BLASTX nr result

ID: Coptis23_contig00012186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012186
         (1106 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275184.1| PREDICTED: uncharacterized protein LOC100256...   238   3e-60
emb|CBI15731.3| unnamed protein product [Vitis vinifera]              229   9e-58
ref|XP_002280705.1| PREDICTED: uncharacterized protein LOC100266...   229   9e-58
ref|XP_002512879.1| conserved hypothetical protein [Ricinus comm...   218   3e-54
ref|XP_003574842.1| PREDICTED: uncharacterized protein LOC100823...   199   1e-48

>ref|XP_002275184.1| PREDICTED: uncharacterized protein LOC100256630 [Vitis vinifera]
          Length = 759

 Score =  238 bits (606), Expect = 3e-60
 Identities = 140/287 (48%), Positives = 172/287 (59%), Gaps = 1/287 (0%)
 Frame = +2

Query: 2    VLSNPEKTPVHTYFCNYDLSDMPAGTKTFLRQKVTLASSGKTFKPPLKGGSRNVELKNEP 181
            VLSNPEKTP+H++FCNYDLSDMP+GTKTFLRQKVT+ SS  T  P + G  R+ ++K + 
Sbjct: 507  VLSNPEKTPLHSFFCNYDLSDMPSGTKTFLRQKVTIGSSCPT-SPRVNGEQRDHDMKVKD 565

Query: 182  DNASSSS-CPTVQLTXXXXXXXXXXXFQRMRSPNQCSEVQGIEGSTSMGYVSTCDTQQFQ 358
               SSS     V+ +              MRS    +  +G +GS  +  + T D  +  
Sbjct: 566  KLISSSDKSHQVENSREITTSYEFDMLNAMRSIEPSTSFEGRDGSDLVHSIDTRDAGRID 625

Query: 359  LPNRFHDREMINPPVFLPGICLQRPNGFNLTSPTEHMSEFDNCECQKTVLENVYNQIDMC 538
            +P+                  L    G N            + E  +T+    +   D C
Sbjct: 626  VPS------------------LLLEEGCN------------SAESSRTLESESWG--DAC 653

Query: 539  HENDRKSFCRFSKVNENTSGAGVLRYALHLRFLCPSRRKMSRSTQRCRSDSLSTSQLNNL 718
            +ENDRKS    SK NEN++ AG LRYALHLRFLCPS+ K SRS QRC+SD LS  Q   L
Sbjct: 654  NENDRKSAHGCSKANENSTSAGALRYALHLRFLCPSK-KCSRSIQRCKSDPLSIPQRTCL 712

Query: 719  DIDGERRFYLYNDLRVVFPQRHSDADEGKLNVEYHFPEDPKYFDISS 859
            DI+GERRFYLYNDLRVVFPQRHSDADEGKLNVEYH+PEDPKYFDI +
Sbjct: 713  DIEGERRFYLYNDLRVVFPQRHSDADEGKLNVEYHYPEDPKYFDIGN 759


>emb|CBI15731.3| unnamed protein product [Vitis vinifera]
          Length = 733

 Score =  229 bits (584), Expect = 9e-58
 Identities = 144/288 (50%), Positives = 171/288 (59%), Gaps = 2/288 (0%)
 Frame = +2

Query: 2    VLSNPEKTPVHTYFCNYDLSDMPAGTKTFLRQKVTLASSGKTFKPPLKGGSRNVELKNE- 178
            VLSNPEKTP+HT+ CNYDLSDMP+GTKTFLRQKVTLASS  T  P   GG R   +KN+ 
Sbjct: 479  VLSNPEKTPIHTFLCNYDLSDMPSGTKTFLRQKVTLASSRSTSVPG-NGGQRVPRMKNDV 537

Query: 179  -PDNASSSSCPTVQLTXXXXXXXXXXXFQRMRSPNQCSEVQGIEGSTSMGYVSTCDTQQF 355
             P   S++S                  F      +    ++    STS G V   +T   
Sbjct: 538  KPSLISNTS-----------HSLPSRDFSNSNGVDAAHTIR----STSQG-VEMIETA-- 579

