BLASTX nr result

ID: Coptis23_contig00012099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012099
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82250.1| hypothetical protein VITISV_036492 [Vitis vinifera]   105   1e-33
ref|XP_002283312.1| PREDICTED: probable kinetochore protein NUF2...   105   1e-33
ref|XP_002269064.1| PREDICTED: kinetochore protein Nuf2 [Vitis v...   101   3e-33
ref|XP_002309861.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-32
ref|XP_002529275.1| kinetochore protein nuf2, putative [Ricinus ...   102   1e-30

>emb|CAN82250.1| hypothetical protein VITISV_036492 [Vitis vinifera]
          Length = 473

 Score =  105 bits (262), Expect(2) = 1e-33
 Identities = 53/91 (58%), Positives = 69/91 (75%)
 Frame = -1

Query: 428 QLNMEIEEVQDAREREKPFVSVLDAKVKELRQMILDLNNY*MSLKSSFRALREKTKEIDE 249
           QL+ EI +  +ARERE+P V  ++ KVKELRQ I  LNN  MSL++SFR ++EK  E+DE
Sbjct: 177 QLDAEIADCSEARERERPLVEEVEVKVKELRQTIPSLNNQQMSLRASFRKMKEKVTEMDE 236

Query: 248 KITTANFTLSQRAQENAKLQSKIVQSPEKLQ 156
           KI++A F L Q  QENA L+SKI+QSP+KLQ
Sbjct: 237 KISSAEFALVQSVQENANLRSKIIQSPDKLQ 267



 Score = 62.8 bits (151), Expect(2) = 1e-33
 Identities = 31/55 (56%), Positives = 41/55 (74%)
 Frame = -3

Query: 165 KVTGCLEQKKSILDEMKNSERSAMQSYEQKCTTLEVYSKAGMKMKKRLAKMQAIQ 1
           K+   LE+KKS   E+KN+E+SAMQS+++K   LEVY+KAG KM K  A+MQ IQ
Sbjct: 265 KLQRALEEKKSDRIEVKNAEKSAMQSFQEKSAILEVYTKAGKKMSKHFAQMQTIQ 319


>ref|XP_002283312.1| PREDICTED: probable kinetochore protein NUF2 [Vitis vinifera]
           gi|296082133|emb|CBI21138.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score =  105 bits (262), Expect(2) = 1e-33
 Identities = 53/91 (58%), Positives = 69/91 (75%)
 Frame = -1

Query: 428 QLNMEIEEVQDAREREKPFVSVLDAKVKELRQMILDLNNY*MSLKSSFRALREKTKEIDE 249
           QL+ EI +  +ARERE+P V  ++ KVKELRQ I  LNN  MSL++SFR ++EK  E+DE
Sbjct: 157 QLDAEIADCSEARERERPLVEEVEVKVKELRQTIPSLNNQQMSLRASFRKMKEKVTEMDE 216

Query: 248 KITTANFTLSQRAQENAKLQSKIVQSPEKLQ 156
           KI++A F L Q  QENA L+SKI+QSP+KLQ
Sbjct: 217 KISSAEFALVQSVQENANLRSKIIQSPDKLQ 247



 Score = 62.8 bits (151), Expect(2) = 1e-33
 Identities = 31/55 (56%), Positives = 41/55 (74%)
 Frame = -3

Query: 165 KVTGCLEQKKSILDEMKNSERSAMQSYEQKCTTLEVYSKAGMKMKKRLAKMQAIQ 1
           K+   LE+KKS   E+KN+E+SAMQS+++K   LEVY+KAG KM K  A+MQ IQ
Sbjct: 245 KLQRALEEKKSDRIEVKNAEKSAMQSFQEKSAILEVYTKAGKKMSKHFAQMQTIQ 299


>ref|XP_002269064.1| PREDICTED: kinetochore protein Nuf2 [Vitis vinifera]
           gi|298204517|emb|CBI23792.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score =  101 bits (252), Expect(2) = 3e-33
 Identities = 52/91 (57%), Positives = 67/91 (73%)
 Frame = -1

Query: 428 QLNMEIEEVQDAREREKPFVSVLDAKVKELRQMILDLNNY*MSLKSSFRALREKTKEIDE 249
           QL+ EI +  +ARER  P V  ++ KVK+LRQ I  LNN  MSL++SFR ++EK  E+DE
Sbjct: 157 QLDAEITDYNEARERAMPLVQEIEVKVKDLRQAIPSLNNQQMSLRTSFRKMKEKVAEMDE 216

