K+KI
Sbjct: 974  MPKSKRG-EEEYFYSTASRKGSGAVNIKLPYQGTAAGVNYEVRGMDNTEFLCICARKLKI 1032

Query: 10   DQ 5
            DQ
Sbjct: 1033 DQ 1034


>ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sativus]
          Length = 1352

 Score = 1326 bits (3432), Expect = 0.0
 Identities = 696/1035 (67%), Positives = 807/1035 (77%), Gaps = 24/1035 (2%)
 Frame = -3

Query: 3034 PSAFQPETPESIKKHWEEKYLLPELDKDEFSVEKSGRQWDFDWFDMAKVHLEPTLPRTVI 2855
            P AF  ETPE+IK + EE YL P LD DEFS EK GRQWDFDWF+MAKV L+P+ PR+V+
Sbjct: 46   PPAFPKETPETIKNYIEETYLQPRLDPDEFSPEKVGRQWDFDWFEMAKVSLDPSPPRSVV 105

Query: 2854 VPEYELPFKRPKD-------WEPRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIGN 2696
            VP + LPF+RPK        WEP S ++DVSEL     ESGS PR+PGPAKDFVRGSI N
Sbjct: 106  VPTWVLPFERPKKDGAAGGTWEPDSRQVDVSELNVETQESGSQPRVPGPAKDFVRGSINN 165

Query: 2695 RPFRPGGLDVSQSAQKVVPEGARSGQWVREILDGGPAQGIPPGFKHGLDLGDLMAHPYSW 2516
            RPFRPGGLD SQS  +++P+ A +G+WV E+L+GGPAQ IPP  K GLDLGDL  +P SW
Sbjct: 166  RPFRPGGLDDSQSIDRILPDAASNGEWVHEVLNGGPAQFIPPILKKGLDLGDLKEYPNSW 225

Query: 2515 KVYKDQSE--VKSSSDDKLSRISVQFDDLFAKAWEDDIIEESQHRDDAESAKAGIEMEEE 2342
             VY++QS    K+S  + LS +SVQFDDLF KAWE+D IE         S + G+     
Sbjct: 226  NVYENQSSSSFKTSPIENLSELSVQFDDLFKKAWEEDAIE---------SVEDGVY---S 273

Query: 2341 GNIPR--NVSDTELKKEADLCSSAHDTESLVLDEILSTDTGRSILGSNEISVPGGPQKKE 2168
            G  P+  ++   +  +E +  S A       LDEILS ++G   L S++ +  G  QKKE
Sbjct: 274  GQSPKAESIKSEDRVRELEAISIAPAPGISALDEILSLESGGFSLSSDQATEVGA-QKKE 332

Query: 2167 AWAIASGSESIADRFCELVPDMALEFPFELDTFQKEAIYYLEKGESVFVAAHTSAGKTVV 1988
            AW +  G E I+ RF +LVPDMAL+FPFELDTFQKEAIY+LEKG+SVFVAAHTSAGKTVV
Sbjct: 333  AWVVVGGREDISLRFHDLVPDMALDFPFELDTFQKEAIYHLEKGDSVFVAAHTSAGKTVV 392

Query: 1987 AEYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEI 1808
            AEYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEI
Sbjct: 393  AEYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEI 452

Query: 1807 LRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHVNIVLLSATVPNTVE 1628
            LRSMLYRGADIIRDIEWVIFDEVHYVND+ERGVVWEEVIIMLPRH+NIVLLSATVPNT+E
Sbjct: 453  LRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTIE 512

Query: 1627 FADWIGRTKQKKIRVTGTTKRPVPLEHCVFYSGELYTICESESFQPQGLKTAKDAYKKKN 1448
            FADWIGRTKQK+I VTGT KRPVPLEHC+FYSGELY ICESE F   GLK AKDA KKKN
Sbjct: 513  FADWIGRTKQKRIHVTGTAKRPVPLEHCIFYSGELYKICESEIFLSHGLKAAKDASKKKN 572

Query: 1447 XXXXXXXXXTLPASVAPHGGAPV------RQQRENFNRGKQQKHSGTQNAGQFSGTAGPN 1286
                      +  +   H GA V       ++ E+FNR KQ KHSG+QN G FSGT+  N
Sbjct: 573  -------SSVVGGAGGSHAGASVANDGTKNRKVESFNRSKQNKHSGSQNLGNFSGTSWGN 625