Query: 356  QLPNRFHDREMINPPVFLPGICLQRPNGFNLTSPTEHMSEFDNCECQKTVLENVYNQIDM 535
             +P+   D      PV       +  +     SP  H S+ ++ E  KT   N    ++ 
Sbjct: 580  -VPDYTGD------PVH------RSQSNEEGGSPALHFSKLNSSEYLKTSRLN-NAPLNT 625

Query: 536  CHENDRKSFCRFSKVNENTSGAGVLRYALHLRFLCPSRRKMSRSTQRCRSDSLSTSQLNN 715
            CH  + KS    SKVNENT+GAGVLRYALHLRFLC   +K  RS QRC+SD LS    +N
Sbjct: 626  CHVTESKSVHSPSKVNENTTGAGVLRYALHLRFLCTPPKKCVRSIQRCKSDPLSVPTRDN 685

Query: 716  LDIDGERRFYLYNDLRVVFPQRHSDADEGKLNVEYHFPEDPKYFDISS 859
            +DIDGERRFYLYNDLRVVFPQRHSDADEGKL VEY FP DPKYFDIS+
Sbjct: 686  MDIDGERRFYLYNDLRVVFPQRHSDADEGKLQVEYDFPSDPKYFDISN 733


>ref|XP_002280705.1| PREDICTED: uncharacterized protein LOC100266395 [Vitis vinifera]
          Length = 765

 Score =  229 bits (584), Expect = 9e-58
 Identities = 144/288 (50%), Positives = 171/288 (59%), Gaps = 2/288 (0%)
 Frame = +2

Query: 2    VLSNPEKTPVHTYFCNYDLSDMPAGTKTFLRQKVTLASSGKTFKPPLKGGSRNVELKNE- 178
            VLSNPEKTP+HT+ CNYDLSDMP+GTKTFLRQKVTLASS  T  P   GG R   +KN+ 
Sbjct: 511  VLSNPEKTPIHTFLCNYDLSDMPSGTKTFLRQKVTLASSRSTSVPG-NGGQRVPRMKNDV 569

Query: 179  -PDNASSSSCPTVQLTXXXXXXXXXXXFQRMRSPNQCSEVQGIEGSTSMGYVSTCDTQQF 355
             P   S++S                  F      +    ++    STS G V   +T   
Sbjct: 570  KPSLISNTS-----------HSLPSRDFSNSNGVDAAHTIR----STSQG-VEMIETA-- 611

Query: 356  QLPNRFHDREMINPPVFLPGICLQRPNGFNLTSPTEHMSEFDNCECQKTVLENVYNQIDM 535
             +P+   D      PV       +  +     SP  H S+ ++ E  KT   N    ++ 
Sbjct: 612  -VPDYTGD------PVH------RSQSNEEGGSPALHFSKLNSSEYLKTSRLN-NAPLNT 657

Query: 536  CHENDRKSFCRFSKVNENTSGAGVLRYALHLRFLCPSRRKMSRSTQRCRSDSLSTSQLNN 715
            CH  + KS    SKVNENT+GAGVLRYALHLRFLC   +K  RS QRC+SD LS    +N
Sbjct: 658  CHVTESKSVHSPSKVNENTTGAGVLRYALHLRFLCTPPKKCVRSIQRCKSDPLSVPTRDN 717

Query: 716  LDIDGERRFYLYNDLRVVFPQRHSDADEGKLNVEYHFPEDPKYFDISS 859
            +DIDGERRFYLYNDLRVVFPQRHSDADEGKL VEY FP DPKYFDIS+
Sbjct: 718  MDIDGERRFYLYNDLRVVFPQRHSDADEGKLQVEYDFPSDPKYFDISN 765


>ref|XP_002512879.1| conserved hypothetical protein [Ricinus communis]
            gi|223547890|gb|EEF49382.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 753

 Score =  218 bits (554), Expect = 3e-54
 Identities = 133/290 (45%), Positives = 165/290 (56%), Gaps = 4/290 (1%)
 Frame = +2

Query: 2    VLSNPEKTPVHTYFCNYDLSDMPAGTKTFLRQKVTLASSGKTFKP----PLKGGSRNVEL 169
            VLSNPEKTP+HT+ CNYDLSDMPAGTKTFLRQKVTL +SG          +K G   ++ 
Sbjct: 509  VLSNPEKTPLHTFLCNYDLSDMPAGTKTFLRQKVTLDTSGTISSELKHRQMKHGQTGLDT 568

