BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012021
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136720.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11
ref|XP_003559314.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10
emb|CBI39664.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]    66   3e-09

>ref|XP_004136720.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Cucumis sativus]
           gi|449501182|ref|XP_004161300.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g63330-like [Cucumis sativus]
          Length = 728

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/86 (46%), Positives = 50/86 (58%)
 Frame = +1

Query: 10  TLNKLVSKTGLFSLAINKMLIHGLVKEGHKRDACKLLDHMLDNGWVPDAVTHSLLIXXXX 189
           T++KLV+ T L + A   +LI+GL KE  K +ACKLLD ML+ GWVPDA TH LLI    
Sbjct: 638 TIDKLVTHTDLVNTATYNLLINGLWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLF 697

Query: 190 XXXXXXXXXXXXCSEVPDKVSIILVD 267
                        S + D VS ILV+
Sbjct: 698 QEKTGDKVLISENSAIEDNVSSILVE 723


>ref|XP_003559314.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 495

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/56 (53%), Positives = 43/56 (76%)
 Frame = +1

Query: 10  TLNKLVSKTGLFSLAINKMLIHGLVKEGHKRDACKLLDHMLDNGWVPDAVTHSLLI 177
           +L K+V+  G+ S  I+ ++I+GL+KEG K +ACK LD MLD GWVPD+ THS+L+
Sbjct: 360 SLLKVVNIDGVMSPRISNIIIYGLIKEGFKNEACKFLDQMLDKGWVPDSKTHSVLV 415


>emb|CBI39664.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/94 (37%), Positives = 52/94 (55%)
 Frame = +1

Query: 1   VVYTLNKLVSKTGLFSLAINKMLIHGLVKEGHKRDACKLLDHMLDNGWVPDAVTHSLLIX 180
           ++  + KL S   + + ++  +LI GL+KEG+K +AC+LLD ML+ GWVPDA TH LLI 
Sbjct: 419 ILTAIGKLASDGEILNSSMYNLLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIG 478

Query: 181 XXXXXXXXXXXXXXXCSEVPDKVSIILVDSFLDT 282
                           S + DK+  IL +   +T
Sbjct: 479 SVVSEVPHKEAVEYENSCMQDKIGNILAEGLRET 512


>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62590-like [Vitis vinifera]
          Length = 730

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/94 (37%), Positives = 52/94 (55%)
 Frame = +1

Query: 1   VVYTLNKLVSKTGLFSLAINKMLIHGLVKEGHKRDACKLLDHMLDNGWVPDAVTHSLLIX 180
           ++  + KL S   + + ++  +LI GL+KEG+K +AC+LLD ML+ GWVPDA TH LLI 
Sbjct: 637 ILTAIGKLASDGEILNSSMYNLLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIG 696

Query: 181 XXXXXXXXXXXXXXXCSEVPDKVSIILVDSFLDT 282
                           S + DK+  IL +   +T
Sbjct: 697 SVVSEVPHKEAVEYENSCMQDKIGNILAEGLRET 730


>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/94 (37%), Positives = 52/94 (55%)
 Frame = +1

Query: 1   VVYTLNKLVSKTGLFSLAINKMLIHGLVKEGHKRDACKLLDHMLDNGWVPDAVTHSLLIX 180
           ++  + KL S   + + ++  +LI GL+KEG+K +AC+LLD ML+ GWVPDA TH LLI 
Sbjct: 637 ILTAIGKLASDGEILNSSMYNLLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIG 696

Query: 181 XXXXXXXXXXXXXXXCSEVPDKVSIILVDSFLDT 282
                           S + DK+  IL +   +T
Sbjct: 697 SVVSEVPHKEAVEYENSCMQDKIGNILAEGLRET 730