BLASTX nr result

ID: Coptis23_contig00012081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012081
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFH03060.1| R2R3-MYB transcription factor MYB8 [Epimedium sag...   102   8e-20
ref|XP_002314123.1| predicted protein [Populus trichocarpa] gi|2...    86   6e-15
ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244...    80   3e-13
emb|CBI16001.3| unnamed protein product [Vitis vinifera]               80   6e-13
ref|XP_002525595.1| DNA binding protein, putative [Ricinus commu...    79   1e-12

>gb|AFH03060.1| R2R3-MYB transcription factor MYB8 [Epimedium sagittatum]
          Length = 298

 Score =  102 bits (254), Expect = 8e-20
 Identities = 52/88 (59%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
 Frame = -1

Query: 727 QTAMLQQQSDLCGTTKGLFDWNQPHDGA-SMVFNSTNGNMFVPPPFGLSSYGVKMEGQDL 551
           Q+AMLQQ S+   T K +F WNQPHDG  +MVFN TN NMFVPP +G +SYG KM+GQ+L
Sbjct: 212 QSAMLQQSSNHSSTNKPMFGWNQPHDGTPTMVFNHTNMNMFVPP-YGANSYGTKMQGQNL 270

Query: 550 HRXXXXXXXXXXXGSMFQMQSSQCFPHG 467
           HR           G++FQMQSSQC PHG
Sbjct: 271 HRGGFHGSHIGPHGTVFQMQSSQCHPHG 298


>ref|XP_002314123.1| predicted protein [Populus trichocarpa] gi|222850531|gb|EEE88078.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 39/87 (44%), Positives = 54/87 (62%)
 Frame = -1

Query: 727 QTAMLQQQSDLCGTTKGLFDWNQPHDGASMVFNSTNGNMFVPPPFGLSSYGVKMEGQDLH 548
           Q+  + QQ +     +  F WNQP+ GA+M FNSTN NMF+  P+G++SYG+KM+GQ+ H
Sbjct: 222 QSGAISQQPNSAAMPRTHFQWNQPNSGATMAFNSTNANMFMSSPYGINSYGLKMQGQNPH 281

Query: 547 RXXXXXXXXXXXGSMFQMQSSQCFPHG 467
           R              FQMQS+Q +PHG
Sbjct: 282 RGAVHDSYIGQQTMGFQMQSAQHYPHG 308


>ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244960 [Vitis vinifera]
           gi|147844863|emb|CAN81229.1| hypothetical protein
           VITISV_033664 [Vitis vinifera]
          Length = 307

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 36/87 (41%), Positives = 54/87 (62%)
 Frame = -1

Query: 727 QTAMLQQQSDLCGTTKGLFDWNQPHDGASMVFNSTNGNMFVPPPFGLSSYGVKMEGQDLH 548
           Q+  + +Q +     +  F W+QP+ GA M FN T+GN+F+  P+G++SYG+KM+GQ+LH
Sbjct: 221 QSIGVPKQPNSAPMNRTTFQWSQPNSGAPMAFNPTHGNIFMSSPYGMNSYGLKMQGQNLH 280

Query: 547 RXXXXXXXXXXXGSMFQMQSSQCFPHG 467
           R             +FQMQS+  FPHG
Sbjct: 281 RAAFNESYIGPQSMVFQMQSTPHFPHG 307


>emb|CBI16001.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 34/69 (49%), Positives = 47/69 (68%)
 Frame = -1

Query: 673 FDWNQPHDGASMVFNSTNGNMFVPPPFGLSSYGVKMEGQDLHRXXXXXXXXXXXGSMFQM 494
           F W+QP+ GA M FN T+GN+F+  P+G++SYG+KM+GQ+LHR             +FQM
Sbjct: 147 FQWSQPNSGAPMAFNPTHGNIFMSSPYGMNSYGLKMQGQNLHRAAFNESYIGPQSMVFQM 206

Query: 493 QSSQCFPHG 467
           QS+  FPHG
Sbjct: 207 QSTPHFPHG 215


>ref|XP_002525595.1| DNA binding protein, putative [Ricinus communis]
           gi|223535031|gb|EEF36713.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 307

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 37/87 (42%), Positives = 52/87 (59%)
 Frame = -1

Query: 727 QTAMLQQQSDLCGTTKGLFDWNQPHDGASMVFNSTNGNMFVPPPFGLSSYGVKMEGQDLH 548
           Q+++  QQS+     +  F WNQP+ GA M FNSTNGNMF    +G++SYG+K++G +LH
Sbjct: 221 QSSVFSQQSNGVSLPRTHFQWNQPNSGAIMAFNSTNGNMFTSSTYGVNSYGMKLQGYNLH 280

Query: 547 RXXXXXXXXXXXGSMFQMQSSQCFPHG 467
                          FQMQS+Q +P G
Sbjct: 281 SGSLHESYIGPQTIAFQMQSAQHYPDG 307


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