BLASTX nr result

ID: Coptis23_contig00012166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012166
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632166.1| PREDICTED: lysine-specific demethylase 8-lik...   218   5e-55
emb|CBI16425.3| unnamed protein product [Vitis vinifera]              218   5e-55
ref|XP_002299244.1| predicted protein [Populus trichocarpa] gi|2...   211   6e-53
ref|XP_003539394.1| PREDICTED: lysine-specific demethylase 8-lik...   210   1e-52
ref|XP_002883269.1| transcription factor jumonji domain-containi...   209   2e-52

>ref|XP_003632166.1| PREDICTED: lysine-specific demethylase 8-like [Vitis vinifera]
          Length = 411

 Score =  218 bits (554), Expect = 5e-55
 Identities = 99/127 (77%), Positives = 111/127 (87%)
 Frame = -3

Query: 381 LCDYFLSRTPVIVSDGMSHWPASKKWKDIDYLKRVAGDRTVPVEVGKNYLCQDWKQELIT 202
           LCDYF+S +PVI+SD M HWPA  +W D+DYLKRVAGDRTVPVEVGKNYL  DWKQELIT
Sbjct: 182 LCDYFMSGSPVIISDCMGHWPARTRWNDMDYLKRVAGDRTVPVEVGKNYLSSDWKQELIT 241

Query: 201 FSHFLERIQSNELSTTGPTYLAQHPLFEQIQELRGDILIPDYCFVGGGDLCSLNAWFGPA 22
           FS FLERIQS++ ++T PTYLAQHPLF+QI ELR DI IPDYC+ GGG+L SLNAWFGPA
Sbjct: 242 FSQFLERIQSSDCTSTLPTYLAQHPLFDQIHELRKDIFIPDYCYAGGGELRSLNAWFGPA 301

Query: 21  GTVTPLH 1
           GTVTPLH
Sbjct: 302 GTVTPLH 308


>emb|CBI16425.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score =  218 bits (554), Expect = 5e-55
 Identities = 99/127 (77%), Positives = 111/127 (87%)
 Frame = -3

Query: 381 LCDYFLSRTPVIVSDGMSHWPASKKWKDIDYLKRVAGDRTVPVEVGKNYLCQDWKQELIT 202
           LCDYF+S +PVI+SD M HWPA  +W D+DYLKRVAGDRTVPVEVGKNYL  DWKQELIT
Sbjct: 77  LCDYFMSGSPVIISDCMGHWPARTRWNDMDYLKRVAGDRTVPVEVGKNYLSSDWKQELIT 136

Query: 201 FSHFLERIQSNELSTTGPTYLAQHPLFEQIQELRGDILIPDYCFVGGGDLCSLNAWFGPA 22
           FS FLERIQS++ ++T PTYLAQHPLF+QI ELR DI IPDYC+ GGG+L SLNAWFGPA
Sbjct: 137 FSQFLERIQSSDCTSTLPTYLAQHPLFDQIHELRKDIFIPDYCYAGGGELRSLNAWFGPA 196

Query: 21  GTVTPLH 1
           GTVTPLH
Sbjct: 197 GTVTPLH 203


>ref|XP_002299244.1| predicted protein [Populus trichocarpa] gi|222846502|gb|EEE84049.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  211 bits (536), Expect = 6e-53
 Identities = 98/127 (77%), Positives = 110/127 (86%)
 Frame = -3

Query: 381 LCDYFLSRTPVIVSDGMSHWPASKKWKDIDYLKRVAGDRTVPVEVGKNYLCQDWKQELIT 202
           L ++FLS +PVI+SD M+HWPA  KW D+DYLKRVAGDRTVPVEVGKNYLCQ+WKQELIT
Sbjct: 184 LREHFLSGSPVIISDCMAHWPARTKWNDMDYLKRVAGDRTVPVEVGKNYLCQEWKQELIT 243

Query: 201 FSHFLERIQSNELSTTGPTYLAQHPLFEQIQELRGDILIPDYCFVGGGDLCSLNAWFGPA 22
           FS FLE+IQSN+ S+  PTYLAQH LF+QI ELR DI IPDYC  GGG+L SLNAWFGPA
Sbjct: 244 FSEFLEKIQSNDSSSAVPTYLAQHQLFDQINELRKDICIPDYCCAGGGELRSLNAWFGPA 303

Query: 21  GTVTPLH 1
           GTVTPLH
Sbjct: 304 GTVTPLH 310


>ref|XP_003539394.1| PREDICTED: lysine-specific demethylase 8-like [Glycine max]
          Length = 413

 Score =  210 bits (534), Expect = 1e-52
 Identities = 98/127 (77%), Positives = 107/127 (84%)
 Frame = -3

Query: 381 LCDYFLSRTPVIVSDGMSHWPASKKWKDIDYLKRVAGDRTVPVEVGKNYLCQDWKQELIT 202
           L D++LS  PVI+SD MSHWPA  KW D DYL RVAGDRTVPVEVGKNYLC +WKQELIT
Sbjct: 184 LKDHYLSGCPVIISDCMSHWPAKMKWNDEDYLLRVAGDRTVPVEVGKNYLCTEWKQELIT 243

Query: 201 FSHFLERIQSNELSTTGPTYLAQHPLFEQIQELRGDILIPDYCFVGGGDLCSLNAWFGPA 22
           FS FL+RI+S+  S  GPTYLAQHPLF+QI ELR DI IPDYCF GGG+L SLNAWFGPA
Sbjct: 244 FSEFLQRIKSDSCSPGGPTYLAQHPLFDQINELRKDIFIPDYCFTGGGELRSLNAWFGPA 303

Query: 21  GTVTPLH 1
           GTVTPLH
Sbjct: 304 GTVTPLH 310


>ref|XP_002883269.1| transcription factor jumonji domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297329109|gb|EFH59528.1|
           transcription factor jumonji domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 429

 Score =  209 bits (532), Expect = 2e-52
 Identities = 95/127 (74%), Positives = 108/127 (85%)
 Frame = -3

Query: 381 LCDYFLSRTPVIVSDGMSHWPASKKWKDIDYLKRVAGDRTVPVEVGKNYLCQDWKQELIT 202
           L DYFLS TPV++++ M+HWPA  KW  +DYL  VAG+RTVPVEVGKNYLC DWKQEL+T
Sbjct: 200 LRDYFLSGTPVVITNSMAHWPARTKWNHLDYLNAVAGNRTVPVEVGKNYLCSDWKQELVT 259

Query: 201 FSHFLERIQSNELSTTGPTYLAQHPLFEQIQELRGDILIPDYCFVGGGDLCSLNAWFGPA 22
           FS FLERI++N+ S   PTYLAQHPLF+QI ELR DI IPDYCFVGGG+L SLNAWFGPA
Sbjct: 260 FSKFLERIRTNKSSPMEPTYLAQHPLFDQINELRDDICIPDYCFVGGGELQSLNAWFGPA 319

Query: 21  GTVTPLH 1
           GTVTPLH
Sbjct: 320 GTVTPLH 326


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