BLASTX nr result

ID: Coptis23_contig00012165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012165
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263194.2| PREDICTED: uncharacterized protein LOC100250...   167   2e-39
emb|CBI38418.3| unnamed protein product [Vitis vinifera]              167   2e-39
emb|CBI37752.3| unnamed protein product [Vitis vinifera]              164   1e-38
ref|XP_002282473.2| PREDICTED: ubiquilin-1-like [Vitis vinifera]      163   3e-38
emb|CAN59899.1| hypothetical protein VITISV_002886 [Vitis vinifera]   162   5e-38

>ref|XP_002263194.2| PREDICTED: uncharacterized protein LOC100250759 [Vitis vinifera]
          Length = 483

 Score =  167 bits (424), Expect = 2e-39
 Identities = 90/152 (59%), Positives = 105/152 (69%), Gaps = 3/152 (1%)
 Frame = +2

Query: 2   PQAMNRVLG--PQMQNMLDSNPQLREMMQNPNFVSRLTSPETXXXXXXXXXXXXXXXXXX 175
           PQ MN++LG  PQ++++LDSNPQLREMMQNP F+ +LTSPET                  
Sbjct: 332 PQYMNQILGLNPQLRSVLDSNPQLREMMQNPEFLRQLTSPETMQQFLTLQQSLLSQLGRQ 391

Query: 176 XXXXXXXXXXGAGG-LSNMGLDFWMNMLGFLGAAGVNVPNTPNVPAEQLYANQLSQLQEM 352
                     G  G L+NMGL+  MNM G LGA  +N+P+  +VP EQLYA QLSQLQEM
Sbjct: 392 QSSQESGQTGGGTGMLNNMGLEMLMNMFGGLGAGSMNIPSRSDVPPEQLYATQLSQLQEM 451

Query: 353 GFFDTQENIRALSVTAGNVHAAVERLLGNPGQ 448
           GFFDTQENIRAL+ TAGNVHAAVERLLGNPGQ
Sbjct: 452 GFFDTQENIRALTATAGNVHAAVERLLGNPGQ 483


>emb|CBI38418.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  167 bits (423), Expect = 2e-39
 Identities = 90/153 (58%), Positives = 105/153 (68%), Gaps = 4/153 (2%)
 Frame = +2

Query: 2   PQAMNRVLG--PQMQNMLDSNPQLREMMQNPNFVSRLTSPETXXXXXXXXXXXXXXXXXX 175
           PQ MN++LG  PQ++++LDSNPQLREMMQNP F+ +LTSPET                  
Sbjct: 143 PQYMNQILGLNPQLRSVLDSNPQLREMMQNPEFLRQLTSPETMQQFLTLQQSLLSQLGRQ 202

Query: 176 XXXXXXXXXXGAGG--LSNMGLDFWMNMLGFLGAAGVNVPNTPNVPAEQLYANQLSQLQE 349
                     G  G  L+NMGL+  MNM G LGA  +N+P+  +VP EQLYA QLSQLQE
Sbjct: 203 QSSQESGQTGGGTGGMLNNMGLEMLMNMFGGLGAGSMNIPSRSDVPPEQLYATQLSQLQE 262

Query: 350 MGFFDTQENIRALSVTAGNVHAAVERLLGNPGQ 448
           MGFFDTQENIRAL+ TAGNVHAAVERLLGNPGQ
Sbjct: 263 MGFFDTQENIRALTATAGNVHAAVERLLGNPGQ 295


>emb|CBI37752.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  164 bits (416), Expect = 1e-38
 Identities = 90/154 (58%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
 Frame = +2

Query: 2   PQAMNRVLG--PQMQNMLDSNPQLREMMQNPNFVSRLTSPETXXXXXXXXXXXXXXXXXX 175
           PQ MN++L   PQ++ MLD NPQLRE+MQNP  + +LTSPET                  
Sbjct: 138 PQYMNQILNFNPQLRGMLDMNPQLREIMQNPELLRQLTSPETMQQMMSLQQSLLSQLNRQ 197