Query: 1285 Q------STWGARKSEASLWMQLINKLSKKSLLPVIIFCFSKNRCDKSADNMTTTDLTSS 1124
            Q      + WG+R+S+ASLW+ LIN+LSKKSLLPV+IFCFSKNRCDKSADN+ + DLTSS
Sbjct: 626  QKNGDGHNNWGSRRSDASLWLLLINRLSKKSLLPVVIFCFSKNRCDKSADNIYSIDLTSS 685

Query: 1123 SEKSQIRVFCDKAFSRLKGSDRNLPQVVRVQNLLLRGIGVHHAGLLPIVKEVVEMLFCRG 944
            SEKS+IRVFCDKAFSRLKGSDR+LPQ+VRVQ LL RGIGVHHAGLLPIVKEVVEMLFCRG
Sbjct: 686  SEKSEIRVFCDKAFSRLKGSDRSLPQIVRVQGLLRRGIGVHHAGLLPIVKEVVEMLFCRG 745

Query: 943  VIKVLFSTETFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGT 764
            VIKVLFSTETFAMGVNAPARTVVFD LRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGT
Sbjct: 746  VIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGT 805

Query: 763  VVIMCRDEIPEERDLKHVIVGSAIRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFH 584
            V++MCR+EIPEE+DLK VIVG+A +LESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFH
Sbjct: 806  VIVMCREEIPEEKDLKRVIVGTATKLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFH 865

Query: 583  XXXXXXXXXXXXXXXXXXPMTVIECIKGEPAIEEYFEMLTEADRHREFVLEKIIQSSVSQ 404
                              P   IECIKGE  IEEY+++  EA++    + E ++QSS  Q
Sbjct: 866  AQKKLPEKQQLLMRKLAQPTRTIECIKGEATIEEYYDLYAEAEKPSNQLSEAVMQSSAIQ 925

Query: 403  QFLSPGRVVVVKSQSAEDHLLGVVLKIPSASFKQYIILVLRPD-LPSTFQNSSPTEIPQE 227
            QFL PGRVV+VKSQSA+DHLLGV++K  +   +QYI+LVL PD LP+  Q+SS +++  E
Sbjct: 926  QFLVPGRVVIVKSQSAKDHLLGVIVK--ANMNRQYIVLVLMPDSLPT--QSSSSSDL--E 979

Query: 226  KGSGNEQQGYFIAPKSKRGLDDDYFSSVTSRKGSGVVNIKLPHRGSAAGMSFEVIGIEPV 47
            K   +  QGYF+ PKSKRGL++DY+S  T RKGSG+VNI+LPH G+A G+S+EV G++  
Sbjct: 980  KKKQDLTQGYFMVPKSKRGLENDYYSPST-RKGSGLVNIRLPHAGAAVGISYEVRGVDAK 1038

Query: 46   EFLSICKCKIKIDQG 2
            +FL +C  KIK+D G
Sbjct: 1039 DFLCVCTKKIKLDSG 1053


>ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max]
          Length = 1342

 Score = 1302 bits (3369), Expect = 0.0
 Identities = 686/1022 (67%), Positives = 788/1022 (77%), Gaps = 10/1022 (0%)
 Frame = -3

Query: 3040 LQPSAFQPETPESIKKHWEEKYLLPELDKDEFSVEKSGRQWDFDWFDMAKVHLEPTLPRT 2861
            + P AF  ETPESIKK+ EE YL P LD D+FS EK GRQW+FDWFD AKV LEP+LPRT
Sbjct: 44   IPPPAFPSETPESIKKYIEETYLQPRLDPDDFSPEKVGRQWEFDWFDRAKVPLEPSLPRT 103

Query: 2860 VIVPEYELPFKRPKD------WEPRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIG 2699
            ++VP +E PF+R  +      WEP+  E+DV++L  GA ESG  PR  G  KDFVRGSI 
Sbjct: 104  MVVPVWEPPFRRSNNGSVKGIWEPKFEEVDVADLTSGAVESGPLPRTSG--KDFVRGSIN 161

