BLASTX nr result

ID: Coptis23_contig00012124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012124
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530836.1| conserved hypothetical protein [Ricinus comm...   289   6e-76
ref|XP_002263460.1| PREDICTED: uncharacterized protein LOC100242...   286   4e-75
ref|XP_004140187.1| PREDICTED: uncharacterized protein LOC101204...   260   4e-67
ref|XP_003532877.1| PREDICTED: uncharacterized protein LOC100775...   259   9e-67
emb|CBI24277.3| unnamed protein product [Vitis vinifera]              258   1e-66

>ref|XP_002530836.1| conserved hypothetical protein [Ricinus communis]
           gi|223529600|gb|EEF31549.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 280

 Score =  289 bits (740), Expect = 6e-76
 Identities = 142/210 (67%), Positives = 164/210 (78%), Gaps = 1/210 (0%)
 Frame = -3

Query: 995 ELKEKWLASLSCPLPEKVEELGSEVRSNG-SGAGLNWVIGIDPDVSGALALLKTDESGCS 819
           +LKE WL SLSCP  +        V S   S  G NWVIGIDPD+SGALALLK D+SGCS
Sbjct: 69  QLKENWLHSLSCPFNQTESSASKGVDSTAPSNVGSNWVIGIDPDLSGALALLKIDDSGCS 128

Query: 818 AQVFDNPHVQILVGKRVRRRLDANSIVQMLQSFNAPLGTTAYLEQSIPFPQDGKQGWWSG 639
           AQVFD+PH+++LVGKR+R+RLDA SIVQ+L SF+APLGTTAY+EQSIPFPQDGKQGWWSG
Sbjct: 129 AQVFDSPHLKVLVGKRIRKRLDAKSIVQLLHSFDAPLGTTAYIEQSIPFPQDGKQGWWSG 188

Query: 638 GFGYGMWIGSLVASGFSVVPVTSLLWKNHFQLSGSRLTKDDSRXXXXXXXXXXXXXXTRK 459
           GFGYG+WIG LVASGFSVVPV SL WKN F+LSGS+ +KDDSR               RK
Sbjct: 189 GFGYGLWIGILVASGFSVVPVPSLAWKNVFELSGSKFSKDDSRKVASTLFPSLSSLLKRK 248

Query: 458 KDHGRAEALLIAAYGKGLQLKLDSALEINQ 369
           KDHGRAEALLIAAYGKGL+LK D+  ++ +
Sbjct: 249 KDHGRAEALLIAAYGKGLKLKPDTPCDLEE 278


>ref|XP_002263460.1| PREDICTED: uncharacterized protein LOC100242692 isoform 1 [Vitis
            vinifera]
          Length = 291

 Score =  286 bits (733), Expect = 4e-75
 Identities = 140/204 (68%), Positives = 162/204 (79%)
 Frame = -3

Query: 1001 DAELKEKWLASLSCPLPEKVEELGSEVRSNGSGAGLNWVIGIDPDVSGALALLKTDESGC 822
            D + +E WLASLSCP P++ E  G  + S  S AG   VIGIDPD+SGALALLKT +SGC
Sbjct: 74   DTQYRENWLASLSCPFPDENERPGIRMDSAESNAGTQCVIGIDPDISGALALLKTGDSGC 133

Query: 821  SAQVFDNPHVQILVGKRVRRRLDANSIVQMLQSFNAPLGTTAYLEQSIPFPQDGKQGWWS 642
            SAQVFD+PH+QILVGKRVR+RLDA SIVQ+L+ F+AP+GT AY+EQSIPFPQDGKQGWWS
Sbjct: 134  SAQVFDSPHLQILVGKRVRKRLDAKSIVQLLRGFDAPIGTIAYIEQSIPFPQDGKQGWWS 193

Query: 641  GGFGYGMWIGSLVASGFSVVPVTSLLWKNHFQLSGSRLTKDDSRXXXXXXXXXXXXXXTR 462
            GGFGYG+WIG LVASGFSVVPV S LWKN F+LSG+  +KDDSR               R
Sbjct: 194  GGFGYGLWIGILVASGFSVVPVPSSLWKNEFKLSGNGTSKDDSRRVASTIFPSMSSLLKR 253

Query: 461  KKDHGRAEALLIAAYGKGLQLKLD 390
            KKDHGRAEALLIAA+GKGL++K D
Sbjct: 254  KKDHGRAEALLIAAFGKGLKMKSD 277


>ref|XP_004140187.1| PREDICTED: uncharacterized protein LOC101204284 [Cucumis sativus]
           gi|449481000|ref|XP_004156052.1| PREDICTED:
           uncharacterized LOC101204284 [Cucumis sativus]
          Length = 273

 Score =  260 bits (664), Expect = 4e-67
 Identities = 135/210 (64%), Positives = 153/210 (72%), Gaps = 4/210 (1%)
 Frame = -3

