BLASTX nr result
ID: Coptis23_contig00012050
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00012050
(887 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278320.1| PREDICTED: PITH domain-containing protein At... 228 6e-79
ref|XP_002512222.1| conserved hypothetical protein [Ricinus comm... 219 5e-77
gb|AFK42155.1| unknown [Medicago truncatula] 219 3e-75
ref|XP_002884470.1| hypothetical protein ARALYDRAFT_477747 [Arab... 213 2e-74
ref|XP_002319068.1| predicted protein [Populus trichocarpa] gi|2... 215 5e-74
>ref|XP_002278320.1| PREDICTED: PITH domain-containing protein At3g04780 [Vitis
vinifera] gi|298204881|emb|CBI34188.3| unnamed protein
product [Vitis vinifera]
Length = 176
Score = 228 bits (580), Expect(2) = 6e-79
Identities = 109/124 (87%), Positives = 119/124 (95%)
Frame = -1
Query: 632 ESDADEQLLVYIPFTQVIKLHSVSIKGPEDEGAMTVKLFANKEHMGFSNVNDFPPSDTVV 453
ESDADEQLL+YIPFTQVIKLHS++IKGPE+EG TVKLF+NKEHMGFSNVNDFPPSDTV
Sbjct: 53 ESDADEQLLIYIPFTQVIKLHSIAIKGPEEEGPKTVKLFSNKEHMGFSNVNDFPPSDTVA 112
Query: 452 LSPDNLKGKPVLLKYVKFQNVRSLTVFIEDNQSGADITKVQKIVFYGSTVETTDMKGLKK 273
LS DNLKGKP++LKYVKFQNVRSLT+FIEDNQSG++ITKVQKIV YGSTVETTDMKGLKK
Sbjct: 113 LSSDNLKGKPIVLKYVKFQNVRSLTIFIEDNQSGSEITKVQKIVLYGSTVETTDMKGLKK 172
Query: 272 IEDH 261
IEDH
Sbjct: 173 IEDH 176
Score = 93.6 bits (231), Expect(2) = 6e-79
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = -2
Query: 853 MSTESSSAIYRNQVDLLDFIDWTGVECLNQKPNHSIVNALKQGYREDEGLILESDAD 683
MS ES++AI RNQ DLLDFIDWTGVECLNQ + S+ NALKQGYRED+GL LESDAD
Sbjct: 1 MSAESATAIQRNQADLLDFIDWTGVECLNQSTSQSLANALKQGYREDDGLHLESDAD 57
>ref|XP_002512222.1| conserved hypothetical protein [Ricinus communis]
gi|223548183|gb|EEF49674.1| conserved hypothetical
protein [Ricinus communis]
Length = 176
Score = 219 bits (559), Expect(2) = 5e-77
Identities = 103/124 (83%), Positives = 116/124 (93%)
Frame = -1
Query: 632 ESDADEQLLVYIPFTQVIKLHSVSIKGPEDEGAMTVKLFANKEHMGFSNVNDFPPSDTVV 453
ESDADEQLL+YIPFTQVIKLHS+ IKGPE+EG TVKLF+NKEHMGFSNVNDFPPSDTV+
Sbjct: 53 ESDADEQLLIYIPFTQVIKLHSIVIKGPEEEGPKTVKLFSNKEHMGFSNVNDFPPSDTVI 112
Query: 452 LSPDNLKGKPVLLKYVKFQNVRSLTVFIEDNQSGADITKVQKIVFYGSTVETTDMKGLKK 273
LSPD L+GKPV+LKYVKFQNVRSLT+FIEDN +G+DITKVQK +G+TVETTDMKGLKK
Sbjct: 113 LSPDTLQGKPVVLKYVKFQNVRSLTIFIEDNHTGSDITKVQKFALFGTTVETTDMKGLKK 172
Query: 272 IEDH 261
+EDH
Sbjct: 173 VEDH 176
Score = 95.5 bits (236), Expect(2) = 5e-77
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = -2
Query: 853 MSTESSSAIYRNQVDLLDFIDWTGVECLNQKPNHSIVNALKQGYREDEGLILESDAD 683
MS ES++AI R+QVDL+DF+DW+GVECLNQ P+HS+ NALKQGYRED+GL LESDAD
Sbjct: 1 MSAESATAIQRSQVDLVDFVDWSGVECLNQNPSHSLSNALKQGYREDDGLNLESDAD 57
>gb|AFK42155.1| unknown [Medicago truncatula]
Length = 177
Score = 219 bits (558), Expect(2) = 3e-75
Identities = 106/124 (85%), Positives = 118/124 (95%)
Frame = -1
Query: 632 ESDADEQLLVYIPFTQVIKLHSVSIKGPEDEGAMTVKLFANKEHMGFSNVNDFPPSDTVV 453
ESDADEQLL+YIPFTQVIKL+SV+ KGPEDEG TVKLF+NKEHMGFSNVND+PPSDT+V
Sbjct: 54 ESDADEQLLLYIPFTQVIKLYSVAFKGPEDEGPKTVKLFSNKEHMGFSNVNDYPPSDTLV 113
Query: 452 LSPDNLKGKPVLLKYVKFQNVRSLTVFIEDNQSGADITKVQKIVFYGSTVETTDMKGLKK 273
LSP+NLKGKPVLLKYVKFQNVRSLT+FIEDNQ+ ++ITKVQKI+ GSTVETTDMKGLKK
Sbjct: 114 LSPENLKGKPVLLKYVKFQNVRSLTIFIEDNQTDSEITKVQKIMLIGSTVETTDMKGLKK 173
Query: 272 IEDH 261
IEDH
Sbjct: 174 IEDH 177
Score = 89.7 bits (221), Expect(2) = 3e-75
Identities = 43/58 (74%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = -2
Query: 853 MSTESSS-AIYRNQVDLLDFIDWTGVECLNQKPNHSIVNALKQGYREDEGLILESDAD 683
MS ES++ A+++ QVDLLDFIDWTGVECLNQK N+S+ NA+KQGYRED+GL LESDAD
Sbjct: 1 MSGESATTAVHKGQVDLLDFIDWTGVECLNQKTNNSLPNAIKQGYREDDGLHLESDAD 58
>ref|XP_002884470.1| hypothetical protein ARALYDRAFT_477747 [Arabidopsis lyrata subsp.
lyrata] gi|297330310|gb|EFH60729.1| hypothetical protein
ARALYDRAFT_477747 [Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 213 bits (541), Expect(2) = 2e-74
Identities = 102/124 (82%), Positives = 113/124 (91%)
Frame = -1
Query: 632 ESDADEQLLVYIPFTQVIKLHSVSIKGPEDEGAMTVKLFANKEHMGFSNVNDFPPSDTVV 453
ESDADEQLL+YIPF QVIKLHS +IKGPE+EG TVK F+NKEHM FSNVNDFPPSDT
Sbjct: 53 ESDADEQLLIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAE 112
Query: 452 LSPDNLKGKPVLLKYVKFQNVRSLTVFIEDNQSGADITKVQKIVFYGSTVETTDMKGLKK 273
L+ +NLKGKPV+LKYVKFQNVRSLT+FIEDNQSG+++TKVQKI YGSTVETTDMKGLKK
Sbjct: 113 LTEENLKGKPVVLKYVKFQNVRSLTIFIEDNQSGSEVTKVQKIALYGSTVETTDMKGLKK 172
Query: 272 IEDH 261
IEDH
Sbjct: 173 IEDH 176
Score = 94.0 bits (232), Expect(2) = 2e-74
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = -2
Query: 853 MSTESSSAIYRNQVDLLDFIDWTGVECLNQKPNHSIVNALKQGYREDEGLILESDAD 683
MS ES+S I + QVDLLDFIDW+GVECLNQ NHS+ NALKQGYREDEGL LESDAD
Sbjct: 1 MSAESASQIPKGQVDLLDFIDWSGVECLNQSSNHSLPNALKQGYREDEGLNLESDAD 57
>ref|XP_002319068.1| predicted protein [Populus trichocarpa] gi|222857444|gb|EEE94991.1|
predicted protein [Populus trichocarpa]
Length = 176
Score = 215 bits (547), Expect(2) = 5e-74
Identities = 100/124 (80%), Positives = 115/124 (92%)
Frame = -1
Query: 632 ESDADEQLLVYIPFTQVIKLHSVSIKGPEDEGAMTVKLFANKEHMGFSNVNDFPPSDTVV 453
ESDADEQLL+Y+PF QV+KLHS++IKGPE+EG TVKLF+NKEHMGFSNVND+PPSDT+V
Sbjct: 53 ESDADEQLLIYVPFNQVVKLHSIAIKGPEEEGPKTVKLFSNKEHMGFSNVNDYPPSDTIV 112
Query: 452 LSPDNLKGKPVLLKYVKFQNVRSLTVFIEDNQSGADITKVQKIVFYGSTVETTDMKGLKK 273
LSPD LKGKPV+LKYVKFQNVRSLT+FIEDNQS ++ITKV KI +G+TVETTDMK LKK
Sbjct: 113 LSPDTLKGKPVVLKYVKFQNVRSLTIFIEDNQSDSEITKVHKIALFGTTVETTDMKSLKK 172
Query: 272 IEDH 261
IEDH
Sbjct: 173 IEDH 176
Score = 90.1 bits (222), Expect(2) = 5e-74
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -2
Query: 853 MSTESSSAIYRNQVDLLDFIDWTGVECLNQKPNHSIVNALKQGYREDEGLILESDAD 683
M+ ES++AI R QVDLLDFID++GVECLNQ P+HS+ NA+KQGYRED+GL LESDAD
Sbjct: 1 MAAESATAIPRGQVDLLDFIDFSGVECLNQSPSHSLSNAIKQGYREDDGLNLESDAD 57