Query: 248 KITTANFTLSQRAQENAKLQSKIVQSPEKLQ 156
           KI++A F L Q  QENA L+SKIVQSP+KLQ
Sbjct: 217 KISSAEFALVQSVQENANLRSKIVQSPDKLQ 247



 Score = 65.5 bits (158), Expect(2) = 3e-33
 Identities = 32/55 (58%), Positives = 42/55 (76%)
 Frame = -3

Query: 165 KVTGCLEQKKSILDEMKNSERSAMQSYEQKCTTLEVYSKAGMKMKKRLAKMQAIQ 1
           K+   LE+KKS+  E KN+ERSAMQS+++K   +EVY+KAG KM K  A+MQAIQ
Sbjct: 245 KLQRTLEEKKSVRVEAKNAERSAMQSFQEKSAIVEVYTKAGKKMSKHFAQMQAIQ 299


>ref|XP_002309861.1| predicted protein [Populus trichocarpa] gi|222852764|gb|EEE90311.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  106 bits (265), Expect(2) = 2e-32
 Identities = 55/91 (60%), Positives = 68/91 (74%)
 Frame = -1

Query: 428 QLNMEIEEVQDAREREKPFVSVLDAKVKELRQMILDLNNY*MSLKSSFRALREKTKEIDE 249
           QLN EI E  DARERE P    +D KVKELRQ I DLNN+ MSL++S+R L+E++ E+D 
Sbjct: 158 QLNAEIAEYNDARERELPLAQEVDGKVKELRQEIADLNNHQMSLRASYRKLKERSSEMDG 217

Query: 248 KITTANFTLSQRAQENAKLQSKIVQSPEKLQ 156
           +I+ A F L Q  QENA L+SKIVQSP+KLQ
Sbjct: 218 EISRAEFDLVQSVQENANLRSKIVQSPDKLQ 248



 Score = 57.8 bits (138), Expect(2) = 2e-32
 Identities = 29/54 (53%), Positives = 38/54 (70%)
 Frame = -3

Query: 165 KVTGCLEQKKSILDEMKNSERSAMQSYEQKCTTLEVYSKAGMKMKKRLAKMQAI 4
           K+   LE+KKS+ +E +N+ER AMQS+E K   LEVY+KA  KM K   +MQAI
Sbjct: 246 KLQRALEEKKSVREEARNAERLAMQSFEAKTAVLEVYTKALKKMSKHFDQMQAI 299


>ref|XP_002529275.1| kinetochore protein nuf2, putative [Ricinus communis]
           gi|223531264|gb|EEF33107.1| kinetochore protein nuf2,
           putative [Ricinus communis]
          Length = 450

 Score =  102 bits (255), Expect(2) = 1e-30
 Identities = 55/91 (60%), Positives = 67/91 (73%)
 Frame = -1

Query: 428 QLNMEIEEVQDAREREKPFVSVLDAKVKELRQMILDLNNY*MSLKSSFRALREKTKEIDE 249
           QLN EI E   ARE E PFV  +DAKVKELRQ + +LNN+ MSL++S R L+EK  E+D 
Sbjct: 158 QLNAEIAEYNVAREMELPFVQEVDAKVKELRQTVSELNNHQMSLRASSRKLKEKAGELDG 217

Query: 248 KITTANFTLSQRAQENAKLQSKIVQSPEKLQ 156
           +I+ A F L Q  QENA L+SKIVQSP+KLQ
Sbjct: 218 EISKAEFDLVQSVQENANLRSKIVQSPDKLQ 248



 Score = 55.5 bits (132), Expect(2) = 1e-30
 Identities = 27/54 (50%), Positives = 38/54 (70%)
 Frame = -3

Query: 165 KVTGCLEQKKSILDEMKNSERSAMQSYEQKCTTLEVYSKAGMKMKKRLAKMQAI 4
           K+   LE+KKS+ +E+KN+ER AMQS+++K   LEVYSK   K+ K   +MQ I
Sbjct: 246 KLQRALEEKKSVWEEVKNAERLAMQSFQEKTAILEVYSKTLRKISKHFNQMQEI 299


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