BLASTX nr result

ID: Coptis23_contig00012114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012114
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19258.3| unnamed protein product [Vitis vinifera]              110   3e-22
ref|XP_002283873.1| PREDICTED: uncharacterized protein LOC100250...   110   3e-22
emb|CAN74018.1| hypothetical protein VITISV_003555 [Vitis vinifera]    98   2e-18
gb|AFK48621.1| unknown [Lotus japonicus]                               91   2e-16
ref|XP_003522747.1| PREDICTED: uncharacterized protein LOC100787...    91   3e-16

>emb|CBI19258.3| unnamed protein product [Vitis vinifera]
          Length = 378

 Score =  110 bits (274), Expect = 3e-22
 Identities = 63/134 (47%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
 Frame = -3

Query: 473 MRSNRLENSKKHFSKVAVKDSRVVKSSEGST-SGDLVWIRLRGSLWWPAQVVDENMXXXX 297
           M+  RL +SK H  K   ++ +      G    GDL+W+RLRG  WWPAQVV+EN     
Sbjct: 1   MKGKRLASSKSHVVKE--EEEKAADQLRGKVLPGDLIWVRLRGLSWWPAQVVNENAVSRS 58

Query: 296 XXXXXXXPGGVLVRVYGTYTYLYRDLLKYRTEFKKILKQNDGSYLETFKKALEQDLSHRK 117
                     VLVRVYGTY YLY D +K R+EF+ ILKQN+ SY E F+KALEQDL   K
Sbjct: 59  NKPGNRSEDEVLVRVYGTYNYLYVDPMKCRSEFENILKQNNCSYREIFQKALEQDLPSAK 118

Query: 116 RTTSKRTICESGEA 75
              SK    +S E+
Sbjct: 119 CGRSKGRGSKSKES 132


>ref|XP_002283873.1| PREDICTED: uncharacterized protein LOC100250519 [Vitis vinifera]
          Length = 553

 Score =  110 bits (274), Expect = 3e-22
 Identities = 63/134 (47%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
 Frame = -3

Query: 473 MRSNRLENSKKHFSKVAVKDSRVVKSSEGST-SGDLVWIRLRGSLWWPAQVVDENMXXXX 297
           M+  RL +SK H  K   ++ +      G    GDL+W+RLRG  WWPAQVV+EN     
Sbjct: 1   MKGKRLASSKSHVVKE--EEEKAADQLRGKVLPGDLIWVRLRGLSWWPAQVVNENAVSRS 58

Query: 296 XXXXXXXPGGVLVRVYGTYTYLYRDLLKYRTEFKKILKQNDGSYLETFKKALEQDLSHRK 117
                     VLVRVYGTY YLY D +K R+EF+ ILKQN+ SY E F+KALEQDL   K
Sbjct: 59  NKPGNRSEDEVLVRVYGTYNYLYVDPMKCRSEFENILKQNNCSYREIFQKALEQDLPSAK 118

Query: 116 RTTSKRTICESGEA 75
              SK    +S E+
Sbjct: 119 CGRSKGRGSKSKES 132


>emb|CAN74018.1| hypothetical protein VITISV_003555 [Vitis vinifera]
          Length = 398

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 61/143 (42%), Positives = 74/143 (51%), Gaps = 19/143 (13%)
 Frame = -3

Query: 473 MRSNRLENSKKHFSKVAVKDSRVVKSSEGST-SGDLVWIRLRGSLWWPAQVVDENMXXXX 297
           M+  RL +SK H  K   ++ +      G    GDL+W+RLRG  WWPAQVV+EN     
Sbjct: 1   MKGKRLASSKSHVVKE--EEEKAADQLRGKVLPGDLIWVRLRGLSWWPAQVVNENAVSRS 58

Query: 296 XXXXXXXPGGVLVRVYGTYTYLYRDLLKYRTEFK------------------KILKQNDG 171
                     VLVRVYGTY YLY D  K R+EF+                  +ILKQN+ 
Sbjct: 59  NKPGNRSEDEVLVRVYGTYNYLYVDPXKCRSEFENLLRTYHLLVSKIISLKSQILKQNNC 118

Query: 170 SYLETFKKALEQDLSHRKRTTSK 102
           SY E F+KALEQDL   K   SK
Sbjct: 119 SYREIFQKALEQDLPSAKCGRSK 141


>gb|AFK48621.1| unknown [Lotus japonicus]
          Length = 160

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 44/121 (36%), Positives = 72/121 (59%)
 Frame = -3

Query: 377 GDLVWIRLRGSLWWPAQVVDENMXXXXXXXXXXXPGGVLVRVYGTYTYLYRDLLKYRTEF 198
           GD+++++L GS WWP QVVD+N               VLVR+YG+YTYLY D  K R+EF
Sbjct: 33  GDVIYVKLHGSSWWPGQVVDDNSVSESVKPSKRSAREVLVRLYGSYTYLYADPAKSRSEF 92

Query: 197 KKILKQNDGSYLETFKKALEQDLSHRKRTTSKRTICESGEAVAATPTDEKSKHDTNKNNE 18
           ++ILK N+GS+ +   ++LE+DL   K + ++ +  ++      +PT ++ K + +    
Sbjct: 93  EEILKLNNGSHQQILLQSLEKDLPSTKSSRAEGSSSKTKGTPRRSPTSKRQKQNDDDLGR 152

Query: 17  Q 15
           Q
Sbjct: 153 Q 153


>ref|XP_003522747.1| PREDICTED: uncharacterized protein LOC100787568 [Glycine max]
          Length = 208

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 55/155 (35%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
 Frame = -3

Query: 455 ENSKKHFSKVAVKDSRVVKSSEGSTSGDLVWIRLRGSLWWPAQVVDENMXXXXXXXXXXX 276
           ++ K   S+    DS  V        GD+++++LRGS WWP QVVDEN            
Sbjct: 6   KSGKSEISEGGANDSVAV--------GDVIFVKLRGSSWWPVQVVDENSVNKSVKPSKRT 57

Query: 275 P---GGVLVRVYGTYTYLYRDLLKYRTEFKKILKQNDGSYLETFKKALEQDL----SHRK 117
               G +LVR YG+YTY Y D +K R EFK+IL++NDGS  +   + LEQDL    S R 
Sbjct: 58  KRLPGDILVRHYGSYTYSYADPIKCRDEFKRILERNDGSLKKVLLQTLEQDLPSTKSRRS 117

Query: 116 RTTSKRTICESGEAVAATPTDEKSKHDTNKNNEQK 12
           + +S +    S +  A          + NKN +++
Sbjct: 118 KGSSSKPKGTSSKDAAGKRKSNWEDKEQNKNKQKE 152


Top