BLASTX nr result

ID: Coptis23_contig00012143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012143
         (1544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272701.1| PREDICTED: aminomethyltransferase, mitochond...   743   0.0  
gb|AFK43189.1| unknown [Lotus japonicus]                              735   0.0  
gb|ADN34064.1| aminomethyltransferase [Cucumis melo subsp. melo]      729   0.0  
ref|XP_003534551.1| PREDICTED: LOW QUALITY PROTEIN: aminomethylt...   728   0.0  
sp|P54260.1|GCST_SOLTU RecName: Full=Aminomethyltransferase, mit...   728   0.0  

>ref|XP_002272701.1| PREDICTED: aminomethyltransferase, mitochondrial [Vitis vinifera]
          Length = 408

 Score =  743 bits (1918), Expect = 0.0
 Identities = 356/408 (87%), Positives = 384/408 (94%)
 Frame = +3

Query: 150  MRGGGLWQLGQSITRRLTQTDKKVVARRYFASEAELKKTALYDLHVANGGKMVPFAGWSM 329
            MRGGGLWQLGQSITRRL Q DKK VARR FASEAELKKT LYD H+ANGGKMVPFAGWSM
Sbjct: 1    MRGGGLWQLGQSITRRLAQADKKAVARRCFASEAELKKTVLYDFHIANGGKMVPFAGWSM 60

Query: 330  PIQYKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLETLVIGDIAGLAPGTGTLS 509
            PIQYKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLE LVI D+AGLAPGTGTL+
Sbjct: 61   PIQYKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLEKLVIADVAGLAPGTGTLT 120

Query: 510  VLTNEKGGAIDDTVITKVKDDHIYLVVNAGCRDKDLDHIGGHMKAFQAKGGDVSWHIHDE 689
            V TNEKGGAIDD+VITKVKD+HIYLVVNAGCRDKDL HI  HMKA+++KGGDVSWHIHDE
Sbjct: 121  VFTNEKGGAIDDSVITKVKDNHIYLVVNAGCRDKDLAHIEEHMKAYKSKGGDVSWHIHDE 180

Query: 690  RSLLALQGPLAAPVLQHLTKDDLSKVYFGEFRMLDINGVHCYITRTGYTGEDGFEISVPS 869
            RSLLALQGPLAAPVLQHLTK+DLSK++FGEF++LDING  C++TRTGYTGEDGFEISVPS
Sbjct: 181  RSLLALQGPLAAPVLQHLTKEDLSKLFFGEFQILDINGATCFLTRTGYTGEDGFEISVPS 240

Query: 870  ENALDLTKAILEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKR 1049
            ENA+DL KAILEKSEGK+RLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKR
Sbjct: 241  ENAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKR 300

Query: 1050 RRAEGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRTHCEILDGEGKSLGEVTSGGFSPC 1229
            RRAEGGFLGAEVILKQ+EEGP +RRVGFFSSGPP R+H EI D +G ++GE+TSGGFSPC
Sbjct: 301  RRAEGGFLGAEVILKQLEEGPSVRRVGFFSSGPPARSHSEIQDDKGNNIGEITSGGFSPC 360

Query: 1230 LKKNIGMGYVKSGFHKAGTKVNVVIRGKSYDGVVTKMPFVPSKYYKPT 1373
            LKKNIGMGYVKSG HKAGTKV ++IRGK YDGVVTKMPFVP+KYYKP+
Sbjct: 361  LKKNIGMGYVKSGSHKAGTKVKILIRGKPYDGVVTKMPFVPTKYYKPS 408


>gb|AFK43189.1| unknown [Lotus japonicus]
          Length = 407

 Score =  735 bits (1898), Expect = 0.0
 Identities = 356/405 (87%), Positives = 377/405 (93%)
 Frame = +3

