BLASTX nr result

ID: Coptis23_contig00012121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012121
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315377.1| predicted protein [Populus trichocarpa] gi|2...   138   9e-31
ref|XP_002311905.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
emb|CAN68359.1| hypothetical protein VITISV_029196 [Vitis vinifera]   133   3e-29
ref|XP_002264976.1| PREDICTED: F-box/kelch-repeat protein At1g51...   129   5e-28
ref|XP_002518834.1| ubiquitin-protein ligase, putative [Ricinus ...   122   5e-26

>ref|XP_002315377.1| predicted protein [Populus trichocarpa] gi|222864417|gb|EEF01548.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  138 bits (348), Expect = 9e-31
 Identities = 67/108 (62%), Positives = 84/108 (77%)
 Frame = +1

Query: 355 TCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSSQDMRHQQLSWRKLYQKISQL 534
           TCKRF+SL  S+TLW+SICRR+WG    +VDA+  S ++  +   QQL W +LY+++SQL
Sbjct: 45  TCKRFRSLTSSDTLWESICRREWGS--TSVDALKSSINTKNN---QQLPWMRLYKQVSQL 99

Query: 535 GSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGYEGGRHLDD 678
            SV+C +L+  D  L+LPTPRASHCLNFVSDCLVLFGGG EGGR LDD
Sbjct: 100 DSVSCHKLSDPDSELMLPTPRASHCLNFVSDCLVLFGGGCEGGRDLDD 147


>ref|XP_002311905.1| predicted protein [Populus trichocarpa] gi|222851725|gb|EEE89272.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score =  134 bits (336), Expect = 2e-29
 Identities = 66/109 (60%), Positives = 83/109 (76%)
 Frame = +1

Query: 352 MTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSSQDMRHQQLSWRKLYQKISQ 531
           MTCKRF+SL  S+TLW+SICRR+WG    +VDA   S +++ +   QQL W +LY+++SQ
Sbjct: 49  MTCKRFRSLTTSDTLWESICRREWGS--TSVDAFKSSINTNNN---QQLPWMRLYKQVSQ 103

Query: 532 LGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGYEGGRHLDD 678
           L S +C +L   D +L+LPTPRASH LNFVSDCLVLFGGG EGGR LDD
Sbjct: 104 LDSFSCHKLPDPDSDLMLPTPRASHSLNFVSDCLVLFGGGREGGRDLDD 152


>emb|CAN68359.1| hypothetical protein VITISV_029196 [Vitis vinifera]
          Length = 473

 Score =  133 bits (335), Expect = 3e-29
 Identities = 65/109 (59%), Positives = 82/109 (75%)
 Frame = +1

Query: 352 MTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSSQDMRHQQLSWRKLYQKISQ 531
           MTC RF+SL +SE+LW++ICRRDWG     VDA+  S  ++     QQLSW +LY+++ Q
Sbjct: 51  MTCSRFRSLTFSESLWEAICRRDWGP--TTVDALKFSAEATNCQ--QQLSWMRLYKQVCQ 106

Query: 532 LGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGYEGGRHLDD 678
           L SV+C RL+  D  ++LP PRASH LNFVSDCLVLFGGG EGGRH+DD
Sbjct: 107 LDSVSCHRLSGPDAGMVLPKPRASHSLNFVSDCLVLFGGGSEGGRHIDD 155


>ref|XP_002264976.1| PREDICTED: F-box/kelch-repeat protein At1g51550 [Vitis vinifera]
           gi|297735772|emb|CBI18459.3| unnamed protein product
           [Vitis vinifera]
          Length = 473

 Score =  129 bits (324), Expect = 5e-28
 Identities = 64/109 (58%), Positives = 81/109 (74%)
 Frame = +1

Query: 352 MTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSSQDMRHQQLSWRKLYQKISQ 531
           MTC RF+SL +SE+LW++ICRRDWG     VDA+  S  ++     QQLSW +LY+++ Q
Sbjct: 51  MTCSRFRSLTFSESLWEAICRRDWGP--TTVDALKFSAEATNCQ--QQLSWMRLYKQVCQ 106

Query: 532 LGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGYEGGRHLDD 678
           L SV+C RL+  D  ++LP PRAS  LNFVSDCLVLFGGG EGGRH+DD
Sbjct: 107 LDSVSCHRLSGPDAGMVLPKPRASLSLNFVSDCLVLFGGGSEGGRHIDD 155


>ref|XP_002518834.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542007|gb|EEF43552.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 462

 Score =  122 bits (307), Expect = 5e-26
 Identities = 59/109 (54%), Positives = 78/109 (71%)
 Frame = +1

Query: 352 MTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSSQDMRHQQLSWRKLYQKISQ 531
           MTCKRF SL  S+ LW+SIC+RDWG    +VDA+          ++Q   W +LY+++S 
Sbjct: 54  MTCKRFTSLTSSDALWESICKRDWGP--TSVDAL----------KNQHFPWMRLYKQVSL 101

Query: 532 LGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGYEGGRHLDD 678
           L +++C +L+  D + LLP+PRASH LNF+SDCLVLFGGG EGGRHLDD
Sbjct: 102 LDTISCHKLSDPDTDSLLPSPRASHSLNFISDCLVLFGGGCEGGRHLDD 150


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