BLASTX nr result

ID: Coptis23_contig00012030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012030
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28516.3| unnamed protein product [Vitis vinifera]              316   3e-84
ref|XP_002263114.1| PREDICTED: AP-1 complex subunit sigma-2-like...   316   3e-84
emb|CBI22701.3| unnamed protein product [Vitis vinifera]              315   8e-84
ref|XP_002269251.1| PREDICTED: AP-1 complex subunit sigma-1 [Vit...   314   1e-83
ref|XP_002514388.1| clathrin coat assembly protein ap19, putativ...   312   4e-83

>emb|CBI28516.3| unnamed protein product [Vitis vinifera]
          Length = 178

 Score =  316 bits (810), Expect = 3e-84
 Identities = 156/161 (96%), Positives = 160/161 (99%)
 Frame = -3

Query: 701 MIHFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 522
           MIHFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK
Sbjct: 18  MIHFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 77

Query: 521 RYASLYFCMCIDQEDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 342
           RYASLYFCMCIDQ+DNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYY+LDE+LIA
Sbjct: 78  RYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYVLDELLIA 137

Query: 341 GELQETSKKTVARLIAAQDSLVETAKEEAGSISNIIAQATK 219
           GELQE+SKKTVARLIAAQDSLVETAKEEA SISNIIAQATK
Sbjct: 138 GELQESSKKTVARLIAAQDSLVETAKEEASSISNIIAQATK 178


>ref|XP_002263114.1| PREDICTED: AP-1 complex subunit sigma-2-like [Vitis vinifera]
          Length = 161

 Score =  316 bits (810), Expect = 3e-84
 Identities = 156/161 (96%), Positives = 160/161 (99%)
 Frame = -3

Query: 701 MIHFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 522
           MIHFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60

Query: 521 RYASLYFCMCIDQEDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 342
           RYASLYFCMCIDQ+DNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYY+LDE+LIA
Sbjct: 61  RYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYVLDELLIA 120

Query: 341 GELQETSKKTVARLIAAQDSLVETAKEEAGSISNIIAQATK 219
           GELQE+SKKTVARLIAAQDSLVETAKEEA SISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEEASSISNIIAQATK 161


>emb|CBI22701.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score =  315 bits (806), Expect = 8e-84
 Identities = 159/177 (89%), Positives = 166/177 (93%), Gaps = 5/177 (2%)
 Frame = -3

Query: 734 FSSIISSHRY-----EMIHFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGP 570
           F  +IS+H        MIHFVLLISRQGKVRLTKWYSPY+QKERTKVIRELSGVILTRGP
Sbjct: 14  FLLLISAHSEFDPLEAMIHFVLLISRQGKVRLTKWYSPYTQKERTKVIRELSGVILTRGP 73

Query: 569 KLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEVLEIIHHFVEILDRYFGSVCELDLI 390
           KLCNFVEWRGYKVVYKRYASLYFCMCIDQ+DNELEVLEIIHH+VEILDRYFGSVCELDLI
Sbjct: 74  KLCNFVEWRGYKVVYKRYASLYFCMCIDQDDNELEVLEIIHHYVEILDRYFGSVCELDLI 133

Query: 389 FNFHKAYYILDEILIAGELQETSKKTVARLIAAQDSLVETAKEEAGSISNIIAQATK 219
           FNFHKAYYILDE+LIAGELQE+SKKTVARLIAAQDSLVETAKEEA SISNIIAQATK
Sbjct: 134 FNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEEASSISNIIAQATK 190


>ref|XP_002269251.1| PREDICTED: AP-1 complex subunit sigma-1 [Vitis vinifera]
           gi|147853756|emb|CAN79566.1| hypothetical protein
           VITISV_017884 [Vitis vinifera]
          Length = 161

 Score =  314 bits (805), Expect = 1e-83
 Identities = 155/161 (96%), Positives = 160/161 (99%)
 Frame = -3

Query: 701 MIHFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 522
           MIHFVLLISRQGKVRLTKWYSPY+QKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60

Query: 521 RYASLYFCMCIDQEDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 342
           RYASLYFCMCIDQ+DNELEVLEIIHH+VEILDRYFGSVCELDLIFNFHKAYYILDE+LIA
Sbjct: 61  RYASLYFCMCIDQDDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 341 GELQETSKKTVARLIAAQDSLVETAKEEAGSISNIIAQATK 219
           GELQE+SKKTVARLIAAQDSLVETAKEEA SISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEEASSISNIIAQATK 161


>ref|XP_002514388.1| clathrin coat assembly protein ap19, putative [Ricinus communis]
           gi|223546485|gb|EEF47984.1| clathrin coat assembly
           protein ap19, putative [Ricinus communis]
          Length = 161

 Score =  312 bits (800), Expect = 4e-83
 Identities = 155/161 (96%), Positives = 159/161 (98%)
 Frame = -3

Query: 701 MIHFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 522
           MI FVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK
Sbjct: 1   MIQFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60

Query: 521 RYASLYFCMCIDQEDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 342
           RYASLYFCMCIDQ+DNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDE+LIA
Sbjct: 61  RYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 341 GELQETSKKTVARLIAAQDSLVETAKEEAGSISNIIAQATK 219
           GELQE+SKKTVARLIAAQDSLVETAKE+A SISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161


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