Query: 170  KNEPDNASSSSCPTVQLTXXXXXXXXXXXFQRMRSPNQCSEVQGIEGSTSMGYVSTCDTQ 349
            K +   AS+ +  +V                   + N+ SEV+GI+      Y     + 
Sbjct: 569  KMKDKMASNHTVNSVT------------------AMNENSEVKGID------YCELVVSD 604

Query: 350  QFQLPNRFHDREMINPPVFLPGICLQRPNGFNLTSPTEHMSEFDNCECQKTVLENVYNQI 529
               LP +  + E      F+ G                  ++  N  C  T  E     +
Sbjct: 605  TENLPKQSQNMEKAGVDSFMLG------------------NDCGNGNCHGTREE--CTGV 644

Query: 530  DMCHENDRKSFCRFSKVNENTSGAGVLRYALHLRFLCPSRRKMSRSTQRCRSDSLSTSQL 709
            D C   DR+S     KVNE T   G LRYALHLRF+CPS +K +RS QRC+SD  S  Q 
Sbjct: 645  DTCIGIDRRSAHGCLKVNE-TVQHGALRYALHLRFVCPSPKKSARSVQRCKSDPTSVPQK 703

Query: 710  NNLDIDGERRFYLYNDLRVVFPQRHSDADEGKLNVEYHFPEDPKYFDISS 859
             +LD++G+RRFYLYNDLRVVFPQRHSDADEGKLNVEYHFPEDP+YFDIS+
Sbjct: 704  KHLDVEGDRRFYLYNDLRVVFPQRHSDADEGKLNVEYHFPEDPRYFDISN 753


>ref|XP_003574842.1| PREDICTED: uncharacterized protein LOC100823798 [Brachypodium
            distachyon]
          Length = 708

 Score =  199 bits (505), Expect = 1e-48
 Identities = 122/288 (42%), Positives = 160/288 (55%), Gaps = 2/288 (0%)
 Frame = +2

Query: 2    VLSNPEKTPVHTYFCNYDLSDMPAGTKTFLRQKVTLASSGKTFKPPLKGGSRNVELKNEP 181
            V+SNPEKTP+HT+FCNYDL+DMP+GTKTF+RQKVTL+ +        +    +V   N  
Sbjct: 467  VVSNPEKTPIHTFFCNYDLTDMPSGTKTFMRQKVTLSPTVCPSNIVKEESKTSVGDTNVG 526

Query: 182  DNASSSSCPTVQLTXXXXXXXXXXXFQRMRSPNQCSEV-QGIEGSTSMGYVSTC-DTQQF 355
              A S SC +                  +     CSE   G + +++ G V  C + + +
Sbjct: 527  PKAQSVSCGS-----------------ELAQGAVCSEYCNGQKANSTDGSVKKCTNIKCY 569

Query: 356  QLPNRFHDREMINPPVFLPGICLQRPNGFNLTSPTEHMSEFDNCECQKTVLENVYNQIDM 535
             L +   +     PPV                   ++ S+ D+C CQ          +D 
Sbjct: 570  SLDSDMKESYKSTPPV-----------------NKKNNSDSDDCCCQ----------MDD 602

Query: 536  CHENDRKSFCRFSKVNENTSGAGVLRYALHLRFLCPSRRKMSRSTQRCRSDSLSTSQLNN 715
             H    KS C  SK+N++ SG GVLRYALHLRFLCP+ +K S+S  RC+SD LS     N
Sbjct: 603  IHSGANKSCCASSKINDS-SGVGVLRYALHLRFLCPASKKSSKSMLRCKSDPLSVPYSGN 661

Query: 716  LDIDGERRFYLYNDLRVVFPQRHSDADEGKLNVEYHFPEDPKYFDISS 859
              +  ERRFYLYNDLRVVFPQRHSD+DEG+L VE+ FP DPKYFDIS+
Sbjct: 662  T-VTEERRFYLYNDLRVVFPQRHSDSDEGELRVEHDFPADPKYFDISN 708


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