BLASTX nr result
ID: Coptis23_contig00012081
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00012081 (727 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFH03060.1| R2R3-MYB transcription factor MYB8 [Epimedium sag... 102 8e-20 ref|XP_002314123.1| predicted protein [Populus trichocarpa] gi|2... 86 6e-15 ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244... 80 3e-13 emb|CBI16001.3| unnamed protein product [Vitis vinifera] 80 6e-13 ref|XP_002525595.1| DNA binding protein, putative [Ricinus commu... 79 1e-12 >gb|AFH03060.1| R2R3-MYB transcription factor MYB8 [Epimedium sagittatum] Length = 298 Score = 102 bits (254), Expect = 8e-20 Identities = 52/88 (59%), Positives = 62/88 (70%), Gaps = 1/88 (1%) Frame = -1 Query: 727 QTAMLQQQSDLCGTTKGLFDWNQPHDGA-SMVFNSTNGNMFVPPPFGLSSYGVKMEGQDL 551 Q+AMLQQ S+ T K +F WNQPHDG +MVFN TN NMFVPP +G +SYG KM+GQ+L Sbjct: 212 QSAMLQQSSNHSSTNKPMFGWNQPHDGTPTMVFNHTNMNMFVPP-YGANSYGTKMQGQNL 270 Query: 550 HRXXXXXXXXXXXGSMFQMQSSQCFPHG 467 HR G++FQMQSSQC PHG Sbjct: 271 HRGGFHGSHIGPHGTVFQMQSSQCHPHG 298 >ref|XP_002314123.1| predicted protein [Populus trichocarpa] gi|222850531|gb|EEE88078.1| predicted protein [Populus trichocarpa] Length = 308 Score = 86.3 bits (212), Expect = 6e-15 Identities = 39/87 (44%), Positives = 54/87 (62%) Frame = -1 Query: 727 QTAMLQQQSDLCGTTKGLFDWNQPHDGASMVFNSTNGNMFVPPPFGLSSYGVKMEGQDLH 548 Q+ + QQ + + F WNQP+ GA+M FNSTN NMF+ P+G++SYG+KM+GQ+ H Sbjct: 222 QSGAISQQPNSAAMPRTHFQWNQPNSGATMAFNSTNANMFMSSPYGINSYGLKMQGQNPH 281 Query: 547 RXXXXXXXXXXXGSMFQMQSSQCFPHG 467 R FQMQS+Q +PHG Sbjct: 282 RGAVHDSYIGQQTMGFQMQSAQHYPHG 308 >ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244960 [Vitis vinifera] gi|147844863|emb|CAN81229.1| hypothetical protein VITISV_033664 [Vitis vinifera] Length = 307 Score = 80.5 bits (197), Expect = 3e-13 Identities = 36/87 (41%), Positives = 54/87 (62%) Frame = -1 Query: 727 QTAMLQQQSDLCGTTKGLFDWNQPHDGASMVFNSTNGNMFVPPPFGLSSYGVKMEGQDLH 548 Q+ + +Q + + F W+QP+ GA M FN T+GN+F+ P+G++SYG+KM+GQ+LH Sbjct: 221 QSIGVPKQPNSAPMNRTTFQWSQPNSGAPMAFNPTHGNIFMSSPYGMNSYGLKMQGQNLH 280 Query: 547 RXXXXXXXXXXXGSMFQMQSSQCFPHG 467 R +FQMQS+ FPHG Sbjct: 281 RAAFNESYIGPQSMVFQMQSTPHFPHG 307 >emb|CBI16001.3| unnamed protein product [Vitis vinifera] Length = 215 Score = 79.7 bits (195), Expect = 6e-13 Identities = 34/69 (49%), Positives = 47/69 (68%) Frame = -1 Query: 673 FDWNQPHDGASMVFNSTNGNMFVPPPFGLSSYGVKMEGQDLHRXXXXXXXXXXXGSMFQM 494 F W+QP+ GA M FN T+GN+F+ P+G++SYG+KM+GQ+LHR +FQM Sbjct: 147 FQWSQPNSGAPMAFNPTHGNIFMSSPYGMNSYGLKMQGQNLHRAAFNESYIGPQSMVFQM 206 Query: 493 QSSQCFPHG 467 QS+ FPHG Sbjct: 207 QSTPHFPHG 215 >ref|XP_002525595.1| DNA binding protein, putative [Ricinus communis] gi|223535031|gb|EEF36713.1| DNA binding protein, putative [Ricinus communis] Length = 307 Score = 78.6 bits (192), Expect = 1e-12 Identities = 37/87 (42%), Positives = 52/87 (59%) Frame = -1 Query: 727 QTAMLQQQSDLCGTTKGLFDWNQPHDGASMVFNSTNGNMFVPPPFGLSSYGVKMEGQDLH 548 Q+++ QQS+ + F WNQP+ GA M FNSTNGNMF +G++SYG+K++G +LH Sbjct: 221 QSSVFSQQSNGVSLPRTHFQWNQPNSGAIMAFNSTNGNMFTSSTYGVNSYGMKLQGYNLH 280 Query: 547 RXXXXXXXXXXXGSMFQMQSSQCFPHG 467 FQMQS+Q +P G Sbjct: 281 SGSLHESYIGPQTIAFQMQSAQHYPDG 307