BLASTX nr result

ID: Coptis23_contig00012062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012062
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283199.1| PREDICTED: uncharacterized protein LOC100256...   157   7e-37
gb|AAX95755.2| hypothetical protein LES1_20t00007 [Solanum lycop...   147   1e-33
ref|XP_002318033.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|XP_002511427.1| conserved hypothetical protein [Ricinus comm...   139   2e-31
gb|AFK49218.1| unknown [Lotus japonicus]                              136   2e-30

>ref|XP_002283199.1| PREDICTED: uncharacterized protein LOC100256944 [Vitis vinifera]
           gi|297733811|emb|CBI15058.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  157 bits (398), Expect = 7e-37
 Identities = 73/102 (71%), Positives = 79/102 (77%)
 Frame = -1

Query: 307 MPGPGPHTMYALGSGLALMNLSNGRFSPQHCIIYAINAFLGPDLGSFSEWLTSTLGVAQD 128
           MPGPGPH MYALGS L LM+ SNGRFSP H + YAINAF GPDLGSFSEWLTSTLG    
Sbjct: 1   MPGPGPHMMYALGSSLGLMSTSNGRFSPHHSLAYAINAFFGPDLGSFSEWLTSTLGFGHS 60

Query: 127 LGSLIMNSIHDPFYYIFILGAPLCFFYSWASRICLQRGVLDS 2
            GS + + IHDPF+YI ILG PL F YSW SR+ LQRG LDS
Sbjct: 61  FGSALADVIHDPFFYIVILGLPLSFLYSWLSRVLLQRGFLDS 102


>gb|AAX95755.2| hypothetical protein LES1_20t00007 [Solanum lycopersicum]
          Length = 147

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/102 (65%), Positives = 79/102 (77%)
 Frame = -1

Query: 307 MPGPGPHTMYALGSGLALMNLSNGRFSPQHCIIYAINAFLGPDLGSFSEWLTSTLGVAQD 128
           MPGPGPH MY LGSGL LM++SNGRFSP HC+ Y+INAF GPD+GSFSEWLTSTLG+   
Sbjct: 1   MPGPGPHMMYTLGSGLGLMSVSNGRFSPHHCVTYSINAFFGPDIGSFSEWLTSTLGLGSA 60

Query: 127 LGSLIMNSIHDPFYYIFILGAPLCFFYSWASRICLQRGVLDS 2
           LG  I   IHDPFY+I ILG P+   YS  S+  L++G+LDS
Sbjct: 61  LGYAIEPWIHDPFYHILILGIPMSMLYSALSKFLLKKGLLDS 102


>ref|XP_002318033.1| predicted protein [Populus trichocarpa] gi|222858706|gb|EEE96253.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/103 (65%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
 Frame = -1

Query: 307 MPGPGPHTMYALGSGLALMNLSNGRFSPQHCIIYAINAFLGPDLGSFSEWLTSTLGVA-Q 131
           MPGPGPH MY + SGLAL  L++GRFSP H + Y INAF GPD+GSFSEWL S LG + Q
Sbjct: 1   MPGPGPHLMYTMASGLALTTLTSGRFSPHHTLFYTINAFFGPDIGSFSEWLGSILGSSLQ 60

Query: 130 DLGSLIMNSIHDPFYYIFILGAPLCFFYSWASRICLQRGVLDS 2
            LGS + + IHDPFYYI ILG PLC  Y+W S+I LQR +LDS
Sbjct: 61  LLGSSLADYIHDPFYYILILGLPLCVLYTWVSKILLQRKLLDS 103


>ref|XP_002511427.1| conserved hypothetical protein [Ricinus communis]
           gi|223550542|gb|EEF52029.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 262

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/103 (63%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
 Frame = -1

Query: 307 MPGPGPHTMYALGSGLALMNLSNGRFSPQHCIIYAINAFLGPDLGSFSEWLTSTLG-VAQ 131
           MPGPG H MYA+GSG+AL  ++ GRFSP H + Y INAF GPD+GSFSEWL S LG  AQ
Sbjct: 1   MPGPGAHLMYAMGSGVALTTMTKGRFSPHHTLTYTINAFFGPDIGSFSEWLGSNLGSSAQ 60

Query: 130 DLGSLIMNSIHDPFYYIFILGAPLCFFYSWASRICLQRGVLDS 2
            LGS +   IHDPF+Y+ ILG PL  FYSW S++ LQR  LDS
Sbjct: 61  QLGSALAEYIHDPFFYVLILGFPLSVFYSWVSKVLLQRKFLDS 103


>gb|AFK49218.1| unknown [Lotus japonicus]
          Length = 147

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/103 (61%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
 Frame = -1

Query: 307 MPGPGPHTMYALGSGLALMNLSNGRFSPQHCIIYAINAFLGPDLGSFSEWLTSTL-GVAQ 131
           MPGPGPH MYA+GSGLAL   +NGRFSP H + Y +N+F GPD+GSFSEWL S L G A 
Sbjct: 1   MPGPGPHLMYAMGSGLALTTSTNGRFSPHHTLFYTVNSFFGPDIGSFSEWLGSLLGGPAD 60

Query: 130 DLGSLIMNSIHDPFYYIFILGAPLCFFYSWASRICLQRGVLDS 2
            +GS + + IH P YYI ILG PLC  YSW S   +QR +LDS
Sbjct: 61  TVGSAVADLIHHPLYYILILGFPLCVLYSWISAFLIQRHLLDS 103


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