Query: 159  GGLWQLGQSITRRLTQTDKKVVARRYFASEAELKKTALYDLHVANGGKMVPFAGWSMPIQ 338
            GGLWQLGQSITRRLTQ DKK VA RYFASEAELKKTALYD HV NGGKMVPFAGWSMPIQ
Sbjct: 3    GGLWQLGQSITRRLTQGDKKAVACRYFASEAELKKTALYDFHVVNGGKMVPFAGWSMPIQ 62

Query: 339  YKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLETLVIGDIAGLAPGTGTLSVLT 518
            YKDSIMDST+NCRENGSLFDVSHMCGLSLKGKD +PFLE LVI D+A LAPGTG+L+V T
Sbjct: 63   YKDSIMDSTLNCRENGSLFDVSHMCGLSLKGKDAVPFLEKLVIADVASLAPGTGSLTVFT 122

Query: 519  NEKGGAIDDTVITKVKDDHIYLVVNAGCRDKDLDHIGGHMKAFQAKGGDVSWHIHDERSL 698
            NEKGGAIDD+VITKV DDHIYLVVNAGCRDKDL HI  HMKAF+AKGGDVSWHIHDERSL
Sbjct: 123  NEKGGAIDDSVITKVADDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSL 182

Query: 699  LALQGPLAAPVLQHLTKDDLSKVYFGEFRMLDINGVHCYITRTGYTGEDGFEISVPSENA 878
            LALQGPLA PVLQHLTKDDLSK YFGEFR+LDING  C++TRTGYTGEDGFEISVPSENA
Sbjct: 183  LALQGPLAGPVLQHLTKDDLSKFYFGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSENA 242

Query: 879  LDLTKAILEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRA 1058
            LDLTKAILEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQH+TPVEAGLTWAIGKRRRA
Sbjct: 243  LDLTKAILEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHITPVEAGLTWAIGKRRRA 302

Query: 1059 EGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRTHCEILDGEGKSLGEVTSGGFSPCLKK 1238
            EGGFLGAEVILKQ+ EGPKIRRVGFFSSGPPPR+H E+ D  G ++GEVTSGGFSPCLKK
Sbjct: 303  EGGFLGAEVILKQLAEGPKIRRVGFFSSGPPPRSHSEVQDEGGNNIGEVTSGGFSPCLKK 362

Query: 1239 NIGMGYVKSGFHKAGTKVNVVIRGKSYDGVVTKMPFVPSKYYKPT 1373
            NI MGYVKSG HKAGTKV ++IRGK+ +GVVTKMPFVP+KYYKPT
Sbjct: 363  NIAMGYVKSGLHKAGTKVKIIIRGKANEGVVTKMPFVPTKYYKPT 407


>gb|ADN34064.1| aminomethyltransferase [Cucumis melo subsp. melo]
          Length = 407

 Score =  729 bits (1883), Expect = 0.0
 Identities = 349/405 (86%), Positives = 378/405 (93%)
 Frame = +3

Query: 159  GGLWQLGQSITRRLTQTDKKVVARRYFASEAELKKTALYDLHVANGGKMVPFAGWSMPIQ 338
            GGLWQLGQSITRRL QTDKK V RR+F++E+ELKKT LYD HV +GGKMVPFAGWSMPIQ
Sbjct: 3    GGLWQLGQSITRRLAQTDKKTVGRRFFSAESELKKTVLYDFHVTHGGKMVPFAGWSMPIQ 62

Query: 339  YKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLETLVIGDIAGLAPGTGTLSVLT 518
            YKDSIMDSTVNCR+NG LFDVSHMCGLSLKGKD IPFLE LV+ D+AGLAPGTGTL+V T
Sbjct: 63   YKDSIMDSTVNCRQNGGLFDVSHMCGLSLKGKDSIPFLEKLVVADVAGLAPGTGTLTVFT 122

Query: 519  NEKGGAIDDTVITKVKDDHIYLVVNAGCRDKDLDHIGGHMKAFQAKGGDVSWHIHDERSL 698
            NEKGGAIDD+VITKV DDHIYLVVNAGCRDKDL HI  HMKAF+AKGGDVSWHIHDERSL
Sbjct: 123  NEKGGAIDDSVITKVTDDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSL 182

