BLASTX nr result
ID: Coptis23_contig00012139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00012139
(2219 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-... 400 e-109
emb|CBI25839.3| unnamed protein product [Vitis vinifera] 399 e-108
ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-... 395 e-107
ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-... 395 e-107
ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max] 363 1e-97
>ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-like [Vitis vinifera]
Length = 726
Score = 400 bits (1029), Expect = e-109
Identities = 234/510 (45%), Positives = 296/510 (58%), Gaps = 11/510 (2%)
Frame = +3
Query: 627 THRLAIVNMDWSQVRALDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 806
THRLA+VNM+W QV+A+DL++VLSSFLPK G +LSV +YPSEFGLKRMEEEAV GP+GLF
Sbjct: 186 THRLAVVNMEWRQVKAVDLFMVLSSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLF 245
Query: 807 XXXXXXXXXXXXXXIDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEFERSSN 986
ID EKLRAYE SRL YY+AV +CDSSATAD++YKACDG+EFERSSN
Sbjct: 246 DDEKEQSDDDGDNEIDDEKLRAYEKSRLSYYYAVVDCDSSATADYLYKACDGIEFERSSN 305
Query: 987 VLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR-KALRR 1163
VLDLRF+PD+M+F+ P D+ATE P Y +DF T+ALQ S I ++WDEDEP R K L+R
Sbjct: 306 VLDLRFIPDSMEFKHPPHDIATEAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLKR 365
Query: 1164 NFTDKQLDELDINDFIATXXXXXXXXXXXXXXXHDVAGEGQSGENLGKLEKYRALIQAXX 1343
+ D ++ EL + +F+A+ D + QS + + KY AL+++
Sbjct: 366 KYNDDEVAELAMKEFLAS--------DTDESETDDNENDDQSDKEHKRQNKYLALLESGD 417
Query: 1344 XXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEVVLRKRKEKKIARKNR-- 1517
MEVTFNTGLEDISK ILE K++KKSETVWE L+KR EK+ ARKNR
Sbjct: 418 GSDRDDEEDGQDMEVTFNTGLEDISKRILE-KREKKSETVWEAYLKKRSEKRKARKNRSK 476
Query: 1518 YXXXXXXXXXXXXXXXQPDDFFVEE----PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1685
Y QPDDFFVEE
Sbjct: 477 YSSEDESDDTDQELMEQPDDFFVEEHSAKGTKEVTQGKNDKKKKKLQQETGKEAEVSRAE 536
Query: 1686 XXXXXXXXXXXXPTMRGYKLXXXXXXXXXXXXXXXXXXXPAEDKLPSVACDDPRFSALFS 1865
+++GY L PA D DDPRFS+LF+
Sbjct: 537 LELLLADEEGADTSVKGYNLKRKKSKGRKGQEAPDEDKIPAVD------YDDPRFSSLFT 590
Query: 1866 SPLFALDPTDAQYKRSAAYTRQLA---QQKGVGEEILDKEQKKMPKEILLQSD-DTSKRD 2033
SPLFALDPTD Q+KRSA Y RQLA QQK G+ + KE K+ K+ SD + +D
Sbjct: 591 SPLFALDPTDPQFKRSATYARQLAQKQQQKSDGDALRGKEAMKLQKQTRPSSDGPEANKD 650
Query: 2034 ELMQSDSMSREKVNPELSSMIRSLKRKTQQ 2123
E + SD +S ++ ELSS++RS+K K++Q
Sbjct: 651 EPLMSDVLSSKREKHELSSLVRSIKTKSKQ 680
Score = 102 bits (253), Expect = 6e-19
