BLASTX nr result

ID: Coptis23_contig00012098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012098
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]     251   1e-64
emb|CBI29991.3| unnamed protein product [Vitis vinifera]              251   1e-64
ref|XP_002275932.1| PREDICTED: DNA (cytosine-5)-methyltransferas...   251   1e-64
ref|XP_002530367.1| protein with unknown function [Ricinus commu...   246   4e-63
gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]                 246   5e-63

>gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]
          Length = 925

 Score =  251 bits (641), Expect = 1e-64
 Identities = 119/164 (72%), Positives = 136/164 (82%)
 Frame = +2

Query: 5    RVCRIPKRKGANFRDLPGVLVNENNVVEWDPKVERELLPSGNPLVPDYAVSFKKGKSSKP 184
            RVCRIPK+KGANFRDLPGV V  +NVVEWDP++ER LLPSG PLVPDYA+SF KGKS KP
Sbjct: 750  RVCRIPKKKGANFRDLPGVKVGPDNVVEWDPEIERVLLPSGKPLVPDYAMSFIKGKSLKP 809

Query: 185  FRRLWWDETIATVVTRAEPHNQGILHPKDDRVLTIRENARVQGFPDYYKLSGIVKQRYCQ 364
            F RLWWDET+ TVVTRAEPHNQ +LHP+ DRVL+IRENAR+QGFPD+Y+L G VK+RY Q
Sbjct: 810  FGRLWWDETVPTVVTRAEPHNQALLHPEQDRVLSIRENARLQGFPDFYRLRGPVKERYIQ 869

Query: 365  VGNAVAVPVARGLGYAFGKACQGKSGDEALIRLPSKFPDCFQPS 496
            VGNAVAVPVAR LGY+ G A QGK  ++ +  LP KFP   Q S
Sbjct: 870  VGNAVAVPVARALGYSMGLAFQGKCSEQPVFTLPQKFPCLDQSS 913


>emb|CBI29991.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  251 bits (640), Expect = 1e-64
 Identities = 119/160 (74%), Positives = 131/160 (81%)
 Frame = +2

Query: 5    RVCRIPKRKGANFRDLPGVLVNENNVVEWDPKVERELLPSGNPLVPDYAVSFKKGKSSKP 184
            RVCRIPK+KGANFRDLPGV+V  +N VEWDP +ER LLPSG PLVPDYA+SF +GKS+KP
Sbjct: 655  RVCRIPKKKGANFRDLPGVMVGSDNRVEWDPSMERVLLPSGKPLVPDYAMSFVRGKSTKP 714

Query: 185  FRRLWWDETIATVVTRAEPHNQGILHPKDDRVLTIRENARVQGFPDYYKLSGIVKQRYCQ 364
            F RLWWDE +ATVVTRAEPHNQ I+HP  DRVLTIRENAR QGFPD YKL G VK+RY Q
Sbjct: 715  FARLWWDEIVATVVTRAEPHNQAIIHPTQDRVLTIRENARFQGFPDCYKLCGPVKERYIQ 774

Query: 365  VGNAVAVPVARGLGYAFGKACQGKSGDEALIRLPSKFPDC 484
            VGNAVAVPVA  LGY+FG A QG   D  L  LP KFP+C
Sbjct: 775  VGNAVAVPVALALGYSFGMASQGLCDDHPLATLPFKFPEC 814


>ref|XP_002275932.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Vitis vinifera]
          Length = 829

 Score =  251 bits (640), Expect = 1e-64
 Identities = 119/160 (74%), Positives = 131/160 (81%)
 Frame = +2

Query: 5    RVCRIPKRKGANFRDLPGVLVNENNVVEWDPKVERELLPSGNPLVPDYAVSFKKGKSSKP 184
            RVCRIPK+KGANFRDLPGV+V  +N VEWDP +ER LLPSG PLVPDYA+SF +GKS+KP
Sbjct: 657  RVCRIPKKKGANFRDLPGVMVGSDNRVEWDPSMERVLLPSGKPLVPDYAMSFVRGKSTKP 716

Query: 185  FRRLWWDETIATVVTRAEPHNQGILHPKDDRVLTIRENARVQGFPDYYKLSGIVKQRYCQ 364
            F RLWWDE +ATVVTRAEPHNQ I+HP  DRVLTIRENAR QGFPD YKL G VK+RY Q
Sbjct: 717  FARLWWDEIVATVVTRAEPHNQAIIHPTQDRVLTIRENARFQGFPDCYKLCGPVKERYIQ 776

Query: 365  VGNAVAVPVARGLGYAFGKACQGKSGDEALIRLPSKFPDC 484
            VGNAVAVPVA  LGY+FG A QG   D  L  LP KFP+C
Sbjct: 777  VGNAVAVPVALALGYSFGMASQGLCDDHPLATLPFKFPEC 816


>ref|XP_002530367.1| protein with unknown function [Ricinus communis]
            gi|223530114|gb|EEF32028.1| protein with unknown function
            [Ricinus communis]
          Length = 845

 Score =  246 bits (628), Expect = 4e-63
 Identities = 117/164 (71%), Positives = 134/164 (81%)
 Frame = +2

Query: 5    RVCRIPKRKGANFRDLPGVLVNENNVVEWDPKVERELLPSGNPLVPDYAVSFKKGKSSKP 184
            RVCR+PK+KGANFRD PGVLV  +N VEWDP VER LLPSG PLVPDYA+SF +G S KP
Sbjct: 681  RVCRVPKKKGANFRDFPGVLVGTDNKVEWDPAVERVLLPSGKPLVPDYAMSFVRGTSCKP 740

Query: 185  FRRLWWDETIATVVTRAEPHNQGILHPKDDRVLTIRENARVQGFPDYYKLSGIVKQRYCQ 364
            F RLWWDET+ATVVTRAEPHNQ ++HP  DRVL+IRENAR+QGFPD Y+L G VK+RY Q
Sbjct: 741  FGRLWWDETVATVVTRAEPHNQIVIHPMQDRVLSIRENARLQGFPDCYQLHGPVKERYTQ 800

Query: 365  VGNAVAVPVARGLGYAFGKACQGKSGDEALIRLPSKFPDCFQPS 496
            VGNAVAVPVA  LGY+FG A QG S ++ L  LP K+P+C Q S
Sbjct: 801  VGNAVAVPVATALGYSFGIASQGFSDNKPLTTLPFKYPNCLQKS 844


>gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]
          Length = 824

 Score =  246 bits (627), Expect = 5e-63
 Identities = 120/174 (68%), Positives = 136/174 (78%), Gaps = 1/174 (0%)
 Frame = +2

Query: 5    RVCRIPKRKGANFRDLPGVLVNENNVVEWDPKVERELLPSGNPLVPDYAVSFKKGKSSKP 184
            RVCR+PKRKGANFRD PGV+VN  N VEWDP VER  L SG PLVPDYA+SF  G SSKP
Sbjct: 651  RVCRVPKRKGANFRDFPGVIVNSGNKVEWDPNVERVYLESGKPLVPDYAMSFVGGSSSKP 710

Query: 185  FRRLWWDETIATVVTRAEPHNQGILHPKDDRVLTIRENARVQGFPDYYKLSGIVKQRYCQ 364
            F RLWWDET+ TVVTRAEPHNQ ILHP  DRVL+IRENAR+QGFPDYYKL G VK+RY Q
Sbjct: 711  FARLWWDETVPTVVTRAEPHNQAILHPVQDRVLSIRENARLQGFPDYYKLFGPVKERYIQ 770

Query: 365  VGNAVAVPVARGLGYAFGKACQG-KSGDEALIRLPSKFPDCFQPSPASEIGESS 523
            VGNAVAVPV+R LGYA G A QG  S DE L +LP +FP+  + + +    ++S
Sbjct: 771  VGNAVAVPVSRALGYALGLAYQGVVSNDEPLTKLPPRFPNISEKASSDSSQDNS 824


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