BLASTX nr result

ID: Coptis23_contig00012183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012183
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM64826.1| hypothetical protein [Beta vulgaris]                   75   7e-12
emb|CAB91629.1| hemoglobin [Cichorium intybus x Cichorium endivia]     74   1e-11
sp|Q941Q2.1|HBL2_BRANA RecName: Full=Non-symbiotic hemoglobin 2;...    72   4e-11
ref|NP_187663.1| non-symbiotic hemoglobin 2 [Arabidopsis thalian...    72   5e-11
ref|XP_002884795.1| non-symbiotic hemoglobin 2 [Arabidopsis lyra...    72   5e-11

>dbj|BAM64826.1| hypothetical protein [Beta vulgaris]
          Length = 155

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/48 (72%), Positives = 40/48 (83%)
 Frame = +3

Query: 198 MVFTEHQEILVKESWEAMKQNVPELSLQFFTTILEIAPAAKGMFSFLK 341
           M FTE  E LVKESW+ MKQN+PE SL+FF+ ILEIAPAAK MFSFL+
Sbjct: 1   MTFTEKDEALVKESWDIMKQNIPEYSLRFFSIILEIAPAAKNMFSFLR 48


>emb|CAB91629.1| hemoglobin [Cichorium intybus x Cichorium endivia]
          Length = 165

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/48 (70%), Positives = 41/48 (85%)
 Frame = +3

Query: 198 MVFTEHQEILVKESWEAMKQNVPELSLQFFTTILEIAPAAKGMFSFLK 341
           M F+E QE LVKE+WE MK+++P LSL FFT +LEIAPAAKG+FSFLK
Sbjct: 1   MSFSEEQEALVKEAWEIMKEDIPALSLYFFTQVLEIAPAAKGLFSFLK 48


>sp|Q941Q2.1|HBL2_BRANA RecName: Full=Non-symbiotic hemoglobin 2; AltName: Full=BRAna GLB2;
           AltName: Full=Hb2 gi|15809392|gb|AAK07741.1| class 2
           non-symbiotic hemoglobin [Brassica napus]
          Length = 161

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/48 (70%), Positives = 41/48 (85%)
 Frame = +3

Query: 198 MVFTEHQEILVKESWEAMKQNVPELSLQFFTTILEIAPAAKGMFSFLK 341
           +VFTE QE LVKESWE +KQ++P+ SL FF+ ILEIAPAAK MFSFL+
Sbjct: 4   IVFTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKDMFSFLR 51


>ref|NP_187663.1| non-symbiotic hemoglobin 2 [Arabidopsis thaliana]
           gi|17432971|sp|O24521.1|HBL2_ARATH RecName:
           Full=Non-symbiotic hemoglobin 2; AltName: Full=ARAth
           GLB2; Short=Hb2 gi|12322784|gb|AAG51381.1|AC011560_13
           class 2 non-symbiotic hemoglobin; 69592-70841
           [Arabidopsis thaliana] gi|2581785|gb|AAB82770.1| class 2
           non-symbiotic hemoglobin [Arabidopsis thaliana]
           gi|8567781|gb|AAF76353.1| class 2 non-symbiotic
           hemoglobin [Arabidopsis thaliana]
           gi|21593239|gb|AAM65188.1| Non-symbiotic hemoglobin Hb2
           [Arabidopsis thaliana] gi|114050613|gb|ABI49456.1|
           At3g10520 [Arabidopsis thaliana]
           gi|332641398|gb|AEE74919.1| non-symbiotic hemoglobin 2
           [Arabidopsis thaliana]
          Length = 158

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/46 (71%), Positives = 40/46 (86%)
 Frame = +3

Query: 204 FTEHQEILVKESWEAMKQNVPELSLQFFTTILEIAPAAKGMFSFLK 341
           FTE QE LVKESWE +KQ++P+ SL FF+ ILEIAPAAKG+FSFL+
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLR 51


>ref|XP_002884795.1| non-symbiotic hemoglobin 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297330635|gb|EFH61054.1| non-symbiotic hemoglobin 2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/46 (71%), Positives = 40/46 (86%)
 Frame = +3

Query: 204 FTEHQEILVKESWEAMKQNVPELSLQFFTTILEIAPAAKGMFSFLK 341
           FTE QE LVKESWE +KQ++P+ SL FF+ ILEIAPAAKG+FSFL+
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLR 51


Top