Query: 699  LALQGPLAAPVLQHLTKDDLSKVYFGEFRMLDINGVHCYITRTGYTGEDGFEISVPSENA 878
            LALQGPLAAPVLQ+LTKDDLSK+YFGEFR+LDING  C++TRTGYTGEDGFEISVPSENA
Sbjct: 183  LALQGPLAAPVLQYLTKDDLSKLYFGEFRILDINGARCFLTRTGYTGEDGFEISVPSENA 242

Query: 879  LDLTKAILEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRA 1058
            LDL KAILEKSEGK+RLTGLGARDSLRLEAGLCLYGNDMEQH+TPVEAGLTWAIGKRRRA
Sbjct: 243  LDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHITPVEAGLTWAIGKRRRA 302

Query: 1059 EGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRTHCEILDGEGKSLGEVTSGGFSPCLKK 1238
            EGGFLGAEVILKQ+E+GP IRRVGFFSSGPP R+H EI +  GK++GEVTSGGFSPCLKK
Sbjct: 303  EGGFLGAEVILKQLEDGPAIRRVGFFSSGPPARSHSEIQNEGGKNIGEVTSGGFSPCLKK 362

Query: 1239 NIGMGYVKSGFHKAGTKVNVVIRGKSYDGVVTKMPFVPSKYYKPT 1373
            NI MGYVKSG HKAGTKV +++RGK+YDGVVTKMPFVP+KYYKPT
Sbjct: 363  NIAMGYVKSGSHKAGTKVKIIVRGKAYDGVVTKMPFVPTKYYKPT 407


>ref|XP_003534551.1| PREDICTED: LOW QUALITY PROTEIN: aminomethyltransferase,
            mitochondrial-like [Glycine max]
          Length = 407

 Score =  728 bits (1880), Expect = 0.0
 Identities = 349/405 (86%), Positives = 380/405 (93%)
 Frame = +3

Query: 159  GGLWQLGQSITRRLTQTDKKVVARRYFASEAELKKTALYDLHVANGGKMVPFAGWSMPIQ 338
            GGLWQLGQSITRRL Q DKK VARRYFAS+AELKKT +YD HVANGGKMVPFAGWSMPIQ
Sbjct: 3    GGLWQLGQSITRRLAQGDKKAVARRYFASDAELKKTVVYDFHVANGGKMVPFAGWSMPIQ 62

Query: 339  YKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLETLVIGDIAGLAPGTGTLSVLT 518
            YKDSIMDST+NCRENGSLFDVSHMCGLSLKGKD +PFLE LVI D+AGLAPGTG+L+V T
Sbjct: 63   YKDSIMDSTLNCRENGSLFDVSHMCGLSLKGKDSVPFLEKLVIADVAGLAPGTGSLTVFT 122

Query: 519  NEKGGAIDDTVITKVKDDHIYLVVNAGCRDKDLDHIGGHMKAFQAKGGDVSWHIHDERSL 698
            NEKGGAIDD+VITKVKDDHIYLVVNAGCRDKDL HI  HMKAF+AKGGDVSWHIHDERSL
Sbjct: 123  NEKGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSL 182

Query: 699  LALQGPLAAPVLQHLTKDDLSKVYFGEFRMLDINGVHCYITRTGYTGEDGFEISVPSENA 878
            LALQGPLAAPVLQHLTK DLSK+YFG F++LDINGV C++TRTGYTGEDGFEIS+PSE+A
Sbjct: 183  LALQGPLAAPVLQHLTKADLSKMYFGGFQVLDINGVQCFLTRTGYTGEDGFEISIPSESA 242

Query: 879  LDLTKAILEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRA 1058
            +DL KAILEKSEGKIRLTGLGARDSLRLEAGLCLYGND+EQH+TP+EAGLTWAIGKRRRA
Sbjct: 243  VDLAKAILEKSEGKIRLTGLGARDSLRLEAGLCLYGNDLEQHITPIEAGLTWAIGKRRRA 302

