BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012068
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vit...   366   2e-99
emb|CBI40154.3| unnamed protein product [Vitis vinifera]              366   2e-99
emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]   366   2e-99
ref|XP_002513066.1| conserved hypothetical protein [Ricinus comm...   363   2e-98
ref|XP_004157509.1| PREDICTED: F-box protein At3g54460-like [Cuc...   342   4e-92

>ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vitis vinifera]
          Length = 1408

 Score =  366 bits (940), Expect = 2e-99
 Identities = 181/246 (73%), Positives = 196/246 (79%), Gaps = 18/246 (7%)
 Frame = +2

Query: 2    EYVFIKISLQDGGNCFRCKEWCRLPVITPCRHLLCLDCVAMDSEKCVLPGCGNLYEMQSP 181
            EY FIK +L  GG C RCKEWCRLPVITPCRHLLCLDCVA+DSEKC  PGCGNLYEMQSP
Sbjct: 1064 EYAFIKYNLLYGGACMRCKEWCRLPVITPCRHLLCLDCVALDSEKCTFPGCGNLYEMQSP 1123

Query: 182  ETLARPENPNPKWPVPKDLIELQPSYKQDDWDPDWHATSSSKVAYLVERLKNIQEANTKM 361
            E L RPENPNPKWPVPKDLIELQPSYKQD WDPDW +TSSSKV Y+V+RLK +QEAN K 
Sbjct: 1124 EILTRPENPNPKWPVPKDLIELQPSYKQDTWDPDWQSTSSSKVTYIVKRLKALQEANRKS 1183

Query: 362  ------DSSLNEVDVL----EPSEKLILPSQNY--------KTTPEKVIIFSQFLEHIHV 487
                  DS + ++D L    E +    L  Q+Y          +PEKV+IFSQFLEHIHV
Sbjct: 1184 GYAMDEDSDIKDIDELVSLSEQNNCNALLQQDYTRLNDETSHISPEKVLIFSQFLEHIHV 1243

Query: 488  IEQQLTGSGIKFVGMYSPMHSSNKMKSLMTFQHDENCMALLMDGSAALGLDLSFVTHVFL 667
            IEQQLT +GIKF GMYSPMHSSNKMKSL TFQHD +CMALLMDGSAALGLDLSFVTHVFL
Sbjct: 1244 IEQQLTVAGIKFSGMYSPMHSSNKMKSLSTFQHDADCMALLMDGSAALGLDLSFVTHVFL 1303

Query: 668  MEPIWD 685
            MEPIWD
Sbjct: 1304 MEPIWD 1309


>emb|CBI40154.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  366 bits (940), Expect = 2e-99
 Identities = 181/246 (73%), Positives = 196/246 (79%), Gaps = 18/246 (7%)
 Frame = +2

Query: 2    EYVFIKISLQDGGNCFRCKEWCRLPVITPCRHLLCLDCVAMDSEKCVLPGCGNLYEMQSP 181
            EY FIK +L  GG C RCKEWCRLPVITPCRHLLCLDCVA+DSEKC  PGCGNLYEMQSP
Sbjct: 822  EYAFIKYNLLYGGACMRCKEWCRLPVITPCRHLLCLDCVALDSEKCTFPGCGNLYEMQSP 881

Query: 182  ETLARPENPNPKWPVPKDLIELQPSYKQDDWDPDWHATSSSKVAYLVERLKNIQEANTKM 361
            E L RPENPNPKWPVPKDLIELQPSYKQD WDPDW +TSSSKV Y+V+RLK +QEAN K 
Sbjct: 882  EILTRPENPNPKWPVPKDLIELQPSYKQDTWDPDWQSTSSSKVTYIVKRLKALQEANRKS 941

Query: 362  ------DSSLNEVDVL----EPSEKLILPSQNY--------KTTPEKVIIFSQFLEHIHV 487
                  DS + ++D L    E +    L  Q+Y          +PEKV+IFSQFLEHIHV
Sbjct: 942  GYAMDEDSDIKDIDELVSLSEQNNCNALLQQDYTRLNDETSHISPEKVLIFSQFLEHIHV 1001

Query: 488  IEQQLTGSGIKFVGMYSPMHSSNKMKSLMTFQHDENCMALLMDGSAALGLDLSFVTHVFL 667
            IEQQLT +GIKF GMYSPMHSSNKMKSL TFQHD +CMALLMDGSAALGLDLSFVTHVFL
Sbjct: 1002 IEQQLTVAGIKFSGMYSPMHSSNKMKSLSTFQHDADCMALLMDGSAALGLDLSFVTHVFL 1061

Query: 668  MEPIWD 685
            MEPIWD
Sbjct: 1062 MEPIWD 1067


>emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]
          Length = 1208

 Score =  366 bits (940), Expect = 2e-99
 Identities = 181/246 (73%), Positives = 196/246 (79%), Gaps = 18/246 (7%)
 Frame = +2

Query: 2    EYVFIKISLQDGGNCFRCKEWCRLPVITPCRHLLCLDCVAMDSEKCVLPGCGNLYEMQSP 181
            EY FIK +L  GG C RCKEWCRLPVITPCRHLLCLDCVA+DSEKC  PGCGNLYEMQSP
Sbjct: 875  EYAFIKYNLLYGGACMRCKEWCRLPVITPCRHLLCLDCVALDSEKCTFPGCGNLYEMQSP 934

Query: 182  ETLARPENPNPKWPVPKDLIELQPSYKQDDWDPDWHATSSSKVAYLVERLKNIQEANTKM 361
            E L RPENPNPKWPVPKDLIELQPSYKQD WDPDW +TSSSKV Y+V+RLK +QEAN K 
Sbjct: 935  EILTRPENPNPKWPVPKDLIELQPSYKQDTWDPDWQSTSSSKVTYIVKRLKALQEANRKS 994

Query: 362  ------DSSLNEVDVL----EPSEKLILPSQNY--------KTTPEKVIIFSQFLEHIHV 487
                  DS + ++D L    E +    L  Q+Y          +PEKV+IFSQFLEHIHV
Sbjct: 995  GYAMDEDSDIKDIDELVSLSEQNNCNALLQQDYTRLNDETSHISPEKVLIFSQFLEHIHV 1054

Query: 488  IEQQLTGSGIKFVGMYSPMHSSNKMKSLMTFQHDENCMALLMDGSAALGLDLSFVTHVFL 667
            IEQQLT +GIKF GMYSPMHSSNKMKSL TFQHD +CMALLMDGSAALGLDLSFVTHVFL
Sbjct: 1055 IEQQLTVAGIKFSGMYSPMHSSNKMKSLSTFQHDADCMALLMDGSAALGLDLSFVTHVFL 1114

Query: 668  MEPIWD 685
            MEPIWD
Sbjct: 1115 MEPIWD 1120


>ref|XP_002513066.1| conserved hypothetical protein [Ricinus communis]
            gi|223548077|gb|EEF49569.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1322

 Score =  363 bits (931), Expect = 2e-98
 Identities = 173/244 (70%), Positives = 192/244 (78%), Gaps = 16/244 (6%)
 Frame = +2

Query: 2    EYVFIKISLQDGGNCFRCKEWCRLPVITPCRHLLCLDCVAMDSEKCVLPGCGNLYEMQSP 181
            EY  IK  LQ GGNC RC+EWCRLPV+TPCRHLLCLDCV +DSEKC LPGCG LYEMQ+P
Sbjct: 991  EYALIKYYLQYGGNCLRCQEWCRLPVVTPCRHLLCLDCVGLDSEKCTLPGCGYLYEMQTP 1050

Query: 182  ETLARPENPNPKWPVPKDLIELQPSYKQDDWDPDWHATSSSKVAYLVERLKNIQEANTKM 361
            ++L RPENPNPKWPVPKDLIELQPSYKQDDWDPDW +TSSSKV+YLV+R+K + EAN++ 
Sbjct: 1051 DSLTRPENPNPKWPVPKDLIELQPSYKQDDWDPDWQSTSSSKVSYLVQRMKVLLEANSES 1110

Query: 362  DSSLNEVDVLEPSEKLI----------------LPSQNYKTTPEKVIIFSQFLEHIHVIE 493
                 E D     E L                   S++YK  PEKV+IFSQFLEHIHVIE
Sbjct: 1111 GHYDKEADAKNIKEHLYPSQIGESNALLQDCSRQSSESYKKAPEKVLIFSQFLEHIHVIE 1170

Query: 494  QQLTGSGIKFVGMYSPMHSSNKMKSLMTFQHDENCMALLMDGSAALGLDLSFVTHVFLME 673
            QQLT +GIKF G+YSPMHSSNKMKSL TFQHD  C+ALLMDGSAALGLDLSFVTHVFLME
Sbjct: 1171 QQLTFAGIKFAGLYSPMHSSNKMKSLATFQHDATCLALLMDGSAALGLDLSFVTHVFLME 1230

Query: 674  PIWD 685
            PIWD
Sbjct: 1231 PIWD 1234


>ref|XP_004157509.1| PREDICTED: F-box protein At3g54460-like [Cucumis sativus]
          Length = 1366

 Score =  342 bits (877), Expect = 4e-92
 Identities = 166/239 (69%), Positives = 190/239 (79%), Gaps = 11/239 (4%)
 Frame = +2

Query: 2    EYVFIKISLQDGGNCFRCKEWCRLPVITPCRHLLCLDCVAMDSEKCVLPGCGNLYEMQSP 181
            EY ++K +L  GG+C RC EWCRLPVI PCRHLLCLDCVA+DSE C  PGCG LY MQ+P
Sbjct: 1039 EYSYLKYNLLYGGSCSRCGEWCRLPVIAPCRHLLCLDCVALDSEGCTFPGCGKLYVMQTP 1098

Query: 182  ETLARPENPNPKWPVPKDLIELQPSYKQDDWDPDWHATSSSKVAYLVERLKNIQEAN--- 352
            ETLARPENPNPKWPVPKDLIELQPSYKQD+WDPDW +TSSSKVAYL+ERLK++ E N   
Sbjct: 1099 ETLARPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVAYLIERLKDLSETNNEA 1158

Query: 353  --------TKMDSSLNEVDVLEPSEKLILPSQNYKTTPEKVIIFSQFLEHIHVIEQQLTG 508
                    TK  + L EVD      + I  + +++   +KV+IFSQFLEHIHVIEQQLT 
Sbjct: 1159 ALLPPSSLTKSGALLQEVD----HSRAI--TSDHEIVRDKVLIFSQFLEHIHVIEQQLTI 1212

Query: 509  SGIKFVGMYSPMHSSNKMKSLMTFQHDENCMALLMDGSAALGLDLSFVTHVFLMEPIWD 685
            +GI+F GMYSPMH+SNKMKSL  FQHD +CM LLMDGSAALGLDLSFVT+VFLMEPIWD
Sbjct: 1213 AGIRFAGMYSPMHASNKMKSLAMFQHDASCMVLLMDGSAALGLDLSFVTYVFLMEPIWD 1271