Query: 176 XXXXXXXXXXG---AGGLSNMGLDFWMNMLGFLGAAGVNVPNTPNVPAEQLYANQLSQLQ 346
                     G   AG  +N+GLD  MNM G LGA  +NVPNTP+VP EQLYA QLSQLQ
Sbjct: 198 QSTQEPGQTGGGTTAGTPNNIGLDLLMNMFGGLGAGSLNVPNTPDVPPEQLYATQLSQLQ 257

Query: 347 EMGFFDTQENIRALSVTAGNVHAAVERLLGNPGQ 448
           EMGFFDTQENIRAL  T+GNVHAAVERLLGNPGQ
Sbjct: 258 EMGFFDTQENIRALRATSGNVHAAVERLLGNPGQ 291


>ref|XP_002282473.2| PREDICTED: ubiquilin-1-like [Vitis vinifera]
          Length = 558

 Score =  163 bits (413), Expect = 3e-38
 Identities = 89/153 (58%), Positives = 101/153 (66%), Gaps = 4/153 (2%)
 Frame = +2

Query: 2   PQAMNRVLG--PQMQNMLDSNPQLREMMQNPNFVSRLTSPETXXXXXXXXXXXXXXXXXX 175
           PQ MN++L   PQ++ MLD NPQLRE+MQNP  + +LTSPET                  
Sbjct: 406 PQYMNQILNFNPQLRGMLDMNPQLREIMQNPELLRQLTSPETMQQMMSLQQSLLSQLNRQ 465

Query: 176 XXXXXXXXXXGA--GGLSNMGLDFWMNMLGFLGAAGVNVPNTPNVPAEQLYANQLSQLQE 349
                     G   G  +N+GLD  MNM G LGA  +NVPNTP+VP EQLYA QLSQLQE
Sbjct: 466 QSTQEPGQTGGGTTGTPNNIGLDLLMNMFGGLGAGSLNVPNTPDVPPEQLYATQLSQLQE 525

Query: 350 MGFFDTQENIRALSVTAGNVHAAVERLLGNPGQ 448
           MGFFDTQENIRAL  T+GNVHAAVERLLGNPGQ
Sbjct: 526 MGFFDTQENIRALRATSGNVHAAVERLLGNPGQ 558


>emb|CAN59899.1| hypothetical protein VITISV_002886 [Vitis vinifera]
          Length = 566

 Score =  162 bits (411), Expect = 5e-38
 Identities = 89/153 (58%), Positives = 100/153 (65%), Gaps = 4/153 (2%)
 Frame = +2

Query: 2   PQAMNRVLG--PQMQNMLDSNPQLREMMQNPNFVSRLTSPETXXXXXXXXXXXXXXXXXX 175
           PQ MN++L   PQ++ MLD NPQLRE+MQNP  + +LTSPET                  
Sbjct: 414 PQYMNQILNFNPQLRGMLDMNPQLREIMQNPELLRQLTSPETMQQMMSLQQSLLSQLNRQ 473

Query: 176 XXXXXXXXXXGA--GGLSNMGLDFWMNMLGFLGAAGVNVPNTPNVPAEQLYANQLSQLQE 349
                     G   G  +N+GLD  MNM G LGA  +NVPNTP+VP EQLYA QLSQLQE
Sbjct: 474 QSTQEPGQTGGGTTGTPNNIGLDLLMNMFGGLGAGSLNVPNTPDVPPEQLYATQLSQLQE 533

Query: 350 MGFFDTQENIRALSVTAGNVHAAVERLLGNPGQ 448
           MGFFDTQENIRAL  T GNVHAAVERLLGNPGQ
Sbjct: 534 MGFFDTQENIRALRATXGNVHAAVERLLGNPGQ 566


Top