BLASTX nr result

ID: Coptis23_contig00012164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012164
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635085.1| PREDICTED: thioredoxin-like protein HCF164, ...   342   9e-92
ref|XP_003517272.1| PREDICTED: thioredoxin-like protein HCF164, ...   337   4e-90
ref|XP_002310771.1| predicted protein [Populus trichocarpa] gi|2...   334   2e-89
ref|XP_004141943.1| PREDICTED: thioredoxin-like protein HCF164, ...   328   1e-87
ref|XP_003611852.1| Protein disulfide-isomerase [Medicago trunca...   327   2e-87

>ref|XP_003635085.1| PREDICTED: thioredoxin-like protein HCF164, chloroplastic-like [Vitis
            vinifera] gi|298205068|emb|CBI38364.3| unnamed protein
            product [Vitis vinifera]
          Length = 264

 Score =  342 bits (877), Expect = 9e-92
 Identities = 171/262 (65%), Positives = 202/262 (77%), Gaps = 2/262 (0%)
 Frame = -2

Query: 1064 MARVLSNPINLNRFQPSSQASFPRRRSASLPRQKN-IGGFRGNKLVCQANPDPNXXXXXX 888
            M+RV S+P+ L+RF+P  QAS PR    +  +  N +  F+   + CQ  P+P       
Sbjct: 1    MSRVASSPVGLHRFRPCLQASQPRHVFKTHVQSPNRVTRFQNIAIACQTTPNPTPTDSST 60

Query: 887  XXXXXXXXXEKNQT-SETMNSTQNAGFIEFPNRSINRKIALASTFAAVGLFLSTRLDFGV 711
                       N   ++  +S+ + G  EFP++ INR+IA+ S+ AAVGLFLS RLDFGV
Sbjct: 61   TEKPPVEPGSVNDNVTQAASSSTDPGLPEFPSKDINRRIAVVSSLAAVGLFLSKRLDFGV 120

Query: 710  SLKDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNVD 531
            SLKDLS AALPYEEALSNG+PTVVEFYADWCEVCRELAPDVYKVEQQY+DRVNFVMLNVD
Sbjct: 121  SLKDLSAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQYRDRVNFVMLNVD 180

Query: 530  NTKWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENVDALARGKASVPHARA 351
            NTKWEQELDEFGVEGIPHF FLDKEGNEEGNVVGRLP++Y  ENV+ALA G+AS+PHAR 
Sbjct: 181  NTKWEQELDEFGVEGIPHFAFLDKEGNEEGNVVGRLPKQYFQENVEALAHGEASIPHARV 240

Query: 350  VGQYTSAEARKVHRVTDPRSHG 285
            VGQY+SAE+RKVH+V DPRSHG
Sbjct: 241  VGQYSSAESRKVHQVVDPRSHG 262


>ref|XP_003517272.1| PREDICTED: thioredoxin-like protein HCF164, chloroplastic-like
            [Glycine max]
          Length = 252

 Score =  337 bits (863), Expect = 4e-90
 Identities = 177/261 (67%), Positives = 199/261 (76%), Gaps = 1/261 (0%)
 Frame = -2

Query: 1064 MARVLS-NPINLNRFQPSSQASFPRRRSASLPRQKNIGGFRGNKLVCQANPDPNXXXXXX 888
            MAR++S NPI L+RFQP    S  R  SA+  R++     +   L CQ NP+ +      
Sbjct: 1    MARLISSNPIALHRFQPCLPIS--RHFSANPRRRRPTNTRKLQTLACQTNPNLDQKDTPT 58

Query: 887  XXXXXXXXXEKNQTSETMNSTQNAGFIEFPNRSINRKIALASTFAAVGLFLSTRLDFGVS 708
                      +    E   ST  +   + P ++IN KIAL ST AA+GLFLS RLDFGVS
Sbjct: 59   TDE-------EKLVVEPSTSTTTSSLPQLPTKNINNKIALVSTLAALGLFLSARLDFGVS 111

Query: 707  LKDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNVDN 528
            LKDLS  A+PYEEALSNG+PTVVEFYADWCEVCRELAPDVYKVEQQ+KDRVNFVMLNVDN
Sbjct: 112  LKDLSANAMPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDN 171

Query: 527  TKWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENVDALARGKASVPHARAV 348
            TKWEQELDEFGVEGIPHF FLDKEGNEEGNVVGRLPR+YLLENVDALARG+ASVPHAR V
Sbjct: 172  TKWEQELDEFGVEGIPHFAFLDKEGNEEGNVVGRLPRQYLLENVDALARGEASVPHARVV 231

Query: 347  GQYTSAEARKVHRVTDPRSHG 285
            GQY+SAEARKVH+V DPRSHG
Sbjct: 232  GQYSSAEARKVHQVADPRSHG 252


>ref|XP_002310771.1| predicted protein [Populus trichocarpa] gi|222853674|gb|EEE91221.1|
            predicted protein [Populus trichocarpa]
          Length = 260

 Score =  334 bits (857), Expect = 2e-89
 Identities = 174/263 (66%), Positives = 201/263 (76%), Gaps = 3/263 (1%)
 Frame = -2

