BLASTX nr result

ID: Coptis23_contig00012024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012024
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281575.1| PREDICTED: protein IN2-1 homolog B-like [Vit...   110   4e-47
emb|CBI25324.3| unnamed protein product [Vitis vinifera]              108   1e-46
gb|AFF18808.1| glutathione S-transferase, partial [Dimocarpus lo...   105   7e-45
ref|XP_003632205.1| PREDICTED: protein IN2-1 homolog B-like [Vit...   103   7e-44
ref|XP_002312053.1| predicted protein [Populus trichocarpa] gi|2...   102   7e-44

>ref|XP_002281575.1| PREDICTED: protein IN2-1 homolog B-like [Vitis vinifera]
          Length = 303

 Score =  110 bits (274), Expect(2) = 4e-47
 Identities = 61/107 (57%), Positives = 64/107 (59%)
 Frame = +2

Query: 50  APMATGRSVQAVLPPALDSTSAPPSLFDGTTXXXXXXXXXXXXXXXXXXXXNSTSDQPPL 229
           A MATG SV+ VLPPALDSTS P                                  PPL
Sbjct: 65  AAMATG-SVREVLPPALDSTSEP----------------------------------PPL 89

Query: 230 FDGTTRLYVSYTCPYAQRAWIARNSKGLQDKIKLVAIDLNNRPAWYK 370
           FDGTTRLY+SYTCPYAQR WI RN KGLQ+KIKLV IDL NRPAWYK
Sbjct: 90  FDGTTRLYISYTCPYAQRVWITRNCKGLQEKIKLVPIDLQNRPAWYK 136



 Score =  103 bits (258), Expect(2) = 4e-47
 Identities = 46/51 (90%), Positives = 50/51 (98%)
 Frame = +1

Query: 472 WYKEKVYPANKVPSLEHNNEVKGESLDLIRYIDSHFEGPALLPDDPSKREF 624
           WYKEKVYPANKVPSLEHNNEVKGESLDLI+YIDS+FEGP+L PDDP+KREF
Sbjct: 134 WYKEKVYPANKVPSLEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPAKREF 184


>emb|CBI25324.3| unnamed protein product [Vitis vinifera]
          Length = 237

 Score =  108 bits (271), Expect(2) = 1e-46
 Identities = 60/105 (57%), Positives = 63/105 (60%)
 Frame = +2

Query: 56  MATGRSVQAVLPPALDSTSAPPSLFDGTTXXXXXXXXXXXXXXXXXXXXNSTSDQPPLFD 235
           MATG SV+ VLPPALDSTS P                                  PPLFD
Sbjct: 1   MATG-SVREVLPPALDSTSEP----------------------------------PPLFD 25

Query: 236 GTTRLYVSYTCPYAQRAWIARNSKGLQDKIKLVAIDLNNRPAWYK 370
           GTTRLY+SYTCPYAQR WI RN KGLQ+KIKLV IDL NRPAWYK
Sbjct: 26  GTTRLYISYTCPYAQRVWITRNCKGLQEKIKLVPIDLQNRPAWYK 70



 Score =  103 bits (258), Expect(2) = 1e-46
 Identities = 46/51 (90%), Positives = 50/51 (98%)
 Frame = +1

Query: 472 WYKEKVYPANKVPSLEHNNEVKGESLDLIRYIDSHFEGPALLPDDPSKREF 624
           WYKEKVYPANKVPSLEHNNEVKGESLDLI+YIDS+FEGP+L PDDP+KREF
Sbjct: 68  WYKEKVYPANKVPSLEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPAKREF 118


>gb|AFF18808.1| glutathione S-transferase, partial [Dimocarpus longan]
          Length = 127

 Score =  105 bits (261), Expect(2) = 7e-45
 Identities = 46/56 (82%), Positives = 50/56 (89%)
 Frame = +2

Query: 203 NSTSDQPPLFDGTTRLYVSYTCPYAQRAWIARNSKGLQDKIKLVAIDLNNRPAWYK 370
           +STS+ PP+FDGTTRLY+SYTCPYAQR WI RNSKGLQDKIKLV IDL NRP WYK
Sbjct: 6   DSTSEPPPIFDGTTRLYISYTCPYAQRVWITRNSKGLQDKIKLVPIDLKNRPDWYK 61



 Score =  101 bits (252), Expect(2) = 7e-45
 Identities = 44/51 (86%), Positives = 49/51 (96%)
 Frame = +1

Query: 472 WYKEKVYPANKVPSLEHNNEVKGESLDLIRYIDSHFEGPALLPDDPSKREF 624
           WYKEKVYP NKVPSLEHNNEVKGESLDLI+YIDSHFEGP+L P+DP+K+EF
Sbjct: 59  WYKEKVYPPNKVPSLEHNNEVKGESLDLIKYIDSHFEGPSLFPNDPAKKEF 109


>ref|XP_003632205.1| PREDICTED: protein IN2-1 homolog B-like [Vitis vinifera]
          Length = 286

 Score =  103 bits (258), Expect(2) = 7e-44
 Identities = 47/56 (83%), Positives = 49/56 (87%)
 Frame = +2

Query: 203 NSTSDQPPLFDGTTRLYVSYTCPYAQRAWIARNSKGLQDKIKLVAIDLNNRPAWYK 370
           +STS+ PPLFDGTTRLY SY CPYAQR WIARN KGLQDKIKLV IDL NRPAWYK
Sbjct: 65  DSTSEPPPLFDGTTRLYTSYICPYAQRVWIARNYKGLQDKIKLVPIDLGNRPAWYK 120



 Score = 99.4 bits (246), Expect(2) = 7e-44
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = +1

Query: 472 WYKEKVYPANKVPSLEHNNEVKGESLDLIRYIDSHFEGPALLPDDPSKREF 624
           WYKEKVYP NKVPSLEHNN+V GESLDLI+YIDSHFEGP+L PDDP+KR+F
Sbjct: 118 WYKEKVYPENKVPSLEHNNKVTGESLDLIKYIDSHFEGPSLYPDDPNKRQF 168


>ref|XP_002312053.1| predicted protein [Populus trichocarpa] gi|222851873|gb|EEE89420.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  102 bits (254), Expect(2) = 7e-44
 Identities = 44/51 (86%), Positives = 49/51 (96%)
 Frame = +1

Query: 472 WYKEKVYPANKVPSLEHNNEVKGESLDLIRYIDSHFEGPALLPDDPSKREF 624
           WYKEKVYP NKVPSLEHNNEVKGESLDLI+YIDSHF+GP+L PDDP+K+EF
Sbjct: 60  WYKEKVYPPNKVPSLEHNNEVKGESLDLIKYIDSHFDGPSLFPDDPAKKEF 110



 Score =  100 bits (250), Expect(2) = 7e-44
 Identities = 44/55 (80%), Positives = 48/55 (87%)
 Frame = +2

Query: 206 STSDQPPLFDGTTRLYVSYTCPYAQRAWIARNSKGLQDKIKLVAIDLNNRPAWYK 370
           S S+ PP+FDGTTRLY+SYTCPYAQR WI RN KGLQDKIKLV IDL +RPAWYK
Sbjct: 8   SNSEPPPVFDGTTRLYISYTCPYAQRVWITRNCKGLQDKIKLVPIDLQDRPAWYK 62


Top