Query: 2698 NRPFRPGGLDVSQSAQKVVPEGARSGQWVREILDGGPAQGIPPGFKHGLDLGDLMAHPYS 2519
            NRPFRPGGLD S+S  +++PEGA +G+WV EIL+GGPAQ IPP  K GLD G L  +P S
Sbjct: 162  NRPFRPGGLDDSRSLDRILPEGASNGEWVHEILNGGPAQTIPPSLKQGLDFGMLKPYPCS 221

Query: 2518 WKVYKDQSEVKSSSDDKLSRISVQFDDLFAKAWEDDII--EESQHRDDAESAKAGIEMEE 2345
            W V K+ + +KSSSD+KLS +SVQFDDLF KAW++D +  +E  H  + E+    I +E 
Sbjct: 222  WNVCKEANSLKSSSDEKLSGLSVQFDDLFKKAWDEDAVGDQEDGHLSEVET----ITLEA 277

Query: 2344 EGNIPRNVSDTELKKEADLCSSAHDTESLVLDEILSTDTGRSILGSNEISVPGGPQKKEA 2165
            E      V  TE+       S AH++E + LD+ILS D+  S L  +  +   G QKKEA
Sbjct: 278  E------VGTTEVS------SRAHESE-MSLDDILSADSEGSKLHLDGFNDEIGQQKKEA 324

Query: 2164 WAIASGSESIADRFCELVPDMALEFPFELDTFQKEAIYYLEKGESVFVAAHTSAGKTVVA 1985
            WAI   SE I D F ELVPDMALEFPFELD FQKEAIYYLEKGESVFVAAHTSAGKTVVA
Sbjct: 325  WAIHETSEQIVDSFHELVPDMALEFPFELDAFQKEAIYYLEKGESVFVAAHTSAGKTVVA 384

Query: 1984 EYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEIL 1805
            EYAFALA+KHCTRAVYTAPIKTISNQKYRD CGKFDVGLLTGDVSLRPEASCLIMTTEIL
Sbjct: 385  EYAFALASKHCTRAVYTAPIKTISNQKYRDLCGKFDVGLLTGDVSLRPEASCLIMTTEIL 444

Query: 1804 RSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHVNIVLLSATVPNTVEF 1625
            RSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRH+NIVLLSATVPNT+EF
Sbjct: 445  RSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINIVLLSATVPNTIEF 504

Query: 1624 ADWIGRTKQKKIRVTGTTKRPVPLEHCVFYSGELYTICESESFQPQGLKTAKDAYKKKNX 1445
            ADWIGRTKQK+IRVTGTTKRPVPLEHC+FYSGELY ICESE F PQGLK AK    +K  
Sbjct: 505  ADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELYKICESEKFLPQGLKAAKKEASRKKN 564

Query: 1444 XXXXXXXXTLPASVAPHGGAPVRQQRENFNRGKQQKHSGTQNAGQFSG--TAGPNQSTWG 1271
                      P     H  A V Q+REN +     KH G    G   G    G  QS W 
Sbjct: 565  LTAGGGSGPKPGISPGHDKARV-QKRENTS---HTKHHGANFYGTGRGYQNNGNGQSNWE 620

Query: 1270 ARKSEASLWMQLINKLSKKSLLPVIIFCFSKNRCDKSADNMTTTDLTSSSEKSQIRVFCD 1091
             R+++AS+ + LINKLSKKSLLPV+IFCFSKNRCDKSAD++T TDLTSSSEKS+IR+FCD
Sbjct: 621  LRRADASMLLMLINKLSKKSLLPVVIFCFSKNRCDKSADSLTGTDLTSSSEKSEIRLFCD 680

Query: 1090 KAFSRLKGSDRNLPQVVRVQNLLLRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETF 911
            KAFSRLKGSD+NLPQVVRVQNLL RGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETF
Sbjct: 681  KAFSRLKGSDKNLPQVVRVQNLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETF 740

Query: 910  AMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVVIMCRDEIPE 731
            AMGVNAPARTVVFD LRKFDGKEFRQLL GEYTQMAGRAGRRGLDKIGTV++MCRDE+PE
Sbjct: 741  AMGVNAPARTVVFDTLRKFDGKEFRQLLAGEYTQMAGRAGRRGLDKIGTVILMCRDELPE 800

Query: 730  ERDLKHVIVGSAIRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHXXXXXXXXXXX 551
            E DL+ VIVGSA RLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFH           
Sbjct: 801  ESDLEPVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEMQQL 860

Query: 550  XXXXXXXPMTVIECIKGEPAIEEYFEMLTEADRHREFVLEKIIQSSVSQQFLSPGRVVVV 371
                   P   IEC+KGEP IEEY+++  EA+ +   + E I+QS  +QQFL+ GRVV+V
Sbjct: 861  LKRKLNQPTKAIECLKGEPTIEEYYDLYLEAETYSNQISEAILQSPSAQQFLNTGRVVIV 920

Query: 370  KSQSAEDHLLGVVLKIPSASFKQYIILVLRPDLPSTFQNSSPTEIPQEKGSGNEQQGYFI 191
            KS+SA+DHLLGVV++ PS + K YI+ V++PD+PS+  N+S +   Q K SG   QGYF+
Sbjct: 921  KSESAQDHLLGVVVETPSPTNKMYIVFVIKPDMPSSVDNASSSGNMQNK-SGAFDQGYFV 979

Query: 190  APKSKRGLDDDYFSSVTSRKGSGVVNIKLPHRGSAAGMSFEVIGIEPVEFLSICKCKIKI 11
             PKS+R + D+Y +SV++RKG GV+ I+LP+ GSA GM +EV  ++  EFL IC  KIKI
Sbjct: 980  MPKSRRVVVDEYSTSVSARKGKGVITIRLPYSGSACGMGYEVREVDSKEFLCICSSKIKI 1039

Query: 10   DQ 5
            D+
Sbjct: 1040 DR 1041


>ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana]
            gi|332644703|gb|AEE78224.1| antiviral helicase SKI2
            [Arabidopsis thaliana]
          Length = 1347

 Score = 1283 bits (3320), Expect = 0.0
 Identities = 665/1024 (64%), Positives = 786/1024 (76%), Gaps = 12/1024 (1%)
 Frame = -3

Query: 3040 LQPSAFQPETPESIKKHWEEKYLLPELDKDEFSVEKSGRQWDFDWFDMAKVHLEPTLPRT 2861
            + P AF  ET ESIKKH EEKYL+P L+ D+FS EK+  QWDFDWF   K+ L+P+LPR+
Sbjct: 44   VSPPAFAKETKESIKKHIEEKYLIPRLEPDQFSAEKAENQWDFDWFSRVKMPLQPSLPRS 103

Query: 2860 VIVPEYELPFKRPKD------WEPRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIG 2699
            V+VP +ELPF+R K+      WEP+S+E+D+SE M G  +SG  PRM GP KDF+RGS+ 
Sbjct: 104  VVVPTWELPFRRQKEDTENGAWEPKSVEVDLSEQMYGDQDSGFFPRMVGPPKDFLRGSVN 163

Query: 2698 NRPFRPGGLDVSQSAQKVVPEGARSGQWVREILDGGPAQGIPPGFKHGLDLGDLMAHPYS 2519
            NRPFRPGGL+ SQS+++V+PEG  SGQWV+E+L+GGPAQ +PP FK  LDLGDLM +P +
Sbjct: 164  NRPFRPGGLEDSQSSERVLPEGVSSGQWVQELLNGGPAQTVPPSFKQSLDLGDLMPYPQT 223

Query: 2518 WKVYKDQSEVKSSSDDKLSRISVQFDDLFAKAWEDDIIEESQ---HRDDAESAKAGIEME 2348
            W VY+D S   ++SD+  S++S+QFDDLF KAWE+D   E +   H   +ES KA  E +
Sbjct: 224  WSVYEDHSSHGNASDENSSKLSIQFDDLFKKAWEEDTFSELEGDDHTAGSESPKAEAEPD 283

Query: 2347 EEGNIPRNVSDTELKKEADLCSSAHDTESLVLDEILSTDTGRSILGSNEISVPGGPQK-- 2174
             + +I   VS               +T+  VLDEILS+   ++ + S E +V G   K  
Sbjct: 284  AKASISNEVS------------KGLETDVTVLDEILSS--AKTAIMSEE-AVTGSSDKQL 328