Query: 1064 MARVLSNPINLNRFQPSSQASF--PRRRSASLPRQKNIGGFRGNKLVCQANPDPNXXXXX 891
            MARV SNP+ ++RF+P  QAS   P    +++  Q     F    + CQ NPD +     
Sbjct: 1    MARVASNPLCIHRFRPYLQASHSSPSLLKSTVHYQTKPRKFPA--VSCQTNPDSSETSTP 58

Query: 890  XXXXXXXXXXEKNQTS-ETMNSTQNAGFIEFPNRSINRKIALASTFAAVGLFLSTRLDFG 714
                        + T  E   ++Q++G  EFPN+ +N++IA+ S  AA GLFLS+RLDFG
Sbjct: 59   TEKEVLEPGPVSDDTKREDTGASQDSGLPEFPNKDVNKRIAVVSLLAAAGLFLSSRLDFG 118

Query: 713  VSLKDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNV 534
            VSLKDLSVAALPYEEALSNG+PTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNV
Sbjct: 119  VSLKDLSVAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNV 178

Query: 533  DNTKWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENVDALARGKASVPHAR 354
            DNTKWEQELDEFGVEGIPHF FLD+EGNEEGNVVGRLPRKYLLENV+ALARG+ S+PHAR
Sbjct: 179  DNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRKYLLENVEALARGEGSIPHAR 238

Query: 353  AVGQYTSAEARKVHRVTDPRSHG 285
             VGQY++AE RKV R  DPRSHG
Sbjct: 239  VVGQYSNAENRKV-RSVDPRSHG 260


>ref|XP_004141943.1| PREDICTED: thioredoxin-like protein HCF164, chloroplastic-like
           [Cucumis sativus] gi|449497723|ref|XP_004160496.1|
           PREDICTED: thioredoxin-like protein HCF164,
           chloroplastic-like [Cucumis sativus]
          Length = 259

 Score =  328 bits (841), Expect = 1e-87
 Identities = 157/217 (72%), Positives = 181/217 (83%)
 Frame = -2

Query: 935 LVCQANPDPNXXXXXXXXXXXXXXXEKNQTSETMNSTQNAGFIEFPNRSINRKIALASTF 756
           L CQ  P+ +                 + T +  +S+ N GF EFPN+ INR++A+ ST 
Sbjct: 43  LACQTLPESHDTTSAPEKSSNGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTV 102

Query: 755 AAVGLFLSTRLDFGVSLKDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVE 576
           +A+ LF S+RLDFGVSLKDL+ AALPYEEALSNG+PTVVEFYADWCEVCRELAPDVYKVE
Sbjct: 103 SALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVE 162

Query: 575 QQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENV 396
           QQ+KDRVNFVMLNVDNTKWEQELDEFGVEGIPHF FLDK+GNEEGNVVGRLPR+YLLENV
Sbjct: 163 QQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENV 222

Query: 395 DALARGKASVPHARAVGQYTSAEARKVHRVTDPRSHG 285
           DALARG+AS+PHAR VGQ++SAEARKVH+V+DPRSHG
Sbjct: 223 DALARGEASIPHARVVGQFSSAEARKVHQVSDPRSHG 259


>ref|XP_003611852.1| Protein disulfide-isomerase [Medicago truncatula]
            gi|355513187|gb|AES94810.1| Protein disulfide-isomerase
            [Medicago truncatula]
          Length = 261

 Score =  327 bits (839), Expect = 2e-87
 Identities = 168/264 (63%), Positives = 197/264 (74%), Gaps = 4/264 (1%)
 Frame = -2

Query: 1064 MARVLSNPINLNRFQPSSQASFPRRRSASLPRQKNIGGFRGNKLVCQANPDPNXXXXXXX 885
            MAR+  NPI  +RFQP       ++ +   PR ++I   +   L  Q +P+ N       
Sbjct: 1    MARLSLNPIGFHRFQPCLHLQPSQQFTLYPPRHRHI---KFLTLASQTDPNHNEKDNTTS 57

Query: 884  XXXXXXXXEKNQTSETMNSTQNA----GFIEFPNRSINRKIALASTFAAVGLFLSTRLDF 717
                     +  TS +  +T +A       + P++ INRKIA+ ST AA+GLF+  RLDF
Sbjct: 58   TTPEIKVVVEPSTSSSKPTTTSAVDSTSLPQLPSKDINRKIAIVSTLAALGLFVFARLDF 117

Query: 716  GVSLKDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLN 537
            GVSLKDLS  ALPYE+ALSNG+PTVVEFYADWCEVCRELAPDVYK+EQQYK++VNFVMLN
Sbjct: 118  GVSLKDLSAVALPYEQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKNKVNFVMLN 177

Query: 536  VDNTKWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENVDALARGKASVPHA 357
            VDNTKWEQELDEFGVEGIPHF FLDKEGNEEGNVVGRLPR+YLLENVDALARG+ SVPHA
Sbjct: 178  VDNTKWEQELDEFGVEGIPHFAFLDKEGNEEGNVVGRLPRQYLLENVDALARGETSVPHA 237

Query: 356  RAVGQYTSAEARKVHRVTDPRSHG 285
            R VGQY+SAEARKVH+V DPRSHG
Sbjct: 238  RVVGQYSSAEARKVHQVVDPRSHG 261


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