Identities = 47/84 (55%), Positives = 64/84 (76%)
Frame = +3
Query: 60 QDKDIKNDGRKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHID 239
+D+ KN G K++ D RFS++H DPRFQ VPKH++KV IDSRFNRMF DK+F +SS+ +D
Sbjct: 26 EDRRSKNGG-KIVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFTSSSAPLD 84
Query: 240 KRGKRKDKNAVNPLRHYYNIDQQK 311
KRGK K + N L HYY +++Q+
Sbjct: 85 KRGKPKKDRSGNTLSHYYRLEEQE 108
>emb|CBI25839.3| unnamed protein product [Vitis vinifera]
Length = 738
Score = 399 bits (1026), Expect = e-108
Identities = 234/510 (45%), Positives = 295/510 (57%), Gaps = 11/510 (2%)
Frame = +3
Query: 627 THRLAIVNMDWSQVRALDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 806
THRLA+VNM+W QV+A+DL++VLSSFLPK G +LSV +YPSEFGLKRMEEEAV GP+GLF
Sbjct: 186 THRLAVVNMEWRQVKAVDLFMVLSSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLF 245
Query: 807 XXXXXXXXXXXXXXIDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEFERSSN 986
ID EKLRAYE SRL YY+AV +CDSSATAD++YKACDG+EFERSSN
Sbjct: 246 DDEKEQSDDDGDNEIDDEKLRAYEKSRLSYYYAVVDCDSSATADYLYKACDGIEFERSSN 305
Query: 987 VLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR-KALRR 1163
VLDLRF+PD+M+F+ P D+ATE P Y +DF T+ALQ S I ++WDEDEP R K L+R
Sbjct: 306 VLDLRFIPDSMEFKHPPHDIATEAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLKR 365
Query: 1164 NFTDKQLDELDINDFIATXXXXXXXXXXXXXXXHDVAGEGQSGENLGKLEKYRALIQAXX 1343
+ D + EL + +F+A+ D + QS + + KY AL+++
Sbjct: 366 KYNDDEQAELAMKEFLAS--------DTDESETDDNENDDQSDKEHKRQNKYLALLESGD 417
Query: 1344 XXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEVVLRKRKEKKIARKNR-- 1517
MEVTFNTGLEDISK ILE K++KKSETVWE L+KR EK+ ARKNR
Sbjct: 418 GSDRDDEEDGQDMEVTFNTGLEDISKRILE-KREKKSETVWEAYLKKRSEKRKARKNRSK 476
Query: 1518 YXXXXXXXXXXXXXXXQPDDFFVEE----PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1685
Y QPDDFFVEE
Sbjct: 477 YSSEDESDDTDQELMEQPDDFFVEEHSAKGTKEVTQGKNDKKKKKLQQETGKEAEVSRAE 536
Query: 1686 XXXXXXXXXXXXPTMRGYKLXXXXXXXXXXXXXXXXXXXPAEDKLPSVACDDPRFSALFS 1865
+++GY L PA D DDPRFS+LF+
Sbjct: 537 LELLLADEEGADTSVKGYNLKRKKSKGRKGQEAPDEDKIPAVD------YDDPRFSSLFT 590
Query: 1866 SPLFALDPTDAQYKRSAAYTRQLA---QQKGVGEEILDKEQKKMPKEILLQSD-DTSKRD 2033
SPLFALDPTD Q+KRSA Y RQLA QQK G+ + KE K+ K+ SD + +D
Sbjct: 591 SPLFALDPTDPQFKRSATYARQLAQKQQQKSDGDALRGKEAMKLQKQTRPSSDGPEANKD 650
Query: 2034 ELMQSDSMSREKVNPELSSMIRSLKRKTQQ 2123
E + SD +S ++ ELSS++RS+K K++Q
Sbjct: 651 EPLMSDVLSSKREKHELSSLVRSIKTKSKQ 680
Score = 102 bits (253), Expect = 6e-19
Identities = 47/84 (55%), Positives = 64/84 (76%)
Frame = +3
Query: 60 QDKDIKNDGRKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHID 239
+D+ KN G K++ D RFS++H DPRFQ VPKH++KV IDSRFNRMF DK+F +SS+ +D
Sbjct: 26 EDRRSKNGG-KIVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFTSSSAPLD 84
Query: 240 KRGKRKDKNAVNPLRHYYNIDQQK 311
KRGK K + N L HYY +++Q+
Sbjct: 85 KRGKPKKDRSGNTLSHYYRLEEQE 108
>ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
Length = 735
Score = 395 bits (1015), Expect = e-107
Identities = 237/512 (46%), Positives = 300/512 (58%), Gaps = 11/512 (2%)
Frame = +3
Query: 627 THRLAIVNMDWSQVRALDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 806
THRLA+VN+DW V+A+DLYVVLSSFLPKGGQ+LSV VYPSEFGL+RM+EE + GPVGLF
Sbjct: 206 THRLAVVNLDWRHVKAVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLF 265
Query: 807 XXXXXXXXXXXXXX-----IDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEF 971
+D EKLRAYE+SRLRYY+AV ECDS ATAD++YK CDG+EF
Sbjct: 266 DGEQKKNDEDDDDDNDDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVEF 325
Query: 972 ERSSNVLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR- 1148
ERSSN+LDLRF+PD+M+FE PRD ATE P +Y V++F T ALQ S I L+WDEDEP R
Sbjct: 326 ERSSNILDLRFIPDSMKFEHPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRV 385
Query: 1149 KALRRNFTDKQLDELDINDFIATXXXXXXXXXXXXXXXHDVAGEGQSGENLGKLEKYRAL 1328
KAL+R F QL +L++ +F+A+ GE Q + K +KYRAL
Sbjct: 386 KALKRKFNADQLADLELKEFLASDESESDDESDD--------GEDQVDKKRKKGDKYRAL 437
Query: 1329 IQAXXXXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEVVLRKRKEKKIAR 1508
+Q+ MEVTFNTGLEDISK ILE KKDKKSET+WE LRK+ EK++A
Sbjct: 438 LQS---DEDGEQDGGQDMEVTFNTGLEDISKRILE-KKDKKSETLWEAHLRKKHEKRMAS 493
Query: 1509 KNRYXXXXXXXXXXXXXXXQP-DDFFVEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1685
+N+ + DDFFVEEP
Sbjct: 494 RNKSANSSDDESSDTDREVEEVDDFFVEEPPVKESGKDRTKNIKGREHVGEDGAAEASRA 553
Query: 1686 XXXXXXXXXXXXPT-MRGYKLXXXXXXXXXXXXXXXXXXXPAEDKLPSVACDDPRFSALF 1862
T ++GY L EDK+P+V +DPRFSALF
Sbjct: 554 ELELLLADDDGVDTSIKGYNLKHKKKKGKEDI---------TEDKIPTVDYNDPRFSALF 604
Query: 1863 SSPLFALDPTDAQYKRSAAYTRQLA--QQKGVG-EEILDKEQKKMPKEILLQSDDTSKRD 2033
+SPLFALDPTD Q+KRSAAY RQ+A Q KG G + + K K+ +D SK D
Sbjct: 605 NSPLFALDPTDPQFKRSAAYVRQVALKQPKGDGYQPTKSRHGKSSTKQPAAPGEDESKGD 664
Query: 2034 ELMQSDSMSREKVNPELSSMIRSLKRKTQQYQ 2129
++++ S +K ELSS+++S+K K++Q Q
Sbjct: 665 VSVKTEGDSSKKEKYELSSLVKSIKMKSKQLQ 696
Score = 98.6 bits (244), Expect = 6e-18
Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = +3
Query: 72 IKNDG--RKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHIDKR 245
I ND +K+I D RFS+VH DPRFQN PKH++KV IDSRFN+MF DK F+++S+ +DKR
Sbjct: 31 INNDQSKKKIITDARFSSVHSDPRFQNAPKHKAKVVIDSRFNQMFKDKRFSSTSTALDKR 90
Query: 246 GKRKDKNAVNPLRHYYNIDQQ 308
G+ K + NPLR YY I+++
Sbjct: 91 GRVKKGKSENPLRRYYKIEEK 111
>ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
Length = 740
Score = 395 bits (1015), Expect = e-107
Identities = 237/512 (46%), Positives = 300/512 (58%), Gaps = 11/512 (2%)
Frame = +3
Query: 627 THRLAIVNMDWSQVRALDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 806
THRLA+VN+DW V+A+DLYVVLSSFLPKGGQ+LSV VYPSEFGL+RM+EE + GPVGLF
Sbjct: 211 THRLAVVNLDWRHVKAVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLF 270
Query: 807 XXXXXXXXXXXXXX-----IDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEF 971
+D EKLRAYE+SRLRYY+AV ECDS ATAD++YK CDG+EF
Sbjct: 271 DGEQKKNDEDDDDDNDDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVEF 330
Query: 972 ERSSNVLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR- 1148
ERSSN+LDLRF+PD+M+FE PRD ATE P +Y V++F T ALQ S I L+WDEDEP R
Sbjct: 331 ERSSNILDLRFIPDSMKFEHPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRV 390
Query: 1149 KALRRNFTDKQLDELDINDFIATXXXXXXXXXXXXXXXHDVAGEGQSGENLGKLEKYRAL 1328
KAL+R F QL +L++ +F+A+ GE Q + K +KYRAL
Sbjct: 391 KALKRKFNADQLADLELKEFLASDESESDDESDD--------GEDQVDKKRKKGDKYRAL 442
Query: 1329 IQAXXXXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEVVLRKRKEKKIAR 1508
+Q+ MEVTFNTGLEDISK ILE KKDKKSET+WE LRK+ EK++A
Sbjct: 443 LQS---DEDGEQDGGQDMEVTFNTGLEDISKRILE-KKDKKSETLWEAHLRKKHEKRMAS 498
Query: 1509 KNRYXXXXXXXXXXXXXXXQP-DDFFVEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1685
+N+ + DDFFVEEP
Sbjct: 499 RNKSADSSDDESSDTDREVEEVDDFFVEEPPVKESGKDRTKNIKGREHVGEDGAAEASRA 558
Query: 1686 XXXXXXXXXXXXPT-MRGYKLXXXXXXXXXXXXXXXXXXXPAEDKLPSVACDDPRFSALF 1862
T ++GY L EDK+P+V +DPRFSALF
Sbjct: 559 ELELLLADDDGVDTSIKGYNLKHKKKKGKEDI---------TEDKIPTVDYNDPRFSALF 609
Query: 1863 SSPLFALDPTDAQYKRSAAYTRQLA--QQKGVG-EEILDKEQKKMPKEILLQSDDTSKRD 2033
+SPLFALDPTD Q+KRSAAY RQ+A Q KG G + + K K+ +D SK D
Sbjct: 610 NSPLFALDPTDPQFKRSAAYVRQVALKQPKGDGYQPTKSRHGKSSTKQPAAPGEDESKGD 669
Query: 2034 ELMQSDSMSREKVNPELSSMIRSLKRKTQQYQ 2129
++++ S +K ELSS+++S+K K++Q Q
Sbjct: 670 VSVKTEGDSSKKEKYELSSLVKSIKMKSKQLQ 701
Score = 98.6 bits (244), Expect = 6e-18
Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = +3
Query: 72 IKNDG--RKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHIDKR 245
I ND +K+I D RFS+VH DPRFQN PKH++KV IDSRFN+MF DK F+++S+ +DKR
Sbjct: 35 INNDQSKKKIITDARFSSVHSDPRFQNAPKHKAKVVIDSRFNQMFKDKRFSSTSTALDKR 94
Query: 246 GKRKDKNAVNPLRHYYNIDQQ 308
G+ K + NPLR YY I+++
Sbjct: 95 GRVKKGKSENPLRRYYKIEEK 115
>ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]
Length = 695
Score = 363 bits (931), Expect = 1e-97
Identities = 221/518 (42%), Positives = 289/518 (55%), Gaps = 8/518 (1%)
Frame = +3
Query: 627 THRLAIVNMDWSQVRALDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 806
THR+A+VNMDW V+A+DLYV+LSSF+P G + SV VYPSEFGL+RM+EE V+GP+GLF
Sbjct: 182 THRVAVVNMDWRYVKAVDLYVLLSSFVPPNGLIKSVRVYPSEFGLQRMKEEEVRGPIGLF 241
Query: 807 XXXXXXXXXXXXXXIDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEFERSSN 986
+D EKLRAYE SR+RYY AV ECDSSATA++IYK CDGLE ++SSN
Sbjct: 242 DDEDSSNDD-----LDNEKLRAYEKSRMRYYFAVVECDSSATANYIYKECDGLELKQSSN 296
Query: 987 VLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR-KALRR 1163
LDLRF+PD M+F+ PRDVATEVP NY DF ++ALQ S + LTWD+DEP R K L R
Sbjct: 297 ALDLRFIPDNMEFKHPPRDVATEVPANYECKDFYSRALQHSEVNLTWDDDEPLRAKTLNR 356
Query: 1164 NFTDKQLDELDINDFIATXXXXXXXXXXXXXXXHDVAGEGQSGENLGKLEKYRALIQA-X 1340
TD+QL E ++ +F+ + + Q + K KYRAL+Q+
Sbjct: 357 KLTDEQLAEFEVKEFLTSDESESDDSKDNNET------DDQPDKMAKKRAKYRALLQSGD 410
Query: 1341 XXXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEVVLRKRKEKKIARKNR- 1517
MEVTFNTGLED+SK+I+E KKDKKSETVW+ L K+ EKK A KN+
Sbjct: 411 DSDGGNEHDNAQNMEVTFNTGLEDLSKYIME-KKDKKSETVWDAYLSKKSEKKKAGKNKR 469
Query: 1518 --YXXXXXXXXXXXXXXXQPDDFFVEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1691
+ DDFF+EEP
Sbjct: 470 KYSSDDDDSDDTDQEATEEADDFFIEEPAAKKRKKPQNKEDEEQRHEEIDGLDKASKEEL 529
Query: 1692 XXXXXXXXXXPT-MRGYKLXXXXXXXXXXXXXXXXXXXPAEDKLPSVACDDPRFSALFSS 1868
T ++GY L E+K+PS A +DPRFSALF S
Sbjct: 530 ELLLADDKGTDTGVKGYNLKFKKGKGKKRRENDID-----EEKIPSNAYNDPRFSALF-S 583
Query: 1869 PLFALDPTDAQYKRSAAYTRQLA--QQKGVGEEILDKEQKKMPKEILLQSDDTSKRDELM 2042
P +A+DPTD Q+KRSA Y RQLA QQK + +++E K+ L D +DE
Sbjct: 584 PNYAIDPTDPQFKRSATYARQLAQKQQKDNADPPVEREPTKLKGTQLSSEDSGRMKDEEE 643
Query: 2043 QSDSMSREKVNPELSSMIRSLKRKTQQYQATASTASKK 2156
D++ +K ELSS+++S+K K++Q Q + ++K
Sbjct: 644 GLDALKSKKDKYELSSLVKSIKMKSKQVQLPSDNKTRK 681
Score = 88.6 bits (218), Expect = 6e-15
Identities = 40/80 (50%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
Frame = +3
Query: 93 VIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHIDKRGKRKDK--N 266
+I DPR+S H DPRF+ PK ++KV +DSRFNRMF+ K+F SS+ +DKRGK K+ +
Sbjct: 36 LISDPRYSKAHTDPRFREAPKRETKVAVDSRFNRMFTHKSFLPSSAPVDKRGKPKNNPTS 95
Query: 267 AVNPLRHYYNIDQQKLQSHS 326
+ LRHYY ID+++++ S
Sbjct: 96 QLGSLRHYYKIDEKEVEQSS 115