BLASTX nr result
ID: Coptis23_contig00012036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00012036
(906 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002522371.1| mRNA, complete cds, clone: rafl24-09-C04, pu... 302 1e-93
emb|CBI34939.3| unnamed protein product [Vitis vinifera] 292 1e-90
ref|XP_002278851.1| PREDICTED: UPF0420 protein C16orf58 homolog ... 292 1e-90
ref|XP_004163622.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 prot... 286 1e-86
ref|XP_004148047.1| PREDICTED: UPF0420 protein C16orf58-like [Cu... 286 1e-86
>ref|XP_002522371.1| mRNA, complete cds, clone: rafl24-09-C04, putative [Ricinus
communis] gi|223538449|gb|EEF40055.1| mRNA, complete
cds, clone: rafl24-09-C04, putative [Ricinus communis]
Length = 523
Score = 302 bits (774), Expect(2) = 1e-93
Identities = 168/298 (56%), Positives = 214/298 (71%), Gaps = 35/298 (11%)
Frame = -2
Query: 887 QSLMQSQTIHLQ--HPWK-KNSHKPN--LIIFPNLKFHKPKTQTFSHSLKTT--YEENRP 729
QS + S + + Q + WK +NSH P+ + L+F PK T ++SL+T+ YE
Sbjct: 2 QSTLYSSSSYTQFHYQWKVQNSHFPSHRKPVSKQLRFSIPKALTLTNSLRTSINYEPEEG 61
Query: 728 FEH-----------LLMVIEKGGKSSKLLWNGTQYEVVSINENVSN-------------- 624
++ L +V+ G+ S+ +W+G+ ++VS++ ++
Sbjct: 62 LDNGPGPGPMFPVRLPVVVRNSGRVSRYMWDGSSVKLVSVDGGAASCVDFEDGYRKLFRA 121
Query: 623 ---QFWDFFIPTGVKENYIEYVKWKFVSRVFSSALQVLATQAMFRAMGVGYARSLPSAAA 453
DFFIP V ENY++YVKWK + RVFSSALQVLATQAMFRA+G+GY+RSLPSAAA
Sbjct: 122 LSLGVRDFFIPKQVTENYMDYVKWKLLHRVFSSALQVLATQAMFRAVGIGYSRSLPSAAA 181
Query: 452 LNWVLKDGLGRLSRCIYTATLASAFDTNLKRVRFSTSIVFSLSIGIELLTPFFPRYFLLL 273
LNWVLKDGLGRLSRCIYTA+LASAFDTNLKRVRFSTSI+FSL IG+ELLTP FP+ FLLL
Sbjct: 182 LNWVLKDGLGRLSRCIYTASLASAFDTNLKRVRFSTSILFSLGIGLELLTPAFPKQFLLL 241
Query: 272 ATVANIAKQISLACYLATGSAVHRSFAEKDNLGALSAKSQTQSVCFDSLGLVLATLLS 99
AT+ANIAKQISLAC+LATGSA+HRSFA DNLG +SAK+Q Q+VCFD+LGL+LA LL+
Sbjct: 242 ATIANIAKQISLACHLATGSAIHRSFAVADNLGEVSAKAQIQTVCFDNLGLMLAALLN 299
Score = 67.8 bits (164), Expect(2) = 1e-93
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = -3
Query: 100 AGLPLVIYPVFSAIDLFGIYQGLKHVHLQTLTK 2
AGLP V+YP+FSAIDLFGIYQGLKHVHLQTLTK
Sbjct: 310 AGLPFVVYPIFSAIDLFGIYQGLKHVHLQTLTK 342
>emb|CBI34939.3| unnamed protein product [Vitis vinifera]
Length = 559
Score = 292 bits (748), Expect(2) = 1e-90
Identities = 159/257 (61%), Positives = 194/257 (75%), Gaps = 29/257 (11%)
Frame = -2
Query: 782 KTQTFSHSLKTTYEENRPFE---------HLLMVIEKGGKSSKLLWNGTQYEV------- 651
KT S+SLKT+ E FE L +VI + G+ S+ LWNG++ +
Sbjct: 77 KTLGSSNSLKTSCEHE--FEGVDGPISTARLPVVIRRWGRVSQYLWNGSESRLQLVRVDG 134
Query: 650 ------VSINENVSNQFW-------DFFIPTGVKENYIEYVKWKFVSRVFSSALQVLATQ 510
++ ++ ++N F DFFIP V NY++YVKWKF+ RVFSSALQVLATQ
Sbjct: 135 GASSLCLNFDDGLNNLFALCSSAVRDFFIPQKVSGNYMDYVKWKFLHRVFSSALQVLATQ 194
Query: 509 AMFRAMGVGYARSLPSAAALNWVLKDGLGRLSRCIYTATLASAFDTNLKRVRFSTSIVFS 330
AMFRA+G+GY+RSLPSAAALNWVLKDGLGRL RCIYTA+LASAFDTNLKRVRFSTS++FS
Sbjct: 195 AMFRAIGIGYSRSLPSAAALNWVLKDGLGRLCRCIYTASLASAFDTNLKRVRFSTSVLFS 254
Query: 329 LSIGIELLTPFFPRYFLLLATVANIAKQISLACYLATGSAVHRSFAEKDNLGALSAKSQT 150
LSIG+ELLTP FP YFLLLAT+ANIAKQ+++ACYLATGSAVHRSFA DNLG +SAK+Q
Sbjct: 255 LSIGVELLTPAFPNYFLLLATIANIAKQVTVACYLATGSAVHRSFAIADNLGEVSAKAQI 314
Query: 149 QSVCFDSLGLVLATLLS 99
Q VCFD+LGL+LA +L+
Sbjct: 315 QMVCFDNLGLMLAAVLN 331
Score = 67.8 bits (164), Expect(2) = 1e-90
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = -3
Query: 100 AGLPLVIYPVFSAIDLFGIYQGLKHVHLQTLTK 2
AGLP V+YP+FSAIDLFGIYQGLKHVHLQTLTK
Sbjct: 342 AGLPFVVYPIFSAIDLFGIYQGLKHVHLQTLTK 374
>ref|XP_002278851.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
Length = 514
Score = 292 bits (748), Expect(2) = 1e-90
Identities = 159/257 (61%), Positives = 194/257 (75%), Gaps = 29/257 (11%)
Frame = -2
Query: 782 KTQTFSHSLKTTYEENRPFE---------HLLMVIEKGGKSSKLLWNGTQYEV------- 651
KT S+SLKT+ E FE L +VI + G+ S+ LWNG++ +
Sbjct: 32 KTLGSSNSLKTSCEHE--FEGVDGPISTARLPVVIRRWGRVSQYLWNGSESRLQLVRVDG 89
Query: 650 ------VSINENVSNQFW-------DFFIPTGVKENYIEYVKWKFVSRVFSSALQVLATQ 510
++ ++ ++N F DFFIP V NY++YVKWKF+ RVFSSALQVLATQ
Sbjct: 90 GASSLCLNFDDGLNNLFALCSSAVRDFFIPQKVSGNYMDYVKWKFLHRVFSSALQVLATQ 149
Query: 509 AMFRAMGVGYARSLPSAAALNWVLKDGLGRLSRCIYTATLASAFDTNLKRVRFSTSIVFS 330
AMFRA+G+GY+RSLPSAAALNWVLKDGLGRL RCIYTA+LASAFDTNLKRVRFSTS++FS
Sbjct: 150 AMFRAIGIGYSRSLPSAAALNWVLKDGLGRLCRCIYTASLASAFDTNLKRVRFSTSVLFS 209
Query: 329 LSIGIELLTPFFPRYFLLLATVANIAKQISLACYLATGSAVHRSFAEKDNLGALSAKSQT 150
LSIG+ELLTP FP YFLLLAT+ANIAKQ+++ACYLATGSAVHRSFA DNLG +SAK+Q
Sbjct: 210 LSIGVELLTPAFPNYFLLLATIANIAKQVTVACYLATGSAVHRSFAIADNLGEVSAKAQI 269
Query: 149 QSVCFDSLGLVLATLLS 99
Q VCFD+LGL+LA +L+
Sbjct: 270 QMVCFDNLGLMLAAVLN 286
Score = 67.8 bits (164), Expect(2) = 1e-90
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = -3
Query: 100 AGLPLVIYPVFSAIDLFGIYQGLKHVHLQTLTK 2
AGLP V+YP+FSAIDLFGIYQGLKHVHLQTLTK
Sbjct: 297 AGLPFVVYPIFSAIDLFGIYQGLKHVHLQTLTK 329
>ref|XP_004163622.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 protein C16orf58-like
[Cucumis sativus]
Length = 523
Score = 286 bits (731), Expect(2) = 1e-86
Identities = 154/287 (53%), Positives = 199/287 (69%), Gaps = 28/287 (9%)
Frame = -2
Query: 872 SQTIHLQHPWK-KNSHKPNLIIFPNLKFHKPKTQTFSHSLKTTYEENRPFE--------- 723
S ++ L PW +H P PN +P+T T SL+T Y + +
Sbjct: 10 SNSLQLSPPWTLPETHLPIANGVPNTLCFRPRTVT--RSLRTCYRADDGIDDGPGPSSPV 67
Query: 722 HLLMVIEKGGKSSKLLWNGTQYEVVSINENVSNQFWDF------------------FIPT 597
L +V+ + G+ S+ +W+G +++ + S+ +DF FIP
Sbjct: 68 RLPLVLRRSGRVSQYVWDGFSLQLIGFDGGASSVSFDFGDGFRTLYRVSVLAVKXFFIPK 127
Query: 596 GVKENYIEYVKWKFVSRVFSSALQVLATQAMFRAMGVGYARSLPSAAALNWVLKDGLGRL 417
V E+Y+ YVKWK + RVFSSALQV+ATQAMFRA+GVG++RSL SAAALNWVLKDGLGRL
Sbjct: 128 NVSEHYVIYVKWKLLHRVFSSALQVIATQAMFRAIGVGHSRSLASAAALNWVLKDGLGRL 187
Query: 416 SRCIYTATLASAFDTNLKRVRFSTSIVFSLSIGIELLTPFFPRYFLLLATVANIAKQISL 237
SRC++TA++ASAFDTNLKRVRFST+++FSLSIG+ELLTP FP+YFLLLA++ANI KQISL
Sbjct: 188 SRCLFTASIASAFDTNLKRVRFSTAVLFSLSIGVELLTPAFPQYFLLLASIANIVKQISL 247
Query: 236 ACYLATGSAVHRSFAEKDNLGALSAKSQTQSVCFDSLGLVLATLLSW 96
CYL+T SAVHRSFA DNLG +SAK+Q QSVCFD+LGLVLA L++
Sbjct: 248 GCYLSTASAVHRSFAVADNLGEVSAKAQIQSVCFDNLGLVLAAFLNF 294
Score = 61.2 bits (147), Expect(2) = 1e-86
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -3
Query: 100 AGLPLVIYPVFSAIDLFGIYQGLKHVHLQTLTK 2
A LP V+YP+F+A+DLFG YQGLKHVHLQTLTK
Sbjct: 304 AALPFVVYPIFAAMDLFGTYQGLKHVHLQTLTK 336
>ref|XP_004148047.1| PREDICTED: UPF0420 protein C16orf58-like [Cucumis sativus]
Length = 523
Score = 286 bits (731), Expect(2) = 1e-86
Identities = 154/287 (53%), Positives = 199/287 (69%), Gaps = 28/287 (9%)
Frame = -2
Query: 872 SQTIHLQHPWK-KNSHKPNLIIFPNLKFHKPKTQTFSHSLKTTYEENRPFE--------- 723
S ++ L PW +H P PN +P+T T SL+T Y + +
Sbjct: 10 SNSLQLSPPWTLPETHLPIANGVPNTLCFRPRTVT--RSLRTCYRADDGIDDGPGPSSPV 67
Query: 722 HLLMVIEKGGKSSKLLWNGTQYEVVSINENVSNQFWDF------------------FIPT 597
L +V+ + G+ S+ +W+G +++ + S+ +DF FIP
Sbjct: 68 RLPLVLRRSGRVSQYVWDGFSLQLIGFDGGASSVSFDFGDGFRTLYRVSVLAVKDFFIPK 127
Query: 596 GVKENYIEYVKWKFVSRVFSSALQVLATQAMFRAMGVGYARSLPSAAALNWVLKDGLGRL 417
V E+Y+ YVKWK + RVFSSALQV+ATQAMFRA+GVG++RSL SAAALNWVLKDGLGRL
Sbjct: 128 NVSEHYVIYVKWKLLHRVFSSALQVIATQAMFRAIGVGHSRSLASAAALNWVLKDGLGRL 187
Query: 416 SRCIYTATLASAFDTNLKRVRFSTSIVFSLSIGIELLTPFFPRYFLLLATVANIAKQISL 237
SRC++TA++ASAFDTNLKRVRFST+++FSLSIG+ELLTP FP+YFLLLA++ANI KQISL
Sbjct: 188 SRCLFTASIASAFDTNLKRVRFSTAVLFSLSIGVELLTPAFPQYFLLLASIANIVKQISL 247
Query: 236 ACYLATGSAVHRSFAEKDNLGALSAKSQTQSVCFDSLGLVLATLLSW 96
CYL+T SAVHRSFA DNLG +SAK+Q QSVCFD+LGLVLA L++
Sbjct: 248 GCYLSTASAVHRSFAVADNLGEVSAKAQIQSVCFDNLGLVLAAFLNF 294
Score = 61.2 bits (147), Expect(2) = 1e-86
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -3
Query: 100 AGLPLVIYPVFSAIDLFGIYQGLKHVHLQTLTK 2
A LP V+YP+F+A+DLFG YQGLKHVHLQTLTK
Sbjct: 304 AALPFVVYPIFAAMDLFGTYQGLKHVHLQTLTK 336