Query: 2173 -KEAWAIASGSESIADRFCELVPDMALEFPFELDTFQKEAIYYLEKGESVFVAAHTSAGK 1997
             KE WA    S+ IADRF ELVPDMA+EFPFELD FQKEAI  LEKGESVFVAAHTSAGK
Sbjct: 329  RKEGWATKGDSQDIADRFYELVPDMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGK 388

Query: 1996 TVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMT 1817
            TVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVS+RPEASCLIMT
Sbjct: 389  TVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSIRPEASCLIMT 448

Query: 1816 TEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHVNIVLLSATVPN 1637
            TEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRH+N VLLSATVPN
Sbjct: 449  TEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPN 508

Query: 1636 TVEFADWIGRTKQKKIRVTGTTKRPVPLEHCVFYSGELYTICESESFQPQGLKTAKDAYK 1457
            T EFADWIGRTKQK+IRVTGTTKRPVPLEHC+FYSGELY +CE+E F  +G+K AKD+ K
Sbjct: 509  TFEFADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELYKVCENEVFLSKGIKDAKDSQK 568

Query: 1456 KKNXXXXXXXXXTLPASVAPHGGAPVRQQRENFNRGKQQKHSGTQNAGQFSGTAGPNQST 1277
            KKN             S A   G+   Q+ E  +RGKQ KHS  ++ G+ S  +G +Q+ 
Sbjct: 569  KKNSNAVSVAPKQQMGSSAHQDGSK-SQKHEAHSRGKQNKHSSVKDVGK-SSYSGNSQNN 626

Query: 1276 WGARKSEASLWMQLINKLSKKSLLPVIIFCFSKNRCDKSADNMTTTDLTSSSEKSQIRVF 1097
               R+S AS W+ LINKLSK SLLPV++FCFSKN CD+ AD +T TDLTSSSEKS+IRVF
Sbjct: 627  GAFRRSAASNWLLLINKLSKMSLLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRVF 686

Query: 1096 CDKAFSRLKGSDRNLPQVVRVQNLLLRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTE 917
            CDKAFSRLKGSDRNLPQV+R+Q+LL RGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTE
Sbjct: 687  CDKAFSRLKGSDRNLPQVLRLQSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTE 746

Query: 916  TFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVVIMCRDEI 737
            TFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDK GTVV+MCRDE+
Sbjct: 747  TFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEV 806

Query: 736  PEERDLKHVIVGSAIRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHXXXXXXXXX 557
            P+E DL+ VIVGSA RLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFH         
Sbjct: 807  PDESDLRRVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQ 866

Query: 556  XXXXXXXXXPMTVIECIKGEPAIEEYFEMLTEADRHREFVLEKIIQSSVSQQFLSPGRVV 377
                     P   IECIKGEPAIE+Y++M  EA+ +   + E ++QS  +Q FL  GRVV
Sbjct: 867  QLLMIKRSLPTKHIECIKGEPAIEDYYDMYMEANEYNNKMSEAVMQSPYAQSFLVQGRVV 926

Query: 376  VVKSQSAEDHLLGVVLKIPSASFKQYIILVLRPDLPSTFQNSSPTEIPQEKGSGNEQQGY 197
            V+KS    D+LLG+VLK PS + +QY++LV++ ++P   +N     +   K S +  QGY
Sbjct: 927  VMKSGMGIDNLLGIVLKGPSNTNRQYVVLVIKSEIPPPEKNM----VSIGKKSSDPSQGY 982

Query: 196  FIAPKSKRGLDDDYFSSVTSRKGSGVVNIKLPHRGSAAGMSFEVIGIEPVEFLSICKCKI 17
            FIAPKSKRG ++++++  +SRKG  V+ I+LP+ G AAG+ +EV G +  EFL IC  KI
Sbjct: 983  FIAPKSKRGFEEEFYTKPSSRKGPVVIKIELPYHGVAAGVGYEVKGFDNKEFLCICDSKI 1042

Query: 16   KIDQ 5
            KIDQ
Sbjct: 1043 KIDQ 1046