Query: 998 AELKEKWLASLSCPLPEKVEELGSEVRSNGSGAGLN----WVIGIDPDVSGALALLKTDE 831
           A+LK+ WLASLSCP P     LG +  SN S    N     VIG+DPDVSGA+ALL+TDE
Sbjct: 68  AQLKDNWLASLSCPFP-----LGHDYSSNSSSPDRNAASECVIGVDPDVSGAVALLRTDE 122

Query: 830 SGCSAQVFDNPHVQILVGKRVRRRLDANSIVQMLQSFNAPLGTTAYLEQSIPFPQDGKQG 651
           S  SAQV+D+PHVQILVG R R+RLDA SIVQ+L SFNAP+GTTAYLEQS PFP+DGKQG
Sbjct: 123 SISSAQVYDSPHVQILVGGRKRKRLDAKSIVQLLHSFNAPIGTTAYLEQSNPFPKDGKQG 182

Query: 650 WWSGGFGYGMWIGSLVASGFSVVPVTSLLWKNHFQLSGSRLTKDDSRXXXXXXXXXXXXX 471
           WW GGFGYG+WIG LV  GFSVVPV  L WKN F+LSG   +KDDSR             
Sbjct: 183 WWGGGFGYGLWIGVLVGLGFSVVPVPPLAWKNKFELSGKDTSKDDSRRIASELFPSLTPL 242

Query: 470 XTRKKDHGRAEALLIAAYGKGLQLKLDSAL 381
             RKKDHGRA+ALLIAAYGKGL+L   + L
Sbjct: 243 LKRKKDHGRADALLIAAYGKGLKLNSKTPL 272


>ref|XP_003532877.1| PREDICTED: uncharacterized protein LOC100775189 [Glycine max]
          Length = 274

 Score =  259 bits (661), Expect = 9e-67
 Identities = 127/199 (63%), Positives = 149/199 (74%), Gaps = 2/199 (1%)
 Frame = -3

Query: 1001 DAELKEKWLASLSCPLPEKVEELGSEVRSNGSGAGLNWVIGIDPDVSGALALLKTDESGC 822
            D + KE WLASLS P PEK   L  E        G  WV+GIDPDVSGA+ALLKT  S C
Sbjct: 56   DTQFKENWLASLSYPFPEKTHLLSGEHEPTHQNDGSKWVLGIDPDVSGAVALLKTHGSVC 115

Query: 821  SAQVFDNPHVQILVGK--RVRRRLDANSIVQMLQSFNAPLGTTAYLEQSIPFPQDGKQGW 648
            SAQVFD+PHV+ILVGK  R RRRLDA S+V++++ F+AP+GTTA++EQS+P+PQDGKQGW
Sbjct: 116  SAQVFDSPHVKILVGKNKRTRRRLDAKSVVELVRGFDAPIGTTAFIEQSLPYPQDGKQGW 175

Query: 647  WSGGFGYGMWIGSLVASGFSVVPVTSLLWKNHFQLSGSRLTKDDSRXXXXXXXXXXXXXX 468
            WSGGFGYG+WIG LVASGFSV+PV S  WK  F+LSG+  TKDDSR              
Sbjct: 176  WSGGFGYGLWIGILVASGFSVIPVPSFTWKAKFELSGNGTTKDDSRRIASTLFPSMTSML 235

Query: 467  TRKKDHGRAEALLIAAYGK 411
            +RKKDHGRAEALLIAAYG+
Sbjct: 236  SRKKDHGRAEALLIAAYGQ 254


>emb|CBI24277.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score =  258 bits (660), Expect = 1e-66
 Identities = 126/173 (72%), Positives = 143/173 (82%)
 Frame = -3

Query: 908 SGAGLNWVIGIDPDVSGALALLKTDESGCSAQVFDNPHVQILVGKRVRRRLDANSIVQML 729
           S AG   VIGIDPD+SGALALLKT +SGCSAQVFD+PH+QILVGKRVR+RLDA SIVQ+L
Sbjct: 6   SNAGTQCVIGIDPDISGALALLKTGDSGCSAQVFDSPHLQILVGKRVRKRLDAKSIVQLL 65

Query: 728 QSFNAPLGTTAYLEQSIPFPQDGKQGWWSGGFGYGMWIGSLVASGFSVVPVTSLLWKNHF 549
           + F+AP+GT AY+EQSIPFPQDGKQGWWSGGFGYG+WIG LVASGFSVVPV S LWKN F
Sbjct: 66  RGFDAPIGTIAYIEQSIPFPQDGKQGWWSGGFGYGLWIGILVASGFSVVPVPSSLWKNEF 125

Query: 548 QLSGSRLTKDDSRXXXXXXXXXXXXXXTRKKDHGRAEALLIAAYGKGLQLKLD 390
           +LSG+  +KDDSR               RKKDHGRAEALLIAA+GKGL++K D
Sbjct: 126 KLSGNGTSKDDSRRVASTIFPSMSSLLKRKKDHGRAEALLIAAFGKGLKMKSD 178


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