BLASTX nr result
ID: Coptis23_contig00012121
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00012121 (681 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315377.1| predicted protein [Populus trichocarpa] gi|2... 138 9e-31 ref|XP_002311905.1| predicted protein [Populus trichocarpa] gi|2... 134 2e-29 emb|CAN68359.1| hypothetical protein VITISV_029196 [Vitis vinifera] 133 3e-29 ref|XP_002264976.1| PREDICTED: F-box/kelch-repeat protein At1g51... 129 5e-28 ref|XP_002518834.1| ubiquitin-protein ligase, putative [Ricinus ... 122 5e-26 >ref|XP_002315377.1| predicted protein [Populus trichocarpa] gi|222864417|gb|EEF01548.1| predicted protein [Populus trichocarpa] Length = 469 Score = 138 bits (348), Expect = 9e-31 Identities = 67/108 (62%), Positives = 84/108 (77%) Frame = +1 Query: 355 TCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSSQDMRHQQLSWRKLYQKISQL 534 TCKRF+SL S+TLW+SICRR+WG +VDA+ S ++ + QQL W +LY+++SQL Sbjct: 45 TCKRFRSLTSSDTLWESICRREWGS--TSVDALKSSINTKNN---QQLPWMRLYKQVSQL 99 Query: 535 GSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGYEGGRHLDD 678 SV+C +L+ D L+LPTPRASHCLNFVSDCLVLFGGG EGGR LDD Sbjct: 100 DSVSCHKLSDPDSELMLPTPRASHCLNFVSDCLVLFGGGCEGGRDLDD 147 >ref|XP_002311905.1| predicted protein [Populus trichocarpa] gi|222851725|gb|EEE89272.1| predicted protein [Populus trichocarpa] Length = 475 Score = 134 bits (336), Expect = 2e-29 Identities = 66/109 (60%), Positives = 83/109 (76%) Frame = +1 Query: 352 MTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSSQDMRHQQLSWRKLYQKISQ 531 MTCKRF+SL S+TLW+SICRR+WG +VDA S +++ + QQL W +LY+++SQ Sbjct: 49 MTCKRFRSLTTSDTLWESICRREWGS--TSVDAFKSSINTNNN---QQLPWMRLYKQVSQ 103 Query: 532 LGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGYEGGRHLDD 678 L S +C +L D +L+LPTPRASH LNFVSDCLVLFGGG EGGR LDD Sbjct: 104 LDSFSCHKLPDPDSDLMLPTPRASHSLNFVSDCLVLFGGGREGGRDLDD 152 >emb|CAN68359.1| hypothetical protein VITISV_029196 [Vitis vinifera] Length = 473 Score = 133 bits (335), Expect = 3e-29 Identities = 65/109 (59%), Positives = 82/109 (75%) Frame = +1 Query: 352 MTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSSQDMRHQQLSWRKLYQKISQ 531 MTC RF+SL +SE+LW++ICRRDWG VDA+ S ++ QQLSW +LY+++ Q Sbjct: 51 MTCSRFRSLTFSESLWEAICRRDWGP--TTVDALKFSAEATNCQ--QQLSWMRLYKQVCQ 106 Query: 532 LGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGYEGGRHLDD 678 L SV+C RL+ D ++LP PRASH LNFVSDCLVLFGGG EGGRH+DD Sbjct: 107 LDSVSCHRLSGPDAGMVLPKPRASHSLNFVSDCLVLFGGGSEGGRHIDD 155 >ref|XP_002264976.1| PREDICTED: F-box/kelch-repeat protein At1g51550 [Vitis vinifera] gi|297735772|emb|CBI18459.3| unnamed protein product [Vitis vinifera] Length = 473 Score = 129 bits (324), Expect = 5e-28 Identities = 64/109 (58%), Positives = 81/109 (74%) Frame = +1 Query: 352 MTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSSQDMRHQQLSWRKLYQKISQ 531 MTC RF+SL +SE+LW++ICRRDWG VDA+ S ++ QQLSW +LY+++ Q Sbjct: 51 MTCSRFRSLTFSESLWEAICRRDWGP--TTVDALKFSAEATNCQ--QQLSWMRLYKQVCQ 106 Query: 532 LGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGYEGGRHLDD 678 L SV+C RL+ D ++LP PRAS LNFVSDCLVLFGGG EGGRH+DD Sbjct: 107 LDSVSCHRLSGPDAGMVLPKPRASLSLNFVSDCLVLFGGGSEGGRHIDD 155 >ref|XP_002518834.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223542007|gb|EEF43552.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 462 Score = 122 bits (307), Expect = 5e-26 Identities = 59/109 (54%), Positives = 78/109 (71%) Frame = +1 Query: 352 MTCKRFKSLAYSETLWKSICRRDWGIFFVNVDAILGSCSSSQDMRHQQLSWRKLYQKISQ 531 MTCKRF SL S+ LW+SIC+RDWG +VDA+ ++Q W +LY+++S Sbjct: 54 MTCKRFTSLTSSDALWESICKRDWGP--TSVDAL----------KNQHFPWMRLYKQVSL 101 Query: 532 LGSVNCLRLAVVDDNLLLPTPRASHCLNFVSDCLVLFGGGYEGGRHLDD 678 L +++C +L+ D + LLP+PRASH LNF+SDCLVLFGGG EGGRHLDD Sbjct: 102 LDTISCHKLSDPDTDSLLPSPRASHSLNFISDCLVLFGGGCEGGRHLDD 150