Query: 1059 EGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRTHCEILDGEGKSLGEVTSGGFSPCLKK 1238
            EGGFLGA+VILKQ+EEGPKIRRVGFFSSGPPPR+H EI D  G ++GEVTSGGFSPCLKK
Sbjct: 303  EGGFLGADVILKQLEEGPKIRRVGFFSSGPPPRSHSEIQDEGGNNIGEVTSGGFSPCLKK 362

Query: 1239 NIGMGYVKSGFHKAGTKVNVVIRGKSYDGVVTKMPFVPSKYYKPT 1373
            NI +GYVKSG HKAGTKV ++IRGKS +GVVTKMPFVP+KYYKP+
Sbjct: 363  NIAIGYVKSGLHKAGTKVKIIIRGKSNEGVVTKMPFVPTKYYKPS 407


>sp|P54260.1|GCST_SOLTU RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
            Full=Glycine cleavage system T protein; Short=GCVT;
            Flags: Precursor gi|438254|emb|CAA81081.1| T-protein
            [Solanum tuberosum]
          Length = 406

 Score =  728 bits (1880), Expect = 0.0
 Identities = 350/404 (86%), Positives = 376/404 (93%)
 Frame = +3

Query: 159  GGLWQLGQSITRRLTQTDKKVVARRYFASEAELKKTALYDLHVANGGKMVPFAGWSMPIQ 338
            GGLWQLGQSITRRL Q DKK + RR FAS+A+LKKT LYD HV NGGKMVPFAGWSMPIQ
Sbjct: 3    GGLWQLGQSITRRLAQADKKTIGRRCFASDADLKKTVLYDFHVVNGGKMVPFAGWSMPIQ 62

Query: 339  YKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLETLVIGDIAGLAPGTGTLSVLT 518
            YKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKD IPFLE LVI D+AGLAPGTG+L+V T
Sbjct: 63   YKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDTIPFLEKLVIADVAGLAPGTGSLTVFT 122

Query: 519  NEKGGAIDDTVITKVKDDHIYLVVNAGCRDKDLDHIGGHMKAFQAKGGDVSWHIHDERSL 698
            NEKGGAIDD+V+TKV +DHIYLVVNAGCRDKDL HI  HMK+F++KGGDVSWHIHDERSL
Sbjct: 123  NEKGGAIDDSVVTKVTNDHIYLVVNAGCRDKDLAHIEEHMKSFKSKGGDVSWHIHDERSL 182

Query: 699  LALQGPLAAPVLQHLTKDDLSKVYFGEFRMLDINGVHCYITRTGYTGEDGFEISVPSENA 878
            LALQGPLAAPVLQ+LTKDDLSK+YFGEFR+LDING  C++TRTGYTGEDGFEISVPSENA
Sbjct: 183  LALQGPLAAPVLQYLTKDDLSKMYFGEFRVLDINGAPCFLTRTGYTGEDGFEISVPSENA 242

Query: 879  LDLTKAILEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRA 1058
            LDL KA+LEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQH TPVEAGLTWAIGKRRRA
Sbjct: 243  LDLAKALLEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHTTPVEAGLTWAIGKRRRA 302

Query: 1059 EGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRTHCEILDGEGKSLGEVTSGGFSPCLKK 1238
            EGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPR+H EI D  G+++GE+TSGGFSPCLKK
Sbjct: 303  EGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRSHSEIQDSNGQNIGEITSGGFSPCLKK 362

Query: 1239 NIGMGYVKSGFHKAGTKVNVVIRGKSYDGVVTKMPFVPSKYYKP 1370
            NI MGYVK+G HKAGT V +VIRGKSYDGVVTKMPFVP+KYYKP
Sbjct: 363  NIAMGYVKTGNHKAGTNVKIVIRGKSYDGVVTKMPFVPTKYYKP 406


Top