BLASTX nr result

ID: Coptis23_contig00012100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012100
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263692.1| PREDICTED: phosducin-like protein 3 [Vitis v...   340   2e-91
ref|XP_002509555.1| Phosducin, putative [Ricinus communis] gi|22...   322   5e-86
ref|NP_001236870.1| uncharacterized protein LOC100527752 [Glycin...   320   2e-85
ref|XP_003540553.1| PREDICTED: viral IAP-associated factor homol...   319   5e-85
gb|ACU23612.1| unknown [Glycine max]                                  317   3e-84

>ref|XP_002263692.1| PREDICTED: phosducin-like protein 3 [Vitis vinifera]
           gi|296090246|emb|CBI40065.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  340 bits (873), Expect = 2e-91
 Identities = 175/252 (69%), Positives = 190/252 (75%), Gaps = 8/252 (3%)
 Frame = -3

Query: 795 MGDYHFVYKDLEGTSTQWDDIQTKLGNLXXXXXXXXXXXXXP---EDSKPKDKSWIHNKT 625
           M DYHFVYKD+EG STQWDDIQ KLGNL             P   + SKPKDKSWI  KT
Sbjct: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKDPPFKPPPFTPAPDDHSKPKDKSWIDQKT 60

Query: 624 XXXXXXXXXXXXXXXXXXXEEYRKKRLAEIKEATKVSRFGSVIPISGVDFVREVSQAESD 445
                              EEYRKKRLAE++EA K+SRFGSV+PISG DFVREVSQA SD
Sbjct: 61  EEELEDLEDDPDLDDHRFLEEYRKKRLAEMREAVKISRFGSVMPISGSDFVREVSQAPSD 120

Query: 444 VWVVVFLYKEGIAECGVVLNCLEELATKYPVTKFVKIVSTDCIQNYPDRNLPTLLVYNNG 265
           VWVVV LYKEGI ECG+++ CLEELAT+YP TKFVKI+STDCI NYPDRNLPTLLVYNNG
Sbjct: 121 VWVVVILYKEGIPECGLLMRCLEELATRYPATKFVKIISTDCIPNYPDRNLPTLLVYNNG 180

Query: 264 AVKATYVGMHHFGRRCTAEGVALALCQSDPVLNDGQSGS-----DVIEGVRKRFIEKVVA 100
           AVKA Y G+H+FGRRCT EGVAL LCQSDPVLNDGQSGS     DVIEGVRKRFIEKVV 
Sbjct: 181 AVKANYAGLHNFGRRCTPEGVALVLCQSDPVLNDGQSGSGPSREDVIEGVRKRFIEKVVT 240

Query: 99  QHEDDEDAYFSD 64
           +HEDD+D   SD
Sbjct: 241 EHEDDDDGSSSD 252


>ref|XP_002509555.1| Phosducin, putative [Ricinus communis] gi|223549454|gb|EEF50942.1|
           Phosducin, putative [Ricinus communis]
          Length = 251

 Score =  322 bits (826), Expect = 5e-86
 Identities = 166/247 (67%), Positives = 183/247 (74%), Gaps = 8/247 (3%)
 Frame = -3

Query: 795 MGDYHFVYKDLEGTSTQWDDIQTKLGNLXXXXXXXXXXXXXP---EDSKPKDKSWIHNKT 625
           MGDYHF+YKD+EG STQWDDIQ KLGNL             P   EDS PKDKSWI NKT
Sbjct: 1   MGDYHFIYKDVEGASTQWDDIQRKLGNLPEKPPAFKPPPFTPAPDEDSIPKDKSWIDNKT 60

Query: 624 XXXXXXXXXXXXXXXXXXXEEYRKKRLAEIKEATKVSRFGSVIPISGVDFVREVSQAESD 445
                               EYRKKRLAE++E  K+ +FGSV+PISG DFVREVSQA SD
Sbjct: 61  QEDLEDLEDDLDDDRFLE--EYRKKRLAEMREEAKILKFGSVLPISGSDFVREVSQAPSD 118

Query: 444 VWVVVFLYKEGIAECGVVLNCLEELATKYPVTKFVKIVSTDCIQNYPDRNLPTLLVYNNG 265
           VWV+V LYK+G  ECGV+L CLEELAT+YP TKFVKI+STDCI NYPD NLPTLLVYNNG
Sbjct: 119 VWVIVLLYKDGYQECGVLLRCLEELATRYPATKFVKIISTDCIPNYPDYNLPTLLVYNNG 178

Query: 264 AVKATYVGMHHFGRRCTAEGVALALCQSDPVLNDGQSGSD-----VIEGVRKRFIEKVVA 100
           AVKA YVG+  FGRRCT EGVAL LCQSDPVLNDGQSGSD     V+EGVR+R IEKVV 
Sbjct: 179 AVKANYVGLRSFGRRCTPEGVALVLCQSDPVLNDGQSGSDPSREAVMEGVRRRLIEKVVK 238

Query: 99  QHEDDED 79
           +HEDD+D
Sbjct: 239 EHEDDDD 245


>ref|NP_001236870.1| uncharacterized protein LOC100527752 [Glycine max]
           gi|255633114|gb|ACU16912.1| unknown [Glycine max]
          Length = 245

 Score =  320 bits (821), Expect = 2e-85
 Identities = 166/247 (67%), Positives = 185/247 (74%), Gaps = 3/247 (1%)
 Frame = -3

Query: 795 MGDYHFVYKDLEGTSTQWDDIQTKLGNLXXXXXXXXXXXXXPE--DSKPKDKSWIHNKTX 622
           MGDYHFVYKDLEG STQWDDIQ KLGNL             P+  D +PKDK+WI +KT 
Sbjct: 1   MGDYHFVYKDLEGASTQWDDIQRKLGNLPPKAPAFKPPPFTPDASDDQPKDKTWIDSKTS 60

Query: 621 XXXXXXXXXXXXXXXXXXEEYRKKRLAEIKEATKVSRFGSVIPISGVDFVREVSQAESDV 442
                              EYRKKRLAE++EA KV RFGSVI ISG DFVREVSQA SDV
Sbjct: 61  EELEDLEDDLDDDRFLQ--EYRKKRLAEMQEAAKVLRFGSVILISGSDFVREVSQAPSDV 118

Query: 441 WVVVFLYKEGIAECGVVLNCLEELATKYPVTKFVKIVSTDCIQNYPDRNLPTLLVYNNGA 262
           WVVV LYKEGI ECG+++  +EELA +YP TKFVKI+STDCI NYPDRNLPTLLVYNNGA
Sbjct: 119 WVVVILYKEGIPECGLLMQSIEELAVRYPSTKFVKIISTDCIPNYPDRNLPTLLVYNNGA 178

Query: 261 VKATYVGMHHFGRRCTAEGVALALCQSDPVLNDGQSGSD-VIEGVRKRFIEKVVAQHEDD 85
           VK  YVG+H FGRRCT EGVAL LCQSDPVLNDG +G++ +IEGVRKRFIEKVVA HE+ 
Sbjct: 179 VKGNYVGLHSFGRRCTPEGVALVLCQSDPVLNDGHNGNEAIIEGVRKRFIEKVVADHEEG 238

Query: 84  EDAYFSD 64
           +D Y SD
Sbjct: 239 DDDYSSD 245


>ref|XP_003540553.1| PREDICTED: viral IAP-associated factor homolog [Glycine max]
          Length = 245

 Score =  319 bits (817), Expect = 5e-85
 Identities = 167/247 (67%), Positives = 185/247 (74%), Gaps = 3/247 (1%)
 Frame = -3

Query: 795 MGDYHFVYKDLEGTSTQWDDIQTKLGNLXXXXXXXXXXXXXP-EDSKPKDKSWIHNKTXX 619
           MGDYHFVYKDLEG STQWDDIQ KLGNL             P  D +PKDK+WI +KT  
Sbjct: 1   MGDYHFVYKDLEGASTQWDDIQRKLGNLPPKAPAFKPPPFTPASDDQPKDKTWIDSKTSE 60

Query: 618 XXXXXXXXXXXXXXXXXEEYRKKRLAEIKEATKVSRFGSVIPISGVDFVREVSQAESDVW 439
                             EYRKKRLAE++EA KV RFGSVIPISG DFVREVSQA SDVW
Sbjct: 61  ELEDLEDNLDDDRFLQ--EYRKKRLAEMQEAAKVLRFGSVIPISGSDFVREVSQAPSDVW 118

Query: 438 VVVFLYKEGIAECGVVLNCLEELATKYPVTKFVKIVSTDCIQNYPDRNLPTLLVYNNGAV 259
           VVV LYKEGI ECG+++  +EELA +YP TKFVKI+STDCI NYPDRNLPTLLVYNNGAV
Sbjct: 119 VVVILYKEGIPECGLLMQSIEELALRYPSTKFVKIISTDCIPNYPDRNLPTLLVYNNGAV 178

Query: 258 KATYVGMHHFGRRCTAEGVALALCQSDPVLNDGQSGSD-VIEGVRKRFIEKVVAQHED-D 85
           K  YVG+H FGRRCT EGVAL LCQSDPVLNDG +G++ +IEGVRKRFIEKVVA HE+  
Sbjct: 179 KGNYVGLHSFGRRCTPEGVALVLCQSDPVLNDGHNGNEAIIEGVRKRFIEKVVADHEEGG 238

Query: 84  EDAYFSD 64
           +D Y SD
Sbjct: 239 DDDYSSD 245


>gb|ACU23612.1| unknown [Glycine max]
          Length = 245

 Score =  317 bits (811), Expect = 3e-84
 Identities = 166/247 (67%), Positives = 184/247 (74%), Gaps = 3/247 (1%)
 Frame = -3

Query: 795 MGDYHFVYKDLEGTSTQWDDIQTKLGNLXXXXXXXXXXXXXP-EDSKPKDKSWIHNKTXX 619
           MGDYHFVYKDLEG STQWDDIQ KLGNL             P  D +PKDK+WI +KT  
Sbjct: 1   MGDYHFVYKDLEGASTQWDDIQRKLGNLPPKAPAFKPPPFTPASDDQPKDKTWIDSKTSE 60

Query: 618 XXXXXXXXXXXXXXXXXEEYRKKRLAEIKEATKVSRFGSVIPISGVDFVREVSQAESDVW 439
                             EYRKKRLAE++EA KV RFGSVIPISG DFVREVSQA SDVW
Sbjct: 61  ELEDLEDNLDDDRFLQ--EYRKKRLAEMQEAAKVLRFGSVIPISGSDFVREVSQAPSDVW 118

Query: 438 VVVFLYKEGIAECGVVLNCLEELATKYPVTKFVKIVSTDCIQNYPDRNLPTLLVYNNGAV 259
           VVV LYKEGI ECG+++  +EELA +YP TKFVKI+ TDCI NYPDRNLPTLLVYNNGAV
Sbjct: 119 VVVILYKEGIPECGLLMQSIEELALRYPSTKFVKIIFTDCIPNYPDRNLPTLLVYNNGAV 178

Query: 258 KATYVGMHHFGRRCTAEGVALALCQSDPVLNDGQSGSD-VIEGVRKRFIEKVVAQHED-D 85
           K  YVG+H FGRRCT EGVAL LCQSDPVLNDG +G++ +IEGVRKRFIEKVVA HE+  
Sbjct: 179 KGNYVGLHSFGRRCTPEGVALVLCQSDPVLNDGHNGNEAIIEGVRKRFIEKVVADHEEGG 238

Query: 84  EDAYFSD 64
           +D Y SD
Sbjct: 239 DDDYSSD 245


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