BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012167
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein...    69   4e-10
emb|CAC40748.1| putative ribosomal-like protein [Atropa belladonna]    68   7e-10
ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprot...    67   2e-09
ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|1...    66   3e-09
ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprot...    66   3e-09

>ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis] gi|223534772|gb|EEF36463.1| U3 small
           nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis]
          Length = 182

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = -2

Query: 272 YLVTRNMEDFITWVDSSKIKKAALEYHEKMDDYDAMN 162
           +LVTRNMEDF+TWVD+SKIK+  LEY+EK+DDYDAMN
Sbjct: 146 FLVTRNMEDFVTWVDTSKIKRKVLEYNEKLDDYDAMN 182


>emb|CAC40748.1| putative ribosomal-like protein [Atropa belladonna]
          Length = 58

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = -2

Query: 272 YLVTRNMEDFITWVDSSKIKKAALEYHEKMDDYDAMN 162
           +LVTRNMEDFITWVD+SKIK+  LEY++K+DDYDAMN
Sbjct: 22  FLVTRNMEDFITWVDTSKIKRKVLEYNDKLDDYDAMN 58


>ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis
           vinifera] gi|298204446|emb|CBI16926.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/37 (72%), Positives = 35/37 (94%)
 Frame = -2

Query: 272 YLVTRNMEDFITWVDSSKIKKAALEYHEKMDDYDAMN 162
           +LVTRN+EDF+TWVDSSKIK+  L+Y+E++DDYDAMN
Sbjct: 146 FLVTRNLEDFVTWVDSSKIKRKVLQYNERLDDYDAMN 182


>ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|118485533|gb|ABK94619.1|
           unknown [Populus trichocarpa]
           gi|222873150|gb|EEF10281.1| predicted protein [Populus
           trichocarpa]
          Length = 182

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = -2

Query: 272 YLVTRNMEDFITWVDSSKIKKAALEYHEKMDDYDAMN 162
           +LVTRN EDF+TWVD+SKIK+  LEY+EK+DDYDAMN
Sbjct: 146 FLVTRNTEDFVTWVDTSKIKRKVLEYNEKVDDYDAMN 182


>ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Glycine max] gi|356575988|ref|XP_003556117.1|
           PREDICTED: U3 small nucleolar ribonucleoprotein protein
           IMP3-like [Glycine max] gi|255637789|gb|ACU19216.1|
           unknown [Glycine max]
          Length = 182

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = -2

Query: 272 YLVTRNMEDFITWVDSSKIKKAALEYHEKMDDYDAMN 162
           +LVTRNMEDF+TWVDSSKIK+  L+Y++K+DDYD MN
Sbjct: 146 FLVTRNMEDFVTWVDSSKIKRKVLQYNDKLDDYDLMN 182