BLASTX nr result

ID: Coptis23_contig00012063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012063
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265615.1| PREDICTED: uncharacterized protein LOC100264...   107   9e-21
ref|XP_002529984.1| hypothetical protein RCOM_1264330 [Ricinus c...   102   2e-19
emb|CBI35075.3| unnamed protein product [Vitis vinifera]              102   3e-19
ref|XP_003523948.1| PREDICTED: uncharacterized protein LOC100785...    79   2e-12
ref|XP_002303944.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-11

>ref|XP_002265615.1| PREDICTED: uncharacterized protein LOC100264272 [Vitis vinifera]
          Length = 413

 Score =  107 bits (266), Expect = 9e-21
 Identities = 89/282 (31%), Positives = 133/282 (47%), Gaps = 53/282 (18%)
 Frame = +3

Query: 411  MEWYMCRDGGEMIVPQDQELSEQSVSQDNSFQW-----------------------EE-- 515
            M+ Y      E +VP+D EL +   S D   QW                       EE  
Sbjct: 4    MDQYFGNGTEEFVVPKDLELLDNVESPDIWLQWGINPSESFGSLNKYFIMETETAGEELK 63

Query: 516  --GLSMCGELPVSNY---GVWASETRLVGDWLE--------------YQLHGLSEMDQMN 638
              G ++C E         G  +S + + G + E              +QL  L+ MDQM+
Sbjct: 64   FNGKNLCNEADKETSVHDGDISSGSSIGGGFTEASLHRSAFSRDRPYFQLDELAGMDQMD 123

Query: 639  DNFMSSFLQEDLPHMRNTYQSVGMFSESKCSTVPFDNLLKDVDMDSQSIPKDQWRREDLK 818
              F++S L EDLP+  N  ++     ES+ S +P +N ++D+ +DSQSI  +  R    K
Sbjct: 124  TIFLTSLL-EDLPNTENFNRTFCFSPESQHSAMPENNQMEDMILDSQSISSNLHRMGSSK 182

Query: 819  YLEVPS---SMDWDKLD------GPSTSISYDSEKEKGSLTRNALGSETNTSPMADGQLD 971
            YL+  +   S+DWD  +       P  S+  D    K  + +  + S  N     +  + 
Sbjct: 183  YLKTHAFSPSVDWDSEEVTTLCHNPCNSVQKDCPPVKAPMIKFLVPSGPNK---VEEHVP 239

Query: 972  EETSMEENALQELEVAMTQLTQETRICFRDALYRLARSSEQL 1097
            EE S+EE+ L ELEV M QL ++TRICFRDAL+RLA++SE+L
Sbjct: 240  EEISLEESVLHELEVVMEQLPEKTRICFRDALFRLAKNSERL 281


>ref|XP_002529984.1| hypothetical protein RCOM_1264330 [Ricinus communis]
            gi|223530507|gb|EEF32389.1| hypothetical protein
            RCOM_1264330 [Ricinus communis]
          Length = 365

 Score =  102 bits (255), Expect = 2e-19
 Identities = 69/181 (38%), Positives = 100/181 (55%), Gaps = 7/181 (3%)
 Frame = +3

Query: 573  TRLVGDWLEYQLHGLSEMDQMNDNFMSSFLQEDLPHMRNTYQSVGMFSESKCSTVPFDNL 752
            T L  D L YQL GL++ DQM+D F+SS + EDLP   N   S     E +   V  D++
Sbjct: 90   TALSCDQLAYQLDGLAQFDQMDDLFLSSLI-EDLPRTENVQDSFCFEPELENDMVHGDSI 148

Query: 753  LKDVDMDSQSIPKD-------QWRREDLKYLEVPSSMDWDKLDGPSTSISYDSEKEKGSL 911
            L D+++D+ SI  D       +   +D++ L    S  + + + P   +   SE +  S+
Sbjct: 149  LTDMNLDTPSISSDTQSVGSSKTSSDDIRAL----SYTYVRHEAPHVEVLVPSEHD--SI 202

Query: 912  TRNALGSETNTSPMADGQLDEETSMEENALQELEVAMTQLTQETRICFRDALYRLARSSE 1091
              N               +DEETS+EE+ LQE+E+ M+QLT +TRICFRDALYRLA++S 
Sbjct: 203  KEN---------------VDEETSLEESVLQEMEMVMSQLTDKTRICFRDALYRLAKNSR 247

Query: 1092 Q 1094
            Q
Sbjct: 248  Q 248


>emb|CBI35075.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  102 bits (253), Expect = 3e-19
 Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 9/167 (5%)
 Frame = +3

Query: 624  MDQMNDNFMSSFLQEDLPHMRNTYQSVGMFSESKCSTVPFDNLLKDVDMDSQSIPKDQWR 803
            MDQM+  F++S L EDLP+  N  ++     ES+ S +P +N ++D+ +DSQSI  +  R
Sbjct: 1    MDQMDTIFLTSLL-EDLPNTENFNRTFCFSPESQHSAMPENNQMEDMILDSQSISSNLHR 59

Query: 804  REDLKYLEVPS---SMDWDKLD------GPSTSISYDSEKEKGSLTRNALGSETNTSPMA 956
                KYL+  +   S+DWD  +       P  S+  D    K  + +  + S  N     
Sbjct: 60   MGSSKYLKTHAFSPSVDWDSEEVTTLCHNPCNSVQKDCPPVKAPMIKFLVPSGPNK---V 116

Query: 957  DGQLDEETSMEENALQELEVAMTQLTQETRICFRDALYRLARSSEQL 1097
            +  + EE S+EE+ L ELEV M QL ++TRICFRDAL+RLA++SE+L
Sbjct: 117  EEHVPEEISLEESVLHELEVVMEQLPEKTRICFRDALFRLAKNSERL 163


>ref|XP_003523948.1| PREDICTED: uncharacterized protein LOC100785636 [Glycine max]
          Length = 372

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 74/274 (27%), Positives = 115/274 (41%), Gaps = 43/274 (15%)
 Frame = +3

Query: 411  MEWYMCRDGGEMIVPQDQELSEQSVSQDNSFQW----EEGL------------------- 521
            M+WY      + +VP+DQ+L ++  S D    W     EG                    
Sbjct: 1    MDWYYGNGVNDYLVPRDQDLLDRHPSPDYWSNWGISATEGFNSPKNLFIMDFFEERFNNQ 60

Query: 522  ----------------SMCGELPVSNYGVWASETRLVGDWLEYQLHGLSEMDQMNDNFMS 653
                            S+CG LP  ++     +T L  D   YQL  L   + MND F+ 
Sbjct: 61   IELEPSLHDKDQSSSSSVCGGLPEQSF----QQTALSCDQPNYQLQDLLRFEPMNDTFLD 116

Query: 654  SFLQEDLPHMRNTYQSVGMFSESKCSTVPFDNLLKDVDMDSQSIPKDQWRRED-LKYLEV 830
            S + E LP                   V  +NL K +++     P++QW     +   E+
Sbjct: 117  S-VPEGLPW------------------VDVENLDKSINIS----PENQWSSTPGILQKEM 153

Query: 831  PSSMDWDKLDGPSTSISYDSEKEKGSLTRNALGSETNTSPMA---DGQLDEETSMEENAL 1001
            P+S           S+S +SE +        L    ++       DG  ++ +S+EE  L
Sbjct: 154  PASK----------SVSSNSESKDCLDIEAPLAKVLDSFEQCNRDDGMCEQSSSLEEFIL 203

Query: 1002 QELEVAMTQLTQETRICFRDALYRLARSSEQLHL 1103
            ++LE+ + Q T+ TRICFRDALYRLAR++E+ H+
Sbjct: 204  KDLEMVIGQFTERTRICFRDALYRLARNTEEQHV 237


>ref|XP_002303944.1| predicted protein [Populus trichocarpa] gi|222841376|gb|EEE78923.1|
            predicted protein [Populus trichocarpa]
          Length = 427

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
 Frame = +3

Query: 660  LQEDLPHMRNTYQSVGMFSESKCSTVPFDNLLKDVDMDSQSIPKDQWRREDLKYLEVPS- 836
            L ED P   N + S     E++C+ +  DN L D  +D QSI  D       KYL+  + 
Sbjct: 169  LLEDQPTNENLHGSFCFSPEAECAMISADNRLTDKILDLQSILNDARGMGSSKYLKTHAF 228

Query: 837  --SMDWDKLD------GPSTSISYDSEKEKGSLTRNALGSETNTSPMADGQLDEETSMEE 992
              S  W+K +       P  S   D    +  L   ++ SE +++    G +D+ETS ++
Sbjct: 229  SPSASWEKDEVAASHFNPCNSEQKDWAPAEAQLVNVSVPSEHDSTI---GPVDDETS-QQ 284

Query: 993  NALQELEVAMTQLTQETRICFRDALYRLARSSEQ 1094
            +AL ELE+ + QL  +TRICFRD LYRLA  S Q
Sbjct: 285  SALHELEMVLAQLNDKTRICFRDGLYRLASYSRQ 318


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