BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012132
         (2133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS80150.1| ACT11D09.4 [Cucumis melo]                              294   7e-77
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi...   293   1e-76
ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containi...   278   5e-72
emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]   278   5e-72
emb|CBI29649.3| unnamed protein product [Vitis vinifera]              277   9e-72

>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
          Length = 896

 Score =  294 bits (752), Expect = 7e-77
 Identities = 191/482 (39%), Positives = 263/482 (54%), Gaps = 3/482 (0%)
 Frame = -2

Query: 1715 LGLNKVIMAVIDSGDLDAASNIARDAVARDAVTISNIVPTWLTCYNLLRSMFLAGRYEDG 1536
            L L+  + ++I +GDLDAAS++AR +V       SN  PT  TC  ++ +M+ A RY D 
Sbjct: 109  LNLHNRVQSLIRAGDLDAASSVARHSV------FSNTRPTVFTCNAIIAAMYRAKRYSDA 162

Query: 1535 VTLFDFFDNNKTIRNDYITIAIYNLLIKAHCDAGHVDKALQLYNYVLGXXXXXXXXXXXX 1356
            + LF FF N   I  + ++   YN LI AHCD G VD  L++Y +++             
Sbjct: 163  IALFQFFFNQSNIVPNVVS---YNNLINAHCDEGRVDVGLEVYRHIIANAPFSPSAVTYR 219

Query: 1355 XXXXXTKGLVSANRLSEAVDLLHQMRARDSNINNFALVYANLISGYLESDDLERANELFH 1176
                  KGL+ A R+ EAVDLL +M  +    ++  LV+ NLISG+L   +L +ANELF 
Sbjct: 220  HLT---KGLIDAGRIEEAVDLLREMLNKGHGADS--LVFNNLISGFLNLGNLVKANELFD 274

Query: 1175 EFIDNPGDRHCVKDGYVYASFMEYYLDHNMEKEAMELYKSLLNRQLVMLSAVYNELLNVL 996
            E      +R  V DG V A+FM+++ +   EKEAME YKSLL+RQ  M+ A  N LL VL
Sbjct: 275  EL----KERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVL 330

Query: 995  LKHGKFVEANTLFDSIFKQDTP--FHTSNSHTFNIMVNHWFGVGKVSEALSVFNIYRDEP 822
            LKH K  EA TLFD +    TP  F   NS TFNIMVN  F +GK +EA+  F     +P
Sbjct: 331  LKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFTEAVETFRKVGTQP 390

Query: 821  APMYGKLGPLYRDVVVHNNIIGKLFDTGMVAEAGELVDEVCSKLYFADVTTYTILFDAYF 642
                 K  P   DV  +NNII +  + GM+A+A     E+CSK    DV T+  L ++Y 
Sbjct: 391  -----KSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYL 445

Query: 641  KQERIRDVLKWFRHLV-LKTTFEPSFALVNSVFSRLINKGMIEEAGEILERMTQGGRQKP 465
            K E+I D L+ F  +V +      SF   N VF  LI  G   +  +IL +M   G + P
Sbjct: 446  KIEQIDDALRVFNRMVDVGLRVVASFG--NMVFGELIKNGKAADCAQILTKM---GERDP 500

Query: 464  FLVATSYELVLTESCKQGKLDLVQHLLGVMLLFNIGATPKLHGIVRDAFGKEDRVDQIES 285
                T Y++V+   C +G LD  + LL  ++ + IG TP L   V+DAF K  R ++IE 
Sbjct: 501  KPDPTCYDVVIRGLCNEGALDTSRELLDQIMRYGIGLTPTLEEFVKDAFVKAGRHEEIER 560

Query: 284  KL 279
             L
Sbjct: 561  LL 562


>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like
            [Cucumis sativus]
          Length = 871

 Score =  293 bits (751), Expect = 1e-76
 Identities = 191/482 (39%), Positives = 263/482 (54%), Gaps = 3/482 (0%)
 Frame = -2

Query: 1715 LGLNKVIMAVIDSGDLDAASNIARDAVARDAVTISNIVPTWLTCYNLLRSMFLAGRYEDG 1536
            L L+  + ++I +GDLDAAS++AR +V       SN  PT  TC  ++ +M+ A RY D 
Sbjct: 83   LNLHNRVQSLIRAGDLDAASSVARHSV------FSNTRPTVFTCNAIIAAMYRAKRYSDA 136

Query: 1535 VTLFDFFDNNKTIRNDYITIAIYNLLIKAHCDAGHVDKALQLYNYVLGXXXXXXXXXXXX 1356
            + LF FF N   I  + ++   YN LI AHCD G VD  L++Y +++             
Sbjct: 137  IALFQFFFNQSNIVPNVVS---YNNLINAHCDEGRVDVGLEVYRHIIANAPFSPSAVTYR 193

Query: 1355 XXXXXTKGLVSANRLSEAVDLLHQMRARDSNINNFALVYANLISGYLESDDLERANELFH 1176
                  KGL+ A R+ EAVDLL +M  +    ++  LV+ NLISG+L   +LE+ANELF 
Sbjct: 194  HLT---KGLIDAGRIEEAVDLLREMLNKGHGADS--LVFNNLISGFLNLGNLEKANELFD 248

Query: 1175 EFIDNPGDRHCVKDGYVYASFMEYYLDHNMEKEAMELYKSLLNRQLVMLSAVYNELLNVL 996
            E      +R  V DG V A+FM+++ +   EKEAME YKSLL+RQ  M+ A  N LL VL
Sbjct: 249  EL----KERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVL 304

Query: 995  LKHGKFVEANTLFDSIFKQDTP--FHTSNSHTFNIMVNHWFGVGKVSEALSVFNIYRDEP 822
            LKH K  EA TLFD +    TP  F   NS TFNIMVN  F  GK +EA+  F     +P
Sbjct: 305  LKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFAEAVETFRKVGTQP 364

Query: 821  APMYGKLGPLYRDVVVHNNIIGKLFDTGMVAEAGELVDEVCSKLYFADVTTYTILFDAYF 642
                 K  P   DV  +NNII +  + GM+A+A     E+CSK    DV T+  L ++Y 
Sbjct: 365  -----KSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYL 419

Query: 641  KQERIRDVLKWFRHLV-LKTTFEPSFALVNSVFSRLINKGMIEEAGEILERMTQGGRQKP 465
            K E+I D L+ F  +V +      SF   N VF  LI  G   +  +IL +M   G + P
Sbjct: 420  KIEQIDDALRVFNRMVDVGLRVVASFG--NMVFGELIKNGKAADCAQILTKM---GERDP 474

Query: 464  FLVATSYELVLTESCKQGKLDLVQHLLGVMLLFNIGATPKLHGIVRDAFGKEDRVDQIES 285
                T Y++V+   C +G LD  + LL  ++ + IG TP L   V++AF K  R ++IE 
Sbjct: 475  KPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLEEFVKEAFVKAGRHEEIER 534

Query: 284  KL 279
             L
Sbjct: 535  LL 536


>ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like
            [Vitis vinifera]
          Length = 627

 Score =  278 bits (710), Expect = 5e-72
 Identities = 185/508 (36%), Positives = 262/508 (51%), Gaps = 12/508 (2%)
 Frame = -2

Query: 1715 LGLNKVIMAVIDSGDLDAASNIARDAVARDAVTISNIVPTWLTCYNLLRSMFLAGRYEDG 1536
            L L+  + ++I +GDLD AS  AR +V       SN  PT  TC  ++ +M+   R++D 
Sbjct: 101  LNLHNRVQSLIRAGDLDLASATARQSV------FSNTRPTVFTCNAIIAAMYRNKRFDDA 154

Query: 1535 VTLFDFFDNNKTIRNDYITIAIYNLLIKAHCDAGHVDKALQLYNYVLGXXXXXXXXXXXX 1356
            + LF FF N   I  + ++   YN+LI  HCDAG VD  L +Y ++L             
Sbjct: 155  IALFQFFFNQSNIVPNIVS---YNVLINTHCDAGRVDVGLDIYRHILANAPFSPSPVTYR 211

Query: 1355 XXXXXTKGLVSANRLSEAVDLLHQMRARDSNINNFALVYANLISGYLESDDLERANELFH 1176
                  KGL+ + R+ EAVDLL +M  +    ++  LVY NLISG+L  ++  +A ELF 
Sbjct: 212  HLT---KGLIDSGRIGEAVDLLREMLNKGHGADS--LVYNNLISGFLNLENEAKAIELFD 266

Query: 1175 EFIDNPGDRHCVKDGYVYASFMEYYLDHNMEKEAMELYKSLLNRQLVMLSAVYNELLNVL 996
            E      +R  V DG V  +FM++Y     EK AM+ YKSLL+RQ  M     N LL VL
Sbjct: 267  EL----KERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLLDRQFRMTPVTCNALLEVL 322

Query: 995  LKHGKFVEANTLFDSIFKQDTP--FHTSNSHTFNIMVNHWFGVGKVSEALSVFNIYRDEP 822
            LKH K  EA  LFD +    TP  F   NS +F++MVN    +GK +EA+ VF     + 
Sbjct: 323  LKHDKKAEAWALFDQMLDNHTPPNFQAVNSDSFSVMVNECVKLGKFTEAIEVFKKVGKKQ 382

Query: 821  APMYGKLGPLYRDVVVHNNIIGKLFDTGMVAEAGELVDEVCSKLYFADVTTYTILFDAYF 642
                    P   DV  +NNII +  + G+++EA +L  E+ +K    DV  Y    +AYF
Sbjct: 383  GSK-----PFAMDVAGYNNIIARFCENGLLSEAEQLFGELSTKSLTPDVNIYRTFIEAYF 437

Query: 641  KQERIRDVLKWFRHLVLKTTFEPSFALVNSVFSRLINKGMIEEAGEILERMTQGGRQKPF 462
              ER  D L+ F   V  +      +  N VF  L+NKG   +AGE +  +T+ G + P 
Sbjct: 438  GMERADDALQMFNRFV-DSGLRVIVSFANKVFDELVNKG---KAGECVPVLTKMGEKDPK 493

Query: 461  LVATSYELVLTESCKQGKLDLVQHLLGVMLLFNIGATPKLHGIVRDAFGKEDRVDQIESK 282
               T+YE+V+   CK+   D  + L+G M+ +NIG TP L   V +AFGKE R ++IE  
Sbjct: 494  PDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVEAFGKEGRSEEIERL 553

Query: 281  L----------WQLTEPRYIWDFPRCAG 228
            L          W  + P  +   PR AG
Sbjct: 554  LEANRPGFGAYWPPSGPPRMAGPPRMAG 581


>emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]
          Length = 627

 Score =  278 bits (710), Expect = 5e-72
 Identities = 185/508 (36%), Positives = 262/508 (51%), Gaps = 12/508 (2%)
 Frame = -2

Query: 1715 LGLNKVIMAVIDSGDLDAASNIARDAVARDAVTISNIVPTWLTCYNLLRSMFLAGRYEDG 1536
            L L+  + ++I +GDLD AS  AR +V       SN  PT  TC  ++ +M+   R++D 
Sbjct: 101  LNLHNRVQSLIRAGDLDLASATARQSV------FSNTRPTVFTCNAIIAAMYRNKRFDDA 154

Query: 1535 VTLFDFFDNNKTIRNDYITIAIYNLLIKAHCDAGHVDKALQLYNYVLGXXXXXXXXXXXX 1356
            + LF FF N   I  + ++   YN+LI  HCDAG VD  L +Y ++L             
Sbjct: 155  IALFQFFFNQSNIVPNIVS---YNVLINTHCDAGRVDVGLDIYRHILANAPFSPSPVTYR 211

Query: 1355 XXXXXTKGLVSANRLSEAVDLLHQMRARDSNINNFALVYANLISGYLESDDLERANELFH 1176
                  KGL+ + R+ EAVDLL +M  +    ++  LVY NLISG+L  ++  +A ELF 
Sbjct: 212  HLT---KGLIDSGRIGEAVDLLREMLNKGHGADS--LVYNNLISGFLNLENEAKAIELFD 266

Query: 1175 EFIDNPGDRHCVKDGYVYASFMEYYLDHNMEKEAMELYKSLLNRQLVMLSAVYNELLNVL 996
            E      +R  V DG V  +FM++Y     EK AM+ YKSLL+RQ  M     N LL VL
Sbjct: 267  EL----KERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLLDRQFRMTPVTCNALLEVL 322

Query: 995  LKHGKFVEANTLFDSIFKQDTP--FHTSNSHTFNIMVNHWFGVGKVSEALSVFNIYRDEP 822
            LKH K  EA  LFD +    TP  F   NS +F++MVN    +GK +EA+ VF     + 
Sbjct: 323  LKHDKKAEAWALFDQMLDNHTPPNFQAVNSDSFSVMVNECVKLGKFTEAIEVFKKVGKKQ 382

Query: 821  APMYGKLGPLYRDVVVHNNIIGKLFDTGMVAEAGELVDEVCSKLYFADVTTYTILFDAYF 642
                    P   DV  +NNII +  + G+++EA +L  E+ +K    DV  Y    +AYF
Sbjct: 383  GSK-----PFAMDVAGYNNIIARFCENGLLSEAEQLFGELSTKSLTPDVNIYRTFIEAYF 437

Query: 641  KQERIRDVLKWFRHLVLKTTFEPSFALVNSVFSRLINKGMIEEAGEILERMTQGGRQKPF 462
              ER  D L+ F   V  +      +  N VF  L+NKG   +AGE +  +T+ G + P 
Sbjct: 438  GMERADDALQMFNRFV-DSGLRVIVSFANKVFDELVNKG---KAGECVPVLTKMGEKDPK 493

Query: 461  LVATSYELVLTESCKQGKLDLVQHLLGVMLLFNIGATPKLHGIVRDAFGKEDRVDQIESK 282
               T+YE+V+   CK+   D  + L+G M+ +NIG TP L   V +AFGKE R ++IE  
Sbjct: 494  PDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVEAFGKEGRSEEIERL 553

Query: 281  L----------WQLTEPRYIWDFPRCAG 228
            L          W  + P  +   PR AG
Sbjct: 554  LEANRPGFGAYWPPSGPPRMAGPPRMAG 581


>emb|CBI29649.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  277 bits (708), Expect = 9e-72
 Identities = 179/481 (37%), Positives = 254/481 (52%), Gaps = 2/481 (0%)
 Frame = -2

Query: 1715 LGLNKVIMAVIDSGDLDAASNIARDAVARDAVTISNIVPTWLTCYNLLRSMFLAGRYEDG 1536
            L L+  + ++I +GDLD AS  AR +V       SN  PT  TC  ++ +M+   R++D 
Sbjct: 101  LNLHNRVQSLIRAGDLDLASATARQSV------FSNTRPTVFTCNAIIAAMYRNKRFDDA 154

Query: 1535 VTLFDFFDNNKTIRNDYITIAIYNLLIKAHCDAGHVDKALQLYNYVLGXXXXXXXXXXXX 1356
            + LF FF N   I  + ++   YN+LI  HCDAG VD  L +Y ++L             
Sbjct: 155  IALFQFFFNQSNIVPNIVS---YNVLINTHCDAGRVDVGLDIYRHILANAPFSPSPVTYR 211

Query: 1355 XXXXXTKGLVSANRLSEAVDLLHQMRARDSNINNFALVYANLISGYLESDDLERANELFH 1176
                  KGL+ + R+ EAVDLL +M  +    ++  LVY NLISG+L  ++  +A ELF 
Sbjct: 212  HLT---KGLIDSGRIGEAVDLLREMLNKGHGADS--LVYNNLISGFLNLENEAKAIELFD 266

Query: 1175 EFIDNPGDRHCVKDGYVYASFMEYYLDHNMEKEAMELYKSLLNRQLVMLSAVYNELLNVL 996
            E      +R  V DG V  +FM++Y     EK AM+ YKSLL+RQ  M     N LL VL
Sbjct: 267  EL----KERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLLDRQFRMTPVTCNALLEVL 322

Query: 995  LKHGKFVEANTLFDSIFKQDTP--FHTSNSHTFNIMVNHWFGVGKVSEALSVFNIYRDEP 822
            LKH K  EA  LFD +    TP  F   NS +F++MVN    +GK +EA+ VF     + 
Sbjct: 323  LKHDKKAEAWALFDQMLDNHTPPNFQAVNSDSFSVMVNECVKLGKFTEAIEVFKKVGKKQ 382

Query: 821  APMYGKLGPLYRDVVVHNNIIGKLFDTGMVAEAGELVDEVCSKLYFADVTTYTILFDAYF 642
                    P   DV  +NNII +  + G+++EA +L  E+ +K    DV  Y    +AYF
Sbjct: 383  GSK-----PFAMDVAGYNNIIARFCENGLLSEAEQLFGELSTKSLTPDVNIYRTFIEAYF 437

Query: 641  KQERIRDVLKWFRHLVLKTTFEPSFALVNSVFSRLINKGMIEEAGEILERMTQGGRQKPF 462
              ER  D L+ F   V  +      +  N VF  L+NKG   +AGE +  +T+ G + P 
Sbjct: 438  GMERADDALQMFNRFV-DSGLRVIVSFANKVFDELVNKG---KAGECVPVLTKMGEKDPK 493

Query: 461  LVATSYELVLTESCKQGKLDLVQHLLGVMLLFNIGATPKLHGIVRDAFGKEDRVDQIESK 282
               T+YE+V+   CK+   D  + L+G M+ +NIG TP L   V +AFGKE R ++IE  
Sbjct: 494  PDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVEAFGKEGRSEEIERL 553

Query: 281  L 279
            L
Sbjct: 554  L 554