BLASTX nr result

ID: Coptis23_contig00012033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012033
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37239.3| unnamed protein product [Vitis vinifera]              315   2e-83
ref|XP_002267362.2| PREDICTED: uncharacterized protein LOC100261...   291   2e-76
ref|XP_002521155.1| protein binding protein, putative [Ricinus c...   271   2e-70
ref|XP_003520623.1| PREDICTED: uncharacterized protein LOC100794...   262   1e-67
ref|XP_002883938.1| leucine-rich repeat family protein [Arabidop...   261   2e-67

>emb|CBI37239.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  315 bits (806), Expect = 2e-83
 Identities = 175/366 (47%), Positives = 238/366 (65%), Gaps = 2/366 (0%)
 Frame = -1

Query: 1097 MEKVPSLVSLCIEAVSTQILNGDHHYYDLENIFELPSELFDSLITKLPALGLHKLQQHTS 918
            M +VPSL+SLC++ +   IL  D        I+ELPS LFD L+  LP L L KLQ+   
Sbjct: 1    MAEVPSLMSLCMKKLGKDILRDDFGNDLSSAIYELPSVLFDGLLMHLPPLTLQKLQEEMP 60

Query: 917  LSTHCNG--PSNDGFKNGRKRGRYDDDFNTAWKRLFNTRWPERARQIYPADQLLTQGVVG 744
            L    NG   +N  F+NGRKRG   + FNTAWK LF +RWP+ AR+I   D   + GV  
Sbjct: 61   LRCW-NGHESTNICFRNGRKRGSCGN-FNTAWKALFKSRWPDLARKIQRVDW--SAGVAK 116

Query: 743  FEQMSCSSEWHQMYWESHLQECLDHVSEKAVLPSFDGRIGEIAIPGSIMEGIGHKMCMCG 564
            +E +    +W QMYWE+HLQ C+D  +E AVLPSFDG +GEI IP +I++ I +K     
Sbjct: 117  YESII---DWQQMYWETHLQNCIDEAAEIAVLPSFDGGLGEIEIPDTIIKCIVYKGHRSH 173

Query: 563  STCDYSKLHYHCQEYVCYARCLRLQNVLCVSETCDLLKGSKLHSLVLRRIKSQEHVNGVC 384
            ST DYSKL YHC+++  YARCL+LQN+LC++ET  LL+ S+L  LVLR IKS EH++G+C
Sbjct: 174  STRDYSKLSYHCEQFGSYARCLKLQNMLCIAETSHLLRKSRLQQLVLRWIKSSEHMDGLC 233

Query: 383  NLLRQNSETLSVLDFIYCKLPSSAWHAICDSLSTRGLRTHGIKNFSVKASHILENHEVXX 204
             LL+QN+ETLS L+FI+C L S++ +AICDSL  + ++T+ +++FS+  S +LE + +  
Sbjct: 234  QLLQQNNETLSSLEFIFCNLSSASLNAICDSLRVKDMQTYRVQHFSI-TSTVLERNPLSL 292

Query: 203  XXXXXXXXXXXXXXXXLNLCDNHLGPNFAKLVFDTLLGVSSGLSILDLSENNISGWLSSF 24
                            L   DN LG NFAKLVF+TLL  SS LS L+  +NNI+GWL +F
Sbjct: 293  PHGLVSFLSSGRSLCSLKFSDNRLGKNFAKLVFNTLLDASSRLSTLNFEDNNITGWLFNF 352

Query: 23   TGKFSS 6
              + S+
Sbjct: 353  NQRSST 358


>ref|XP_002267362.2| PREDICTED: uncharacterized protein LOC100261775 [Vitis vinifera]
          Length = 834

 Score =  291 bits (746), Expect = 2e-76
 Identities = 163/335 (48%), Positives = 218/335 (65%), Gaps = 2/335 (0%)
 Frame = -1

Query: 1004 IFELPSELFDSLITKLPALGLHKLQQHTSLSTHCNG--PSNDGFKNGRKRGRYDDDFNTA 831
            I+ELPS LFD L+  LP L L KLQ+   L    NG   +N  F+NGRKRG   + FNTA
Sbjct: 87   IYELPSVLFDGLLMHLPPLTLQKLQEEMPLRCW-NGHESTNICFRNGRKRGSCGN-FNTA 144

Query: 830  WKRLFNTRWPERARQIYPADQLLTQGVVGFEQMSCSSEWHQMYWESHLQECLDHVSEKAV 651
            WK LF +RWP+ AR+I   D   + GV  +E +    +W QMYWE+HLQ C+D  +E AV
Sbjct: 145  WKALFKSRWPDLARKIQRVDW--SAGVAKYESII---DWQQMYWETHLQNCIDEAAEIAV 199

Query: 650  LPSFDGRIGEIAIPGSIMEGIGHKMCMCGSTCDYSKLHYHCQEYVCYARCLRLQNVLCVS 471
            LPSFDG +GEI IPG       H+     ST DYSKL YHC+++  YARCL+LQN+LC++
Sbjct: 200  LPSFDGGLGEIEIPG-------HRS---HSTRDYSKLSYHCEQFGSYARCLKLQNMLCIA 249

Query: 470  ETCDLLKGSKLHSLVLRRIKSQEHVNGVCNLLRQNSETLSVLDFIYCKLPSSAWHAICDS 291
            ET  LL+ S+L  LVLR IKS EH++G+C LL+QN+ETLS L+FI+C L S++ +AICDS
Sbjct: 250  ETSHLLRKSRLQQLVLRWIKSSEHMDGLCQLLQQNNETLSSLEFIFCNLSSASLNAICDS 309

Query: 290  LSTRGLRTHGIKNFSVKASHILENHEVXXXXXXXXXXXXXXXXXXLNLCDNHLGPNFAKL 111
            L  + ++T+ +++FS+  S +LE + +                  L   DN LG NFAKL
Sbjct: 310  LRVKDMQTYRVQHFSI-TSTVLERNPLSLPHGLVSFLSSGRSLCSLKFSDNRLGKNFAKL 368

Query: 110  VFDTLLGVSSGLSILDLSENNISGWLSSFTGKFSS 6
            VF+TLL  SS LS L+  +NNI+GWL +F  + S+
Sbjct: 369  VFNTLLDASSRLSTLNFEDNNITGWLFNFNQRSST 403


>ref|XP_002521155.1| protein binding protein, putative [Ricinus communis]
            gi|223539724|gb|EEF41306.1| protein binding protein,
            putative [Ricinus communis]
          Length = 598

 Score =  271 bits (693), Expect = 2e-70
 Identities = 162/357 (45%), Positives = 207/357 (57%), Gaps = 4/357 (1%)
 Frame = -1

Query: 1064 IEAVSTQILNGDHHYYDLENIFELPSELFDSLITKLPALGLHKLQQH----TSLSTHCNG 897
            +EA+  Q+++GD     L  I+E+PS LF  L+TKLP L LH LQ       S    C+ 
Sbjct: 1    MEAIKRQLISGDDVLM-LAEIYEIPSHLFSILVTKLPPLALHNLQMEMPYENSNGYECSD 59

Query: 896  PSNDGFKNGRKRGRYDDDFNTAWKRLFNTRWPERARQIYPADQLLTQGVVGFEQMSCSSE 717
              +   K GRKRGR    FNT WK LF  RWP    QI   D +             S  
Sbjct: 60   GGDGCSKIGRKRGR-SCKFNTEWKTLFKLRWP----QIVDTDSVE------------SDN 102

Query: 716  WHQMYWESHLQECLDHVSEKAVLPSFDGRIGEIAIPGSIMEGIGHKMCMCGSTCDYSKLH 537
            WHQ YWE HLQ CLD  +  +++ SFDG IGEI +P  I++ IG +  +  S   YSKL 
Sbjct: 103  WHQAYWEKHLQNCLDEAAGSSMV-SFDGCIGEIKVPDYILKWIGCEGHLNHSI--YSKLS 159

Query: 536  YHCQEYVCYARCLRLQNVLCVSETCDLLKGSKLHSLVLRRIKSQEHVNGVCNLLRQNSET 357
            YH Q+   YARCLRLQNVLCV+ETC LL+ S+L +L LR I+SQEHV+G+C LL QN ET
Sbjct: 160  YHFQQLGHYARCLRLQNVLCVAETCQLLRNSQLQNLALRWIRSQEHVDGLCQLLIQNRET 219

Query: 356  LSVLDFIYCKLPSSAWHAICDSLSTRGLRTHGIKNFSVKASHILENHEVXXXXXXXXXXX 177
            L+ L+F++CKL S+   AIC SL  +  +THGIKNFS++ S  LE   V           
Sbjct: 220  LTSLEFVHCKLSSTFVDAICRSLEIKDKQTHGIKNFSIRTSIFLETDLVSLPPSLVSFLS 279

Query: 176  XXXXXXXLNLCDNHLGPNFAKLVFDTLLGVSSGLSILDLSENNISGWLSSFTGKFSS 6
                   L    NHL   FA+++F  L   SS +S+LDLS+N I+GWLS+F    SS
Sbjct: 280  SGRSLCSLRFSGNHLDRKFARILFTLLFDDSSNISVLDLSDNIIAGWLSNFNRGSSS 336


>ref|XP_003520623.1| PREDICTED: uncharacterized protein LOC100794405 [Glycine max]
          Length = 604

 Score =  262 bits (670), Expect = 1e-67
 Identities = 154/364 (42%), Positives = 209/364 (57%)
 Frame = -1

Query: 1094 EKVPSLVSLCIEAVSTQILNGDHHYYDLENIFELPSELFDSLITKLPALGLHKLQQHTSL 915
            E  PSL+S+CI+A++ Q+L        L  I++LPS L D+LIT+LP L L     H   
Sbjct: 3    EAPPSLLSVCIDALTQQLLRPCDDDL-LPCIYDLPSHLLDTLITRLPPLALRTFHHHLPF 61

Query: 914  STHCNGPSNDGFKNGRKRGRYDDDFNTAWKRLFNTRWPERARQIYPADQLLTQGVVGFEQ 735
                 G S+D     RKR R D + N+AW+RLF  RWP+R +QI+  D            
Sbjct: 62   DEE--GFSHDDSTKKRKRAR-DWNLNSAWQRLFQLRWPDRVKQIHRTD------------ 106

Query: 734  MSCSSEWHQMYWESHLQECLDHVSEKAVLPSFDGRIGEIAIPGSIMEGIGHKMCMCGSTC 555
                  W Q+YWE+HLQ+CLD   E A++PSF G IG+I I  SI++ IG       STC
Sbjct: 107  ------WEQLYWETHLQDCLDEAVEVALIPSFTGYIGDIQISDSILKYIGFVGNTNHSTC 160

Query: 554  DYSKLHYHCQEYVCYARCLRLQNVLCVSETCDLLKGSKLHSLVLRRIKSQEHVNGVCNLL 375
            D+SKL YHC ++  +  CL LQNVLC +ET  LL+  KL SLVLR I+S+E ++G+C LL
Sbjct: 161  DHSKLSYHCLQFGSHVSCLGLQNVLCTAETSVLLRECKLQSLVLRCIRSKEQIDGLCKLL 220

Query: 374  RQNSETLSVLDFIYCKLPSSAWHAICDSLSTRGLRTHGIKNFSVKASHILENHEVXXXXX 195
             Q+  TL+ L+F++C L +   +AI  SL    ++ HGI++ S+ A+  LE   V     
Sbjct: 221  AQHCRTLTSLEFVHCALSTDFINAIFGSLVIERVQKHGIQHLSIIATSFLEPCTVSLPSG 280

Query: 194  XXXXXXXXXXXXXLNLCDNHLGPNFAKLVFDTLLGVSSGLSILDLSENNISGWLSSFTGK 15
                         L L +NH G  FAK +F TLL +SSG+S+LDLS N ISGWL  +   
Sbjct: 281  LVSFLSSGRSLCSLKLSENHHGWTFAKDLFVTLLNLSSGISVLDLSRNRISGWLFYYRRS 340

Query: 14   FSSS 3
             S S
Sbjct: 341  LSGS 344


>ref|XP_002883938.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329778|gb|EFH60197.1| leucine-rich repeat family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 603

 Score =  261 bits (667), Expect = 2e-67
 Identities = 151/362 (41%), Positives = 209/362 (57%), Gaps = 3/362 (0%)
 Frame = -1

Query: 1097 MEKVPSLVSLCIEAVSTQILNGDHHYYDLENIFELPSELFDSLITKLPALGLHKLQQHTS 918
            M K PSL  LCI+++  Q+L+ D+   DL   +ELPSEL D++I  LPAL L   Q  T+
Sbjct: 1    MTKAPSLAFLCIQSLKLQLLDSDNPIPDL---YELPSELLDAVIAHLPALALQNFQ--TN 55

Query: 917  LSTHCNGPSNDG---FKNGRKRGRYDDDFNTAWKRLFNTRWPERARQIYPADQLLTQGVV 747
            +  +C      G     NGRKR   +D   ++WK LF  RWP+                 
Sbjct: 56   MPFNCLDDYESGDDCLINGRKRSSRNDPLGSSWKMLFKLRWPDFV--------------- 100

Query: 746  GFEQMSCSSEWHQMYWESHLQECLDHVSEKAVLPSFDGRIGEIAIPGSIMEGIGHKMCMC 567
              +++   ++W Q+YWE HLQ C+D  +E A+ P+F GRI  I +  +I+  I H+  M 
Sbjct: 101  --DRVESPADWQQLYWEKHLQNCVDEAAEVALRPTFSGRIRSINVSDNILRYICHEEHMS 158

Query: 566  GSTCDYSKLHYHCQEYVCYARCLRLQNVLCVSETCDLLKGSKLHSLVLRRIKSQEHVNGV 387
               C   +L +H Q +  Y RCLRL NVLCV+ET +LL  SKL SLVLR I+S++HV  +
Sbjct: 159  CQKCVCKELSFHFQTFGPYLRCLRLLNVLCVTETSELLMTSKLQSLVLRWIRSEKHVEPL 218

Query: 386  CNLLRQNSETLSVLDFIYCKLPSSAWHAICDSLSTRGLRTHGIKNFSVKASHILENHEVX 207
            C LL Q  +TL+ L+FI+CKL SS+  AIC SL  +G+ T G++ F +K S I E   + 
Sbjct: 219  CKLLIQTRDTLTSLEFIHCKLSSSSISAICASLHEKGIHTTGMQRFCIKTSSI-EIDPLA 277

Query: 206  XXXXXXXXXXXXXXXXXLNLCDNHLGPNFAKLVFDTLLGVSSGLSILDLSENNISGWLSS 27
                             L+ CD++L  + A++VF TLL  SS LS LDLSENNISGWLS+
Sbjct: 278  APSAFVSFLMSVRTLHSLHFCDSNLDRHIARMVFSTLLDSSSNLSSLDLSENNISGWLST 337

Query: 26   FT 21
            F+
Sbjct